RNA–Protein interactions for RNA: ENST00000515818.5

RPS3A-214, Transcript of ribosomal protein S3A, humanhuman

TSL 5

Gene RPS3A, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-214ENST00000515818 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
RPS3A-214ENST00000515818 MMRN1Q13201 1228 aa12.83□□□□□ -0.36
RPS3A-214ENST00000515818 ADGRD1Q6QNK2 874 aa12.82□□□□□ -0.36
RPS3A-214ENST00000515818 RBM33Q96EV2 1170 aaKnown RBP12.82□□□□□ -0.36
RPS3A-214ENST00000515818 TK2O00142 265 aa12.81□□□□□ -0.36
RPS3A-214ENST00000515818 COL9A1P20849 921 aa12.81□□□□□ -0.36
RPS3A-214ENST00000515818 OSBPP22059 807 aa12.81□□□□□ -0.36
RPS3A-214ENST00000515818 MLLT3P42568 568 aaPredicted RBP12.81□□□□□ -0.36
RPS3A-214ENST00000515818 EN1Q05925 392 aaPredicted RBP12.81□□□□□ -0.36
RPS3A-214ENST00000515818 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
RPS3A-214ENST00000515818 C6orf132Q5T0Z8 1188 aa12.8□□□□□ -0.36
RPS3A-214ENST00000515818 ZBED2Q9BTP6 218 aa12.79□□□□□ -0.36
RPS3A-214ENST00000515818 VPS9D1Q9Y2B5 631 aa12.78□□□□□ -0.36
RPS3A-214ENST00000515818 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
RPS3A-214ENST00000515818 SEMA3EO15041 775 aa12.77□□□□□ -0.37
RPS3A-214ENST00000515818 HRO43593 1189 aa12.77□□□□□ -0.37
RPS3A-214ENST00000515818 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
RPS3A-214ENST00000515818 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
RPS3A-214ENST00000515818 MAP3K7O43318 606 aa12.76□□□□□ -0.37
RPS3A-214ENST00000515818 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
RPS3A-214ENST00000515818 PROX2Q3B8N5 592 aa12.72□□□□□ -0.37
RPS3A-214ENST00000515818 CDHR5Q9HBB8 845 aa12.7□□□□□ -0.38
RPS3A-214ENST00000515818 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
RPS3A-214ENST00000515818 BHMG1C9JSJ3 638 aaPredicted RBP12.69□□□□□ -0.38
RPS3A-214ENST00000515818 RNF166Q96A37 237 aaPredicted RBP12.68□□□□□ -0.38
RPS3A-214ENST00000515818 NPDC1Q9NQX5 325 aaPredicted RBP12.64□□□□□ -0.39
RPS3A-214ENST00000515818 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
RPS3A-214ENST00000515818 RABGEF1Q9UJ41 708 aa12.63□□□□□ -0.39
RPS3A-214ENST00000515818 ONECUT3O60422 494 aaPredicted RBP12.62□□□□□ -0.39
RPS3A-214ENST00000515818 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
RPS3A-214ENST00000515818 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
RPS3A-214ENST00000515818 FAM198AQ9UFP1 575 aa12.61□□□□□ -0.39
RPS3A-214ENST00000515818 PRSS12P56730 875 aa12.6□□□□□ -0.39
RPS3A-214ENST00000515818 CERKQ8TCT0 537 aa12.6□□□□□ -0.39
RPS3A-214ENST00000515818 CDCA7LQ96GN5 454 aa12.6□□□□□ -0.39
RPS3A-214ENST00000515818 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
RPS3A-214ENST00000515818 RBM26Q5T8P6 1007 aaKnown RBP12.57□□□□□ -0.4
RPS3A-214ENST00000515818 MRPL50Q8N5N7 158 aaKnown RBP12.57□□□□□ -0.4
RPS3A-214ENST00000515818 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
RPS3A-214ENST00000515818 C3orf80F5H4A9 247 aa12.56□□□□□ -0.4
RPS3A-214ENST00000515818 PTGDRQ13258 359 aa12.55□□□□□ -0.4
RPS3A-214ENST00000515818 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
RPS3A-214ENST00000515818 SMYD5Q6GMV2 418 aa12.54□□□□□ -0.4
RPS3A-214ENST00000515818 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
RPS3A-214ENST00000515818 RBM27Q9P2N5 1060 aaKnown RBP12.54□□□□□ -0.4
RPS3A-214ENST00000515818 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
RPS3A-214ENST00000515818 KCTD12Q96CX2 325 aaKnown RBP12.53□□□□□ -0.4
RPS3A-214ENST00000515818 PADI6Q6TGC4 694 aa12.52□□□□□ -0.41
RPS3A-214ENST00000515818 PACS2Q86VP3 889 aa12.52□□□□□ -0.41
RPS3A-214ENST00000515818 LAPTM4BQ86VI4 370 aa12.51□□□□□ -0.41
RPS3A-214ENST00000515818 SMAPO00193 183 aa12.49□□□□□ -0.41
RPS3A-214ENST00000515818 GOLGA8CPA6NN73 597 aa12.48□□□□□ -0.41
RPS3A-214ENST00000515818 GPR37O15354 613 aa12.48□□□□□ -0.41
RPS3A-214ENST00000515818 WNT2BQ93097 391 aa12.48□□□□□ -0.41
RPS3A-214ENST00000515818 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
RPS3A-214ENST00000515818 FCHSD2O94868 740 aa12.47□□□□□ -0.41
RPS3A-214ENST00000515818 FAM98CQ17RN3 349 aaKnown RBP12.47□□□□□ -0.41
RPS3A-214ENST00000515818 TATDN2Q93075 761 aa12.47□□□□□ -0.41
RPS3A-214ENST00000515818 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
RPS3A-214ENST00000515818 THSD4Q6ZMP0 1018 aa12.46□□□□□ -0.41
RPS3A-214ENST00000515818 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
RPS3A-214ENST00000515818 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
RPS3A-214ENST00000515818 NUDT18Q6ZVK8 323 aa12.45□□□□□ -0.42
RPS3A-214ENST00000515818 HCSTQ9UBK5 93 aa12.43□□□□□ -0.42
RPS3A-214ENST00000515818 ANKK1Q8NFD2 765 aa12.42□□□□□ -0.42
RPS3A-214ENST00000515818 BCAMP50895 628 aa12.41□□□□□ -0.42
RPS3A-214ENST00000515818 SOWAHBA6NEL2 793 aa12.4□□□□□ -0.42
RPS3A-214ENST00000515818 FECHP22830 423 aa12.4□□□□□ -0.42
RPS3A-214ENST00000515818 PTPN5P54829 565 aa12.4□□□□□ -0.42
RPS3A-214ENST00000515818 HIC1Q14526 733 aa12.4□□□□□ -0.42
RPS3A-214ENST00000515818 EYA1Q99502 592 aa12.4□□□□□ -0.42
RPS3A-214ENST00000515818 FAM161AQ3B820 660 aa12.39□□□□□ -0.43
RPS3A-214ENST00000515818 GPIHBP1Q8IV16 184 aa12.39□□□□□ -0.43
RPS3A-214ENST00000515818 ADGRG1Q9Y653 693 aa12.39□□□□□ -0.43
RPS3A-214ENST00000515818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
RPS3A-214ENST00000515818 GNPATO15228 680 aa12.37□□□□□ -0.43
RPS3A-214ENST00000515818 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
RPS3A-214ENST00000515818 SAMD7Q7Z3H4 446 aa12.36□□□□□ -0.43
RPS3A-214ENST00000515818 LRCH3Q96II8 777 aa12.34□□□□□ -0.43
RPS3A-214ENST00000515818 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
RPS3A-214ENST00000515818 LMOD2Q6P5Q4 547 aa12.31□□□□□ -0.44
RPS3A-214ENST00000515818 RBM46Q8TBY0 533 aaKnown RBP12.31□□□□□ -0.44
RPS3A-214ENST00000515818 WBP1LQ9NX94 342 aa12.31□□□□□ -0.44
RPS3A-214ENST00000515818 HPS5Q9UPZ3 1129 aa12.3□□□□□ -0.44
RPS3A-214ENST00000515818 SWT1Q5T5J6 900 aaKnown RBP12.29□□□□□ -0.44
RPS3A-214ENST00000515818 PXYLP1Q8TE99 480 aa12.29□□□□□ -0.44
RPS3A-214ENST00000515818 TSR3Q9UJK0 312 aaKnown RBP12.28□□□□□ -0.44
RPS3A-214ENST00000515818 RCCD1A6NED2 376 aa12.27□□□□□ -0.45
RPS3A-214ENST00000515818 DNAJB2P25686 324 aa12.27□□□□□ -0.45
RPS3A-214ENST00000515818 METTL3Q86U44 580 aaKnown RBP12.27□□□□□ -0.45
RPS3A-214ENST00000515818 OATP04181 439 aa12.26□□□□□ -0.45
RPS3A-214ENST00000515818 TMEM134Q9H6X4 195 aa12.25□□□□□ -0.45
RPS3A-214ENST00000515818 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
RPS3A-214ENST00000515818 PPP4CP60510 307 aa12.23□□□□□ -0.45
RPS3A-214ENST00000515818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
RPS3A-214ENST00000515818 NYAP1Q6ZVC0 841 aa12.22□□□□□ -0.45
RPS3A-214ENST00000515818 PHOX2BQ99453 314 aa12.22□□□□□ -0.45
RPS3A-214ENST00000515818 RNF40O75150 1001 aa12.21□□□□□ -0.45
RPS3A-214ENST00000515818 MAP2K5Q13163 448 aa12.21□□□□□ -0.45
RPS3A-214ENST00000515818 PLA2G2EQ9NZK7 142 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms