RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 MPHOSPH9Q99550 1183 aa17.32■□□□□ 0.36
LMNA-224ENST00000515711 IQGAP3Q86VI3 1631 aa17.32■□□□□ 0.36
LMNA-224ENST00000515711 EIF2AK4Q9P2K8 1649 aaKnown RBP17.32■□□□□ 0.36
LMNA-224ENST00000515711 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
LMNA-224ENST00000515711 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
LMNA-224ENST00000515711 KDM5CP41229 1560 aa17.3■□□□□ 0.36
LMNA-224ENST00000515711 SCAPERQ9BY12 1400 aa17.29■□□□□ 0.36
LMNA-224ENST00000515711 TONSLQ96HA7 1378 aa17.28■□□□□ 0.36
LMNA-224ENST00000515711 DEPDC5O75140 1603 aa17.28■□□□□ 0.36
LMNA-224ENST00000515711 FAM135AQ9P2D6 1515 aa17.27■□□□□ 0.36
LMNA-224ENST00000515711 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
LMNA-224ENST00000515711 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
LMNA-224ENST00000515711 KIDINS220Q9ULH0 1771 aa17.26■□□□□ 0.35
LMNA-224ENST00000515711 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
LMNA-224ENST00000515711 FRMPD1Q5SYB0 1578 aa17.25■□□□□ 0.35
LMNA-224ENST00000515711 SIN3AQ96ST3 1273 aa17.25■□□□□ 0.35
LMNA-224ENST00000515711 ANKRD30BQ9BXX2 1392 aa17.25■□□□□ 0.35
LMNA-224ENST00000515711 RPRD2Q5VT52 1461 aaKnown RBP17.24■□□□□ 0.35
LMNA-224ENST00000515711 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
LMNA-224ENST00000515711 NUP155O75694 1391 aa17.24■□□□□ 0.35
LMNA-224ENST00000515711 ZNF316A6NFI3 1004 aaPredicted RBP17.23■□□□□ 0.35
LMNA-224ENST00000515711 RICTORQ6R327 1708 aa17.23■□□□□ 0.35
LMNA-224ENST00000515711 MLH3Q9UHC1 1453 aa17.21■□□□□ 0.35
LMNA-224ENST00000515711 PRDM15P57071 1507 aaPredicted RBP17.18■□□□□ 0.34
LMNA-224ENST00000515711 ARHGEF40Q8TER5 1519 aa17.18■□□□□ 0.34
LMNA-224ENST00000515711 RNF17Q9BXT8 1623 aaKnown RBP17.18■□□□□ 0.34
LMNA-224ENST00000515711 TET3O43151 1660 aa17.17■□□□□ 0.34
LMNA-224ENST00000515711 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
LMNA-224ENST00000515711 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
LMNA-224ENST00000515711 VWDEQ8N2E2 1590 aa17.15■□□□□ 0.34
LMNA-224ENST00000515711 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
LMNA-224ENST00000515711 ABCA6Q8N139 1617 aa17.15■□□□□ 0.34
LMNA-224ENST00000515711 PKD2Q13563 968 aa17.15■□□□□ 0.34
LMNA-224ENST00000515711 MLECQ14165 292 aa17.15■□□□□ 0.34
LMNA-224ENST00000515711 ZMYM4Q5VZL5 1548 aa17.15■□□□□ 0.34
LMNA-224ENST00000515711 DHX29Q7Z478 1369 aaKnown RBP17.14■□□□□ 0.33
LMNA-224ENST00000515711 A2MP01023 1474 aa17.13■□□□□ 0.33
LMNA-224ENST00000515711 SIGLEC1Q9BZZ2 1709 aa17.13■□□□□ 0.33
LMNA-224ENST00000515711 MROH1Q8NDA8 1641 aa17.12■□□□□ 0.33
LMNA-224ENST00000515711 E9PCH4 1651 aa17.11■□□□□ 0.33
LMNA-224ENST00000515711 SPHKAPQ2M3C7 1700 aa17.11■□□□□ 0.33
LMNA-224ENST00000515711 STRCQ7RTU9 1775 aa17.11■□□□□ 0.33
LMNA-224ENST00000515711 FOXD1Q16676 465 aa17.11■□□□□ 0.33
LMNA-224ENST00000515711 KANK1Q14678 1352 aa17.11■□□□□ 0.33
LMNA-224ENST00000515711 ATP10AO60312 1499 aa17.11■□□□□ 0.33
LMNA-224ENST00000515711 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
LMNA-224ENST00000515711 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
LMNA-224ENST00000515711 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
LMNA-224ENST00000515711 LMTK2Q8IWU2 1503 aa17.08■□□□□ 0.32
LMNA-224ENST00000515711 ZC3H13Q5T200 1668 aaKnown RBP17.07■□□□□ 0.32
LMNA-224ENST00000515711 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
LMNA-224ENST00000515711 PREX1Q8TCU6 1659 aa17.07■□□□□ 0.32
LMNA-224ENST00000515711 FER1L4A9Z1Z3 1794 aa17.06■□□□□ 0.32
LMNA-224ENST00000515711 CEP152O94986 1710 aa17.06■□□□□ 0.32
LMNA-224ENST00000515711 LTBP4Q8N2S1 1624 aa17.06■□□□□ 0.32
LMNA-224ENST00000515711 TRPM2O94759 1503 aa17.06■□□□□ 0.32
LMNA-224ENST00000515711 CCDC144AA2RUR9 1427 aa17.05■□□□□ 0.32
LMNA-224ENST00000515711 DIEXFQ68CQ4 756 aaKnown RBP17.05■□□□□ 0.32
LMNA-224ENST00000515711 REREQ9P2R6 1566 aa17.05■□□□□ 0.32
LMNA-224ENST00000515711 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
LMNA-224ENST00000515711 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.04■□□□□ 0.32
LMNA-224ENST00000515711 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.32
LMNA-224ENST00000515711 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.31
LMNA-224ENST00000515711 PTPRTO14522 1441 aa17.01■□□□□ 0.31
LMNA-224ENST00000515711 KIF3BO15066 747 aa17■□□□□ 0.31
LMNA-224ENST00000515711 UHRF1BP1Q6BDS2 1440 aa17■□□□□ 0.31
LMNA-224ENST00000515711 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
LMNA-224ENST00000515711 IQSEC2Q5JU85 1478 aa16.99■□□□□ 0.31
LMNA-224ENST00000515711 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
LMNA-224ENST00000515711 POLR1AO95602 1720 aaPredicted RBP16.99■□□□□ 0.31
LMNA-224ENST00000515711 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
LMNA-224ENST00000515711 KIF1BO60333 1816 aa16.97■□□□□ 0.31
LMNA-224ENST00000515711 CLTCL1P53675 1640 aa16.96■□□□□ 0.31
LMNA-224ENST00000515711 ABCC3O15438 1527 aa16.96■□□□□ 0.3
LMNA-224ENST00000515711 MED1Q15648 1581 aaPredicted RBP16.95■□□□□ 0.3
LMNA-224ENST00000515711 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
LMNA-224ENST00000515711 AGLP35573 1532 aa16.95■□□□□ 0.3
LMNA-224ENST00000515711 LAMC1P11047 1609 aa16.93■□□□□ 0.3
LMNA-224ENST00000515711 TRPM1Q7Z4N2 1603 aa16.92■□□□□ 0.3
LMNA-224ENST00000515711 SPATA31E1Q6ZUB1 1445 aa16.88■□□□□ 0.29
LMNA-224ENST00000515711 CNTLNQ9NXG0 1405 aa16.88■□□□□ 0.29
LMNA-224ENST00000515711 IFT172Q9UG01 1749 aa16.88■□□□□ 0.29
LMNA-224ENST00000515711 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
LMNA-224ENST00000515711 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
LMNA-224ENST00000515711 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
LMNA-224ENST00000515711 PRAG1Q86YV5 1406 aa16.87■□□□□ 0.29
LMNA-224ENST00000515711 HSPA1LP34931 641 aa16.86■□□□□ 0.29
LMNA-224ENST00000515711 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
LMNA-224ENST00000515711 STAC3Q96MF2 364 aa16.86■□□□□ 0.29
LMNA-224ENST00000515711 NPATQ14207 1427 aa16.86■□□□□ 0.29
LMNA-224ENST00000515711 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
LMNA-224ENST00000515711 PIK3C2BO00750 1634 aa16.85■□□□□ 0.29
LMNA-224ENST00000515711 MROH2AA6NES4 1674 aa16.85■□□□□ 0.29
LMNA-224ENST00000515711 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
LMNA-224ENST00000515711 GGT6Q6P531 493 aa16.83■□□□□ 0.28
LMNA-224ENST00000515711 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
LMNA-224ENST00000515711 SCAF1Q9H7N4 1312 aaKnown RBP16.83■□□□□ 0.28
LMNA-224ENST00000515711 WASHC2CQ9Y4E1 1318 aa16.82■□□□□ 0.28
LMNA-224ENST00000515711 HSPA5P11021 654 aaKnown RBP16.82■□□□□ 0.28
LMNA-224ENST00000515711 DCAF11Q8TEB1 546 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms