RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 RBM33Q96EV2 1170 aaKnown RBP10.72□□□□□ -0.69
RN7SKP248-201ENST00000516278 MAP3K7O43318 606 aa10.71□□□□□ -0.69
RN7SKP248-201ENST00000516278 C6orf132Q5T0Z8 1188 aa10.71□□□□□ -0.69
RN7SKP248-201ENST00000516278 PRIM1P49642 420 aaKnown RBP10.69□□□□□ -0.7
RN7SKP248-201ENST00000516278 POTEEQ6S8J3 1075 aa10.69□□□□□ -0.7
RN7SKP248-201ENST00000516278 KCNK17Q96T54 332 aa10.68□□□□□ -0.7
RN7SKP248-201ENST00000516278 AXIN2Q9Y2T1 843 aa10.67□□□□□ -0.7
RN7SKP248-201ENST00000516278 PSEN2P49810 448 aa10.65□□□□□ -0.7
RN7SKP248-201ENST00000516278 TSR1Q2NL82 804 aaKnown RBP10.65□□□□□ -0.7
RN7SKP248-201ENST00000516278 RBM26Q5T8P6 1007 aaKnown RBP10.65□□□□□ -0.7
RN7SKP248-201ENST00000516278 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.65□□□□□ -0.7
RN7SKP248-201ENST00000516278 CERKQ8TCT0 537 aa10.65□□□□□ -0.7
RN7SKP248-201ENST00000516278 PPP1R3GB7ZBB8 358 aa10.64□□□□□ -0.71
RN7SKP248-201ENST00000516278 NUTM2FA1L443 756 aa10.63□□□□□ -0.71
RN7SKP248-201ENST00000516278 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
RN7SKP248-201ENST00000516278 KRTAP3-2Q9BYR7 98 aa10.63□□□□□ -0.71
RN7SKP248-201ENST00000516278 LSM11P83369 360 aaKnown RBP eCLIP10.62□□□□□ -0.71
RN7SKP248-201ENST00000516278 SLC4A5Q9BY07 1137 aa10.62□□□□□ -0.71
RN7SKP248-201ENST00000516278 COL9A1P20849 921 aa10.61□□□□□ -0.71
RN7SKP248-201ENST00000516278 DMRTA1Q5VZB9 504 aa10.61□□□□□ -0.71
RN7SKP248-201ENST00000516278 TK2O00142 265 aa10.6□□□□□ -0.71
RN7SKP248-201ENST00000516278 LMOD2Q6P5Q4 547 aa10.59□□□□□ -0.71
RN7SKP248-201ENST00000516278 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
RN7SKP248-201ENST00000516278 ZBED2Q9BTP6 218 aa10.59□□□□□ -0.71
RN7SKP248-201ENST00000516278 CDHR5Q9HBB8 845 aa10.59□□□□□ -0.71
RN7SKP248-201ENST00000516278 NPDC1Q9NQX5 325 aaPredicted RBP10.59□□□□□ -0.71
RN7SKP248-201ENST00000516278 ONECUT3O60422 494 aaPredicted RBP10.58□□□□□ -0.72
RN7SKP248-201ENST00000516278 FCHSD2O94868 740 aa10.58□□□□□ -0.72
RN7SKP248-201ENST00000516278 PTGDRQ13258 359 aa10.58□□□□□ -0.72
RN7SKP248-201ENST00000516278 GPIHBP1Q8IV16 184 aa10.57□□□□□ -0.72
RN7SKP248-201ENST00000516278 PRSS12P56730 875 aa10.56□□□□□ -0.72
RN7SKP248-201ENST00000516278 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
RN7SKP248-201ENST00000516278 ADGRD1Q6QNK2 874 aa10.55□□□□□ -0.72
RN7SKP248-201ENST00000516278 RBM27Q9P2N5 1060 aaKnown RBP10.55□□□□□ -0.72
RN7SKP248-201ENST00000516278 HIC1Q14526 733 aa10.54□□□□□ -0.72
RN7SKP248-201ENST00000516278 CDCA7LQ96GN5 454 aa10.54□□□□□ -0.72
RN7SKP248-201ENST00000516278 TRIM6-TRIM34B2RNG4 842 aa10.53□□□□□ -0.72
RN7SKP248-201ENST00000516278 PROX2Q3B8N5 592 aa10.52□□□□□ -0.73
RN7SKP248-201ENST00000516278 PACS2Q86VP3 889 aa10.52□□□□□ -0.73
RN7SKP248-201ENST00000516278 RABGEF1Q9UJ41 708 aa10.52□□□□□ -0.73
RN7SKP248-201ENST00000516278 GNPATO15228 680 aa10.51□□□□□ -0.73
RN7SKP248-201ENST00000516278 GPR37O15354 613 aa10.5□□□□□ -0.73
RN7SKP248-201ENST00000516278 HRO43593 1189 aa10.5□□□□□ -0.73
RN7SKP248-201ENST00000516278 TTC13Q8NBP0 860 aa10.5□□□□□ -0.73
RN7SKP248-201ENST00000516278 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
RN7SKP248-201ENST00000516278 PADI6Q6TGC4 694 aa10.49□□□□□ -0.73
RN7SKP248-201ENST00000516278 STAC3Q96MF2 364 aa10.49□□□□□ -0.73
RN7SKP248-201ENST00000516278 TSKSQ9UJT2 592 aa10.49□□□□□ -0.73
RN7SKP248-201ENST00000516278 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
RN7SKP248-201ENST00000516278 NBPF3Q9H094 633 aa10.48□□□□□ -0.73
RN7SKP248-201ENST00000516278 ZC3H15Q8WU90 426 aaKnown RBP10.47□□□□□ -0.73
RN7SKP248-201ENST00000516278 FAM198AQ9UFP1 575 aa10.46□□□□□ -0.73
RN7SKP248-201ENST00000516278 NBPF26B4DH59 902 aa10.44□□□□□ -0.74
RN7SKP248-201ENST00000516278 LAPTM4BQ86VI4 370 aa10.44□□□□□ -0.74
RN7SKP248-201ENST00000516278 SPNS2Q8IVW8 549 aa10.44□□□□□ -0.74
RN7SKP248-201ENST00000516278 MRPL50Q8N5N7 158 aaKnown RBP10.44□□□□□ -0.74
RN7SKP248-201ENST00000516278 TATDN2Q93075 761 aa10.44□□□□□ -0.74
RN7SKP248-201ENST00000516278 ZMYND10O75800 440 aa10.43□□□□□ -0.74
RN7SKP248-201ENST00000516278 FECHP22830 423 aa10.43□□□□□ -0.74
RN7SKP248-201ENST00000516278 HRCP23327 699 aa10.42□□□□□ -0.74
RN7SKP248-201ENST00000516278 OATP04181 439 aa10.41□□□□□ -0.74
RN7SKP248-201ENST00000516278 BARGINQ6ZT62 677 aa10.41□□□□□ -0.74
RN7SKP248-201ENST00000516278 NUDT18Q6ZVK8 323 aa10.41□□□□□ -0.74
RN7SKP248-201ENST00000516278 PNMA3Q9UL41 463 aa10.41□□□□□ -0.74
RN7SKP248-201ENST00000516278 MINK1Q8N4C8 1332 aaPredicted RBP10.4□□□□□ -0.74
RN7SKP248-201ENST00000516278 MAP2K5Q13163 448 aa10.4□□□□□ -0.74
RN7SKP248-201ENST00000516278 FAM98CQ17RN3 349 aaKnown RBP10.4□□□□□ -0.74
RN7SKP248-201ENST00000516278 RBM46Q8TBY0 533 aaKnown RBP10.4□□□□□ -0.74
RN7SKP248-201ENST00000516278 ADGRG1Q9Y653 693 aa10.4□□□□□ -0.74
RN7SKP248-201ENST00000516278 GOLGA8CPA6NN73 597 aa10.39□□□□□ -0.75
RN7SKP248-201ENST00000516278 EYA1Q99502 592 aa10.39□□□□□ -0.75
RN7SKP248-201ENST00000516278 MYT1LQ9UL68 1186 aa10.39□□□□□ -0.75
RN7SKP248-201ENST00000516278 IRF6O14896 467 aa10.38□□□□□ -0.75
RN7SKP248-201ENST00000516278 KRI1Q8N9T8 703 aaKnown RBP10.38□□□□□ -0.75
RN7SKP248-201ENST00000516278 SEPT9Q9UHD8 586 aaPredicted RBP10.38□□□□□ -0.75
RN7SKP248-201ENST00000516278 C3orf80F5H4A9 247 aa10.37□□□□□ -0.75
RN7SKP248-201ENST00000516278 SMAPO00193 183 aa10.37□□□□□ -0.75
RN7SKP248-201ENST00000516278 ZFRQ96KR1 1074 aaKnown RBP10.36□□□□□ -0.75
RN7SKP248-201ENST00000516278 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
RN7SKP248-201ENST00000516278 HDGFP51858 240 aaKnown RBP10.34□□□□□ -0.75
RN7SKP248-201ENST00000516278 MYT1Q01538 1121 aa10.34□□□□□ -0.75
RN7SKP248-201ENST00000516278 METTL3Q86U44 580 aaKnown RBP10.34□□□□□ -0.75
RN7SKP248-201ENST00000516278 PXYLP1Q8TE99 480 aa10.34□□□□□ -0.75
RN7SKP248-201ENST00000516278 MMRN1Q13201 1228 aa10.33□□□□□ -0.76
RN7SKP248-201ENST00000516278 WNT2BQ93097 391 aa10.33□□□□□ -0.76
RN7SKP248-201ENST00000516278 ANKK1Q8NFD2 765 aa10.32□□□□□ -0.76
RN7SKP248-201ENST00000516278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.31□□□□□ -0.76
RN7SKP248-201ENST00000516278 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
RN7SKP248-201ENST00000516278 DNAJB2P25686 324 aa10.31□□□□□ -0.76
RN7SKP248-201ENST00000516278 CCDC102AQ96A19 550 aa10.3□□□□□ -0.76
RN7SKP248-201ENST00000516278 RNF166Q96A37 237 aaPredicted RBP10.3□□□□□ -0.76
RN7SKP248-201ENST00000516278 KCTD12Q96CX2 325 aaKnown RBP10.3□□□□□ -0.76
RN7SKP248-201ENST00000516278 AK7Q96M32 723 aa10.29□□□□□ -0.76
RN7SKP248-201ENST00000516278 SAMD7Q7Z3H4 446 aa10.28□□□□□ -0.76
RN7SKP248-201ENST00000516278 LRCH3Q96II8 777 aa10.28□□□□□ -0.76
RN7SKP248-201ENST00000516278 TMEM134Q9H6X4 195 aa10.28□□□□□ -0.76
RN7SKP248-201ENST00000516278 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.28□□□□□ -0.76
RN7SKP248-201ENST00000516278 SOWAHBA6NEL2 793 aa10.27□□□□□ -0.77
RN7SKP248-201ENST00000516278 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
RN7SKP248-201ENST00000516278 TPRNQ4KMQ1 711 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms