RNA–Protein interactions for RNA: ENST00000515863.1

ATR-210, Transcript of ATR serine/threonine kinase, humanhuman

TSL 2

Gene ATR, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-210ENST00000515863 SLC4A5Q9BY07 1137 aa11.59□□□□□ -0.55
ATR-210ENST00000515863 ZCCHC6Q5VYS8 1495 aaKnown RBP11.58□□□□□ -0.56
ATR-210ENST00000515863 TYW1BQ6NUM6 668 aa11.58□□□□□ -0.56
ATR-210ENST00000515863 ZBED2Q9BTP6 218 aa11.58□□□□□ -0.56
ATR-210ENST00000515863 WDR70Q9NW82 654 aa11.57□□□□□ -0.56
ATR-210ENST00000515863 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
ATR-210ENST00000515863 CC2D2AQ9P2K1 1620 aa11.56□□□□□ -0.56
ATR-210ENST00000515863 E2F4Q16254 413 aa11.55□□□□□ -0.56
ATR-210ENST00000515863 DDX12PQ92771 950 aa11.54□□□□□ -0.56
ATR-210ENST00000515863 KCTD12Q96CX2 325 aaKnown RBP11.54□□□□□ -0.56
ATR-210ENST00000515863 HCSTQ9UBK5 93 aa11.54□□□□□ -0.56
ATR-210ENST00000515863 PPP1R3GB7ZBB8 358 aa11.53□□□□□ -0.56
ATR-210ENST00000515863 EPAS1Q99814 870 aa11.53□□□□□ -0.56
ATR-210ENST00000515863 PDIA6Q15084 440 aa11.52□□□□□ -0.57
ATR-210ENST00000515863 CECR2Q9BXF3 1484 aa11.51□□□□□ -0.57
ATR-210ENST00000515863 EIF4G1Q04637 1599 aaKnown RBP11.51□□□□□ -0.57
ATR-210ENST00000515863 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
ATR-210ENST00000515863 COL9A1P20849 921 aa11.51□□□□□ -0.57
ATR-210ENST00000515863 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
ATR-210ENST00000515863 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
ATR-210ENST00000515863 PROX2Q3B8N5 592 aa11.48□□□□□ -0.57
ATR-210ENST00000515863 C6orf132Q5T0Z8 1188 aa11.48□□□□□ -0.57
ATR-210ENST00000515863 MRPL50Q8N5N7 158 aaKnown RBP11.48□□□□□ -0.57
ATR-210ENST00000515863 NBR1Q14596 966 aa11.47□□□□□ -0.57
ATR-210ENST00000515863 NBPF3Q9H094 633 aa11.47□□□□□ -0.57
ATR-210ENST00000515863 GOLGA8CPA6NN73 597 aa11.46□□□□□ -0.57
ATR-210ENST00000515863 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
ATR-210ENST00000515863 ARIH1Q9Y4X5 557 aaPredicted RBP11.46□□□□□ -0.57
ATR-210ENST00000515863 RABGEF1Q9UJ41 708 aa11.44□□□□□ -0.58
ATR-210ENST00000515863 MAP3K7O43318 606 aa11.42□□□□□ -0.58
ATR-210ENST00000515863 PTPN5P54829 565 aa11.42□□□□□ -0.58
ATR-210ENST00000515863 EN1Q05925 392 aaPredicted RBP11.42□□□□□ -0.58
ATR-210ENST00000515863 WNT2BQ93097 391 aa11.42□□□□□ -0.58
ATR-210ENST00000515863 THSD4Q6ZMP0 1018 aa11.41□□□□□ -0.58
ATR-210ENST00000515863 GRXCR2A6NFK2 248 aa11.4□□□□□ -0.58
ATR-210ENST00000515863 TSR1Q2NL82 804 aaKnown RBP11.4□□□□□ -0.58
ATR-210ENST00000515863 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
ATR-210ENST00000515863 KIAA1468Q9P260 1216 aa11.4□□□□□ -0.58
ATR-210ENST00000515863 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
ATR-210ENST00000515863 TRIM6-TRIM34B2RNG4 842 aa11.37□□□□□ -0.59
ATR-210ENST00000515863 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
ATR-210ENST00000515863 PRIM1P49642 420 aaKnown RBP11.35□□□□□ -0.59
ATR-210ENST00000515863 LAPTM4BQ86VI4 370 aa11.34□□□□□ -0.59
ATR-210ENST00000515863 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
ATR-210ENST00000515863 ANKK1Q8NFD2 765 aa11.33□□□□□ -0.6
ATR-210ENST00000515863 OSBPP22059 807 aa11.31□□□□□ -0.6
ATR-210ENST00000515863 ZFRQ96KR1 1074 aaKnown RBP11.31□□□□□ -0.6
ATR-210ENST00000515863 TSKSQ9UJT2 592 aa11.31□□□□□ -0.6
ATR-210ENST00000515863 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
ATR-210ENST00000515863 BCAMP50895 628 aa11.29□□□□□ -0.6
ATR-210ENST00000515863 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
ATR-210ENST00000515863 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
ATR-210ENST00000515863 PACS2Q86VP3 889 aa11.28□□□□□ -0.6
ATR-210ENST00000515863 CERKQ8TCT0 537 aa11.28□□□□□ -0.6
ATR-210ENST00000515863 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
ATR-210ENST00000515863 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
ATR-210ENST00000515863 SOWAHBA6NEL2 793 aa11.27□□□□□ -0.61
ATR-210ENST00000515863 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
ATR-210ENST00000515863 PRSS12P56730 875 aa11.26□□□□□ -0.61
ATR-210ENST00000515863 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
ATR-210ENST00000515863 MLLT3P42568 568 aaPredicted RBP11.23□□□□□ -0.61
ATR-210ENST00000515863 SMAPO00193 183 aa11.22□□□□□ -0.61
ATR-210ENST00000515863 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
ATR-210ENST00000515863 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.21□□□□□ -0.61
ATR-210ENST00000515863 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
ATR-210ENST00000515863 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
ATR-210ENST00000515863 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
ATR-210ENST00000515863 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
ATR-210ENST00000515863 PNMA3Q9UL41 463 aa11.19□□□□□ -0.62
ATR-210ENST00000515863 TATDN2Q93075 761 aa11.18□□□□□ -0.62
ATR-210ENST00000515863 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
ATR-210ENST00000515863 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
ATR-210ENST00000515863 TSR3Q9UJK0 312 aaKnown RBP11.17□□□□□ -0.62
ATR-210ENST00000515863 HPS5Q9UPZ3 1129 aa11.17□□□□□ -0.62
ATR-210ENST00000515863 CUX2O14529 1486 aa11.17□□□□□ -0.62
ATR-210ENST00000515863 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
ATR-210ENST00000515863 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
ATR-210ENST00000515863 NUDT18Q6ZVK8 323 aa11.16□□□□□ -0.62
ATR-210ENST00000515863 PADI6Q6TGC4 694 aa11.15□□□□□ -0.62
ATR-210ENST00000515863 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.62
ATR-210ENST00000515863 TTC13Q8NBP0 860 aa11.13□□□□□ -0.63
ATR-210ENST00000515863 NCAPD3P42695 1498 aa11.12□□□□□ -0.63
ATR-210ENST00000515863 SEMA3EO15041 775 aa11.11□□□□□ -0.63
ATR-210ENST00000515863 ITGBL1O95965 494 aaPredicted RBP11.11□□□□□ -0.63
ATR-210ENST00000515863 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
ATR-210ENST00000515863 PPP4CP60510 307 aa11.11□□□□□ -0.63
ATR-210ENST00000515863 A0A0G2JS52 829 aa11.1□□□□□ -0.63
ATR-210ENST00000515863 PTGDRQ13258 359 aa11.08□□□□□ -0.64
ATR-210ENST00000515863 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
ATR-210ENST00000515863 RNF40O75150 1001 aa11.07□□□□□ -0.64
ATR-210ENST00000515863 HDGFP51858 240 aaKnown RBP11.07□□□□□ -0.64
ATR-210ENST00000515863 KCNC4Q03721 635 aa11.05□□□□□ -0.64
ATR-210ENST00000515863 EYA1Q99502 592 aa11.04□□□□□ -0.64
ATR-210ENST00000515863 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
ATR-210ENST00000515863 SWT1Q5T5J6 900 aaKnown RBP11.03□□□□□ -0.64
ATR-210ENST00000515863 RGS20O76081 388 aa11.01□□□□□ -0.65
ATR-210ENST00000515863 ATAD2BQ9ULI0 1458 aa11□□□□□ -0.65
ATR-210ENST00000515863 TESPA1A2RU30 521 aaPredicted RBP11□□□□□ -0.65
ATR-210ENST00000515863 FCHSD2O94868 740 aa11□□□□□ -0.65
ATR-210ENST00000515863 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms