RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 EPRSP07814 1512 aaKnown RBP13.12□□□□□ -0.31
SMG7-215ENST00000515829 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
SMG7-215ENST00000515829 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
SMG7-215ENST00000515829 USP35Q9P2H5 1018 aa13.12□□□□□ -0.31
SMG7-215ENST00000515829 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
SMG7-215ENST00000515829 KIAA1107Q9UPP5 1409 aa13.11□□□□□ -0.31
SMG7-215ENST00000515829 GZF1Q9H116 711 aaPredicted RBP13.11□□□□□ -0.31
SMG7-215ENST00000515829 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
SMG7-215ENST00000515829 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
SMG7-215ENST00000515829 GSE1Q14687 1217 aa13.1□□□□□ -0.31
SMG7-215ENST00000515829 COG6Q9Y2V7 657 aa13.09□□□□□ -0.31
SMG7-215ENST00000515829 U2AF1L5P0DN76 240 aaPredicted RBP13.09□□□□□ -0.31
SMG7-215ENST00000515829 U2AF1Q01081 240 aaKnown RBP eCLIP13.09□□□□□ -0.312e-8■■□□□ 12.3
SMG7-215ENST00000515829 IL27Q8NEV9 243 aa13.09□□□□□ -0.31
SMG7-215ENST00000515829 CENPJQ9HC77 1338 aaPredicted RBP13.09□□□□□ -0.31
SMG7-215ENST00000515829 EFCAB2Q5VUJ9 269 aa13.08□□□□□ -0.32
SMG7-215ENST00000515829 BACH2Q9BYV9 841 aa13.08□□□□□ -0.32
SMG7-215ENST00000515829 KIF3BO15066 747 aa13.08□□□□□ -0.32
SMG7-215ENST00000515829 RSPH4AQ5TD94 716 aa13.08□□□□□ -0.32
SMG7-215ENST00000515829 ABCC5O15440 1437 aa13.08□□□□□ -0.32
SMG7-215ENST00000515829 MYH16Q9H6N6 1097 aa13.07□□□□□ -0.32
SMG7-215ENST00000515829 GGT6Q6P531 493 aa13.06□□□□□ -0.32
SMG7-215ENST00000515829 TRIM44Q96DX7 344 aaPredicted RBP13.06□□□□□ -0.32
SMG7-215ENST00000515829 NFKBIBQ15653 356 aa13.06□□□□□ -0.32
SMG7-215ENST00000515829 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
SMG7-215ENST00000515829 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
SMG7-215ENST00000515829 KANK1Q14678 1352 aa13.06□□□□□ -0.32
SMG7-215ENST00000515829 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
SMG7-215ENST00000515829 NAP1L5Q96NT1 182 aaPredicted RBP13.06□□□□□ -0.32
SMG7-215ENST00000515829 RPRD2Q5VT52 1461 aaKnown RBP13.05□□□□□ -0.32
SMG7-215ENST00000515829 STK26Q9P289 416 aa13.05□□□□□ -0.32
SMG7-215ENST00000515829 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
SMG7-215ENST00000515829 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
SMG7-215ENST00000515829 ROCK1Q13464 1354 aa13.04□□□□□ -0.32
SMG7-215ENST00000515829 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
SMG7-215ENST00000515829 ITPRIPQ8IWB1 547 aa13.04□□□□□ -0.32
SMG7-215ENST00000515829 RWDD1Q9H446 243 aaPredicted RBP13.04□□□□□ -0.32
SMG7-215ENST00000515829 GRIN2BQ13224 1484 aa13.04□□□□□ -0.32
SMG7-215ENST00000515829 PTPRGP23470 1445 aa13.03□□□□□ -0.32
SMG7-215ENST00000515829 SPAG9O60271 1321 aaKnown RBP13.03□□□□□ -0.32
SMG7-215ENST00000515829 POGKQ9P215 609 aa13.03□□□□□ -0.32
SMG7-215ENST00000515829 HSP90AB1P08238 724 aaKnown RBP13.03□□□□□ -0.32
SMG7-215ENST00000515829 C20orf194Q5TEA3 1177 aa13.02□□□□□ -0.32
SMG7-215ENST00000515829 HSCBQ8IWL3 235 aa13.02□□□□□ -0.32
SMG7-215ENST00000515829 E9PSI1 815 aa13.02□□□□□ -0.32
SMG7-215ENST00000515829 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.32
SMG7-215ENST00000515829 CUL7Q14999 1698 aa13.02□□□□□ -0.33
SMG7-215ENST00000515829 TROQ12816 1431 aaPredicted RBP13.02□□□□□ -0.33
SMG7-215ENST00000515829 PPP2R1AP30153 589 aa13.02□□□□□ -0.33
SMG7-215ENST00000515829 PANK1Q8TE04 598 aa13.02□□□□□ -0.33
SMG7-215ENST00000515829 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
SMG7-215ENST00000515829 C9orf84Q5VXU9 1444 aa13.01□□□□□ -0.33
SMG7-215ENST00000515829 PMFBP1Q8TBY8 1022 aa13.01□□□□□ -0.33
SMG7-215ENST00000515829 EIF3AQ14152 1382 aaKnown RBP13□□□□□ -0.33
SMG7-215ENST00000515829 SMC4Q9NTJ3 1288 aa13□□□□□ -0.33
SMG7-215ENST00000515829 BCAR3O75815 825 aa13□□□□□ -0.33
SMG7-215ENST00000515829 L1TD1Q5T7N2 865 aaKnown RBP12.99□□□□□ -0.33
SMG7-215ENST00000515829 URB2Q14146 1524 aaKnown RBP12.99□□□□□ -0.33
SMG7-215ENST00000515829 CFAP43Q8NDM7 1665 aa12.99□□□□□ -0.33
SMG7-215ENST00000515829 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
SMG7-215ENST00000515829 GOLGA6L22H0YM25 854 aa12.99□□□□□ -0.33
SMG7-215ENST00000515829 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
SMG7-215ENST00000515829 ANO8Q9HCE9 1232 aaPredicted RBP12.99□□□□□ -0.33
SMG7-215ENST00000515829 FRAT2O75474 233 aaPredicted RBP12.98□□□□□ -0.33
SMG7-215ENST00000515829 TPRNQ4KMQ1 711 aa12.98□□□□□ -0.33
SMG7-215ENST00000515829 UGGT2Q9NYU1 1516 aa12.98□□□□□ -0.33
SMG7-215ENST00000515829 CGNL1Q0VF96 1302 aa12.97□□□□□ -0.33
SMG7-215ENST00000515829 IQGAP2Q13576 1575 aa12.97□□□□□ -0.33
SMG7-215ENST00000515829 THOC2Q8NI27 1593 aaKnown RBP12.97□□□□□ -0.33
SMG7-215ENST00000515829 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
SMG7-215ENST00000515829 CAMSAP2Q08AD1 1489 aa12.96□□□□□ -0.34
SMG7-215ENST00000515829 APBB1O00213 710 aa12.95□□□□□ -0.34
SMG7-215ENST00000515829 PLB1Q6P1J6 1458 aa12.95□□□□□ -0.34
SMG7-215ENST00000515829 GOLGA6L3A6NEY3 463 aa12.94□□□□□ -0.34
SMG7-215ENST00000515829 CFAP70Q5T0N1 1121 aa12.94□□□□□ -0.34
SMG7-215ENST00000515829 WASHC2CQ9Y4E1 1318 aa12.93□□□□□ -0.34
SMG7-215ENST00000515829 AFAP1Q8N556 730 aa12.92□□□□□ -0.34
SMG7-215ENST00000515829 ERBINQ96RT1 1412 aa12.92□□□□□ -0.34
SMG7-215ENST00000515829 IPO8O15397 1037 aaKnown RBP12.92□□□□□ -0.34
SMG7-215ENST00000515829 DHX29Q7Z478 1369 aaKnown RBP12.91□□□□□ -0.34
SMG7-215ENST00000515829 ELL2O00472 640 aaPredicted RBP12.91□□□□□ -0.34
SMG7-215ENST00000515829 SOX12O15370 315 aa12.91□□□□□ -0.34
SMG7-215ENST00000515829 ARHGEF11O15085 1522 aa12.91□□□□□ -0.34
SMG7-215ENST00000515829 KIAA0586Q9BVV6 1533 aa12.91□□□□□ -0.34
SMG7-215ENST00000515829 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
SMG7-215ENST00000515829 ZKSCAN2Q63HK3 967 aa12.9□□□□□ -0.34
SMG7-215ENST00000515829 CHMP4BQ9H444 224 aaKnown RBP12.9□□□□□ -0.34
SMG7-215ENST00000515829 TMEM132EQ6IEE7 984 aa12.89□□□□□ -0.35
SMG7-215ENST00000515829 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
SMG7-215ENST00000515829 TCP11L2Q8N4U5 519 aa12.89□□□□□ -0.35
SMG7-215ENST00000515829 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
SMG7-215ENST00000515829 CASC1Q6TDU7 716 aa12.87□□□□□ -0.35
SMG7-215ENST00000515829 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
SMG7-215ENST00000515829 MRC2Q9UBG0 1479 aa12.87□□□□□ -0.35
SMG7-215ENST00000515829 CTTNBP2Q8WZ74 1663 aa12.87□□□□□ -0.35
SMG7-215ENST00000515829 ARHGAP5Q13017 1502 aa12.87□□□□□ -0.35
SMG7-215ENST00000515829 DISP3Q9P2K9 1392 aa12.87□□□□□ -0.35
SMG7-215ENST00000515829 SLFN5Q08AF3 891 aa12.87□□□□□ -0.35
SMG7-215ENST00000515829 MTHFSP49914 203 aa12.87□□□□□ -0.35
SMG7-215ENST00000515829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms