RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 SOWAHBA6NEL2 793 aa5.46□□□□□ -1.54
RNU6-561P-201ENST00000516222 ITGBL1O95965 494 aaPredicted RBP5.46□□□□□ -1.54
RNU6-561P-201ENST00000516222 DCAF8L2P0C7V8 631 aa5.46□□□□□ -1.54
RNU6-561P-201ENST00000516222 EPAS1Q99814 870 aa5.46□□□□□ -1.54
RNU6-561P-201ENST00000516222 PCDHGA10Q9Y5H3 936 aa5.46□□□□□ -1.54
RNU6-561P-201ENST00000516222 MFSD10Q14728 455 aa5.45□□□□□ -1.54
RNU6-561P-201ENST00000516222 LAPTM4AQ15012 233 aa5.45□□□□□ -1.54
RNU6-561P-201ENST00000516222 Q6ZNB5 142 aa5.45□□□□□ -1.54
RNU6-561P-201ENST00000516222 ZFRQ96KR1 1074 aaKnown RBP5.45□□□□□ -1.54
RNU6-561P-201ENST00000516222 KIAA1468Q9P260 1216 aa5.45□□□□□ -1.54
RNU6-561P-201ENST00000516222 GTPBP6O43824 516 aaPredicted RBP5.44□□□□□ -1.54
RNU6-561P-201ENST00000516222 PROX2Q3B8N5 592 aa5.44□□□□□ -1.54
RNU6-561P-201ENST00000516222 BCAMP50895 628 aa5.43□□□□□ -1.54
RNU6-561P-201ENST00000516222 C6orf132Q5T0Z8 1188 aa5.43□□□□□ -1.54
RNU6-561P-201ENST00000516222 PACS2Q86VP3 889 aa5.43□□□□□ -1.54
RNU6-561P-201ENST00000516222 LRCH3Q96II8 777 aa5.43□□□□□ -1.54
RNU6-561P-201ENST00000516222 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.43□□□□□ -1.54
RNU6-561P-201ENST00000516222 COL9A1P20849 921 aa5.42□□□□□ -1.54
RNU6-561P-201ENST00000516222 FAM98CQ17RN3 349 aaKnown RBP5.42□□□□□ -1.54
RNU6-561P-201ENST00000516222 TSR3Q9UJK0 312 aaKnown RBP5.42□□□□□ -1.54
RNU6-561P-201ENST00000516222 HDGFP51858 240 aaKnown RBP5.41□□□□□ -1.54
RNU6-561P-201ENST00000516222 EMILIN3Q9NT22 766 aa5.41□□□□□ -1.54
RNU6-561P-201ENST00000516222 WBP1LQ9NX94 342 aa5.41□□□□□ -1.54
RNU6-561P-201ENST00000516222 TRIM6-TRIM34B2RNG4 842 aa5.4□□□□□ -1.54
RNU6-561P-201ENST00000516222 PPP4CP60510 307 aa5.4□□□□□ -1.54
RNU6-561P-201ENST00000516222 RBM33Q96EV2 1170 aaKnown RBP5.39□□□□□ -1.55
RNU6-561P-201ENST00000516222 SEPT9Q9UHD8 586 aaPredicted RBP5.39□□□□□ -1.55
RNU6-561P-201ENST00000516222 HPS5Q9UPZ3 1129 aa5.39□□□□□ -1.55
RNU6-561P-201ENST00000516222 DPYSL4O14531 572 aa5.37□□□□□ -1.55
RNU6-561P-201ENST00000516222 MAP3K7O43318 606 aa5.37□□□□□ -1.55
RNU6-561P-201ENST00000516222 GFRA3O60609 400 aa5.37□□□□□ -1.55
RNU6-561P-201ENST00000516222 CAMK2BQ13554 666 aa5.36□□□□□ -1.55
RNU6-561P-201ENST00000516222 CERKQ8TCT0 537 aa5.36□□□□□ -1.55
RNU6-561P-201ENST00000516222 NECTIN2Q92692 538 aa5.36□□□□□ -1.55
RNU6-561P-201ENST00000516222 DDX12PQ92771 950 aa5.36□□□□□ -1.55
RNU6-561P-201ENST00000516222 SLC4A3P48751 1232 aa5.35□□□□□ -1.55
RNU6-561P-201ENST00000516222 TRAF7Q6Q0C0 670 aa5.35□□□□□ -1.55
RNU6-561P-201ENST00000516222 SPDYE16A6NNV3 312 aaPredicted RBP5.34□□□□□ -1.55
RNU6-561P-201ENST00000516222 NBR1Q14596 966 aa5.34□□□□□ -1.55
RNU6-561P-201ENST00000516222 GGCXP38435 758 aa5.33□□□□□ -1.56
RNU6-561P-201ENST00000516222 IL21Q9HBE4 155 aa5.33□□□□□ -1.56
RNU6-561P-201ENST00000516222 NBPF26B4DH59 902 aa5.32□□□□□ -1.56
RNU6-561P-201ENST00000516222 EN1Q05925 392 aaPredicted RBP5.32□□□□□ -1.56
RNU6-561P-201ENST00000516222 PRKD2Q9BZL6 878 aa5.32□□□□□ -1.56
RNU6-561P-201ENST00000516222 NRG2O14511 850 aaPredicted RBP5.31□□□□□ -1.56
RNU6-561P-201ENST00000516222 PRSS12P56730 875 aa5.31□□□□□ -1.56
RNU6-561P-201ENST00000516222 SAMD7Q7Z3H4 446 aa5.31□□□□□ -1.56
RNU6-561P-201ENST00000516222 CADPS2Q86UW7 1296 aa5.31□□□□□ -1.56
RNU6-561P-201ENST00000516222 CDCA7LQ96GN5 454 aa5.31□□□□□ -1.56
RNU6-561P-201ENST00000516222 WDR70Q9NW82 654 aa5.31□□□□□ -1.56
RNU6-561P-201ENST00000516222 V9GY48 417 aaPredicted RBP5.31□□□□□ -1.56
RNU6-561P-201ENST00000516222 RNF40O75150 1001 aa5.3□□□□□ -1.56
RNU6-561P-201ENST00000516222 TSKSQ9UJT2 592 aa5.3□□□□□ -1.56
RNU6-561P-201ENST00000516222 PDIA6Q15084 440 aa5.29□□□□□ -1.56
RNU6-561P-201ENST00000516222 TJAP1Q5JTD0 557 aa5.29□□□□□ -1.56
RNU6-561P-201ENST00000516222 PPP1R18Q6NYC8 613 aa5.29□□□□□ -1.56
RNU6-561P-201ENST00000516222 TATDN2Q93075 761 aa5.29□□□□□ -1.56
RNU6-561P-201ENST00000516222 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.29□□□□□ -1.56
RNU6-561P-201ENST00000516222 PNMA3Q9UL41 463 aa5.29□□□□□ -1.56
RNU6-561P-201ENST00000516222 TSR1Q2NL82 804 aaKnown RBP5.28□□□□□ -1.56
RNU6-561P-201ENST00000516222 BBXQ8WY36 941 aaPredicted RBP5.28□□□□□ -1.56
RNU6-561P-201ENST00000516222 MTRQ99707 1265 aa5.28□□□□□ -1.56
RNU6-561P-201ENST00000516222 GRXCR2A6NFK2 248 aa5.27□□□□□ -1.57
RNU6-561P-201ENST00000516222 SMAPO00193 183 aa5.27□□□□□ -1.57
RNU6-561P-201ENST00000516222 E2F4Q16254 413 aa5.27□□□□□ -1.57
RNU6-561P-201ENST00000516222 SLF2Q8IX21 1173 aa5.27□□□□□ -1.57
RNU6-561P-201ENST00000516222 PRR14Q9BWN1 585 aa5.27□□□□□ -1.57
RNU6-561P-201ENST00000516222 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.27□□□□□ -1.57
RNU6-561P-201ENST00000516222 PDZRN3Q9UPQ7 1066 aa5.27□□□□□ -1.57
RNU6-561P-201ENST00000516222 ZNF787Q6DD87 383 aa5.26□□□□□ -1.57
RNU6-561P-201ENST00000516222 SPRYD3Q8NCJ5 442 aa5.26□□□□□ -1.57
RNU6-561P-201ENST00000516222 TMUB1Q9BVT8 246 aa5.26□□□□□ -1.57
RNU6-561P-201ENST00000516222 NUDT18Q6ZVK8 323 aa5.25□□□□□ -1.57
RNU6-561P-201ENST00000516222 RBM27Q9P2N5 1060 aaKnown RBP5.25□□□□□ -1.57
RNU6-561P-201ENST00000516222 ZNF516Q92618 1163 aa5.22□□□□□ -1.57
RNU6-561P-201ENST00000516222 ARIH1Q9Y4X5 557 aaPredicted RBP5.22□□□□□ -1.57
RNU6-561P-201ENST00000516222 APLP1P51693 650 aa5.21□□□□□ -1.58
RNU6-561P-201ENST00000516222 COPS2P61201 443 aa5.21□□□□□ -1.58
RNU6-561P-201ENST00000516222 PKDCCQ504Y2 493 aa5.2□□□□□ -1.58
RNU6-561P-201ENST00000516222 SWT1Q5T5J6 900 aaKnown RBP5.2□□□□□ -1.58
RNU6-561P-201ENST00000516222 FAM198AQ9UFP1 575 aa5.2□□□□□ -1.58
RNU6-561P-201ENST00000516222 PCDHB3Q9Y5E6 796 aa5.2□□□□□ -1.58
RNU6-561P-201ENST00000516222 ZPR1O75312 459 aa5.19□□□□□ -1.58
RNU6-561P-201ENST00000516222 OSBPP22059 807 aa5.19□□□□□ -1.58
RNU6-561P-201ENST00000516222 SLC19A1P41440 591 aa5.19□□□□□ -1.58
RNU6-561P-201ENST00000516222 NKX2-3Q8TAU0 364 aa5.18□□□□□ -1.58
RNU6-561P-201ENST00000516222 DGAT1O75907 488 aa5.17□□□□□ -1.58
RNU6-561P-201ENST00000516222 KMT5BQ4FZB7 885 aa5.17□□□□□ -1.58
RNU6-561P-201ENST00000516222 PADI6Q6TGC4 694 aa5.17□□□□□ -1.58
RNU6-561P-201ENST00000516222 LCE2BO14633 110 aa5.16□□□□□ -1.58
RNU6-561P-201ENST00000516222 RSPH4AQ5TD94 716 aa5.16□□□□□ -1.58
RNU6-561P-201ENST00000516222 RBM46Q8TBY0 533 aaKnown RBP5.16□□□□□ -1.58
RNU6-561P-201ENST00000516222 C3orf80F5H4A9 247 aa5.15□□□□□ -1.59
RNU6-561P-201ENST00000516222 ZNF598Q86UK7 904 aaKnown RBP5.15□□□□□ -1.59
RNU6-561P-201ENST00000516222 TTC13Q8NBP0 860 aa5.15□□□□□ -1.59
RNU6-561P-201ENST00000516222 ZNF775Q96BV0 537 aaPredicted RBP5.15□□□□□ -1.59
RNU6-561P-201ENST00000516222 CFAP44Q96MT7 982 aa5.15□□□□□ -1.59
RNU6-561P-201ENST00000516222 CDHR5Q9HBB8 845 aa5.15□□□□□ -1.59
RNU6-561P-201ENST00000516222 RNF223E7ERA6 249 aa5.14□□□□□ -1.59
RNU6-561P-201ENST00000516222 DNAJB2P25686 324 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms