RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
SMARCA5-203ENST00000515531 RBM26Q5T8P6 1007 aaKnown RBP11.5□□□□□ -0.57
SMARCA5-203ENST00000515531 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
SMARCA5-203ENST00000515531 C6orf132Q5T0Z8 1188 aa11.49□□□□□ -0.57
SMARCA5-203ENST00000515531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMARCA5-203ENST00000515531 NUTM2FA1L443 756 aa11.48□□□□□ -0.57
SMARCA5-203ENST00000515531 ARHGAP33O14559 1287 aa11.47□□□□□ -0.57
SMARCA5-203ENST00000515531 PBX2P40425 430 aa11.47□□□□□ -0.57
SMARCA5-203ENST00000515531 PRIM1P49642 420 aaKnown RBP11.47□□□□□ -0.57
SMARCA5-203ENST00000515531 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
SMARCA5-203ENST00000515531 KCNK17Q96T54 332 aa11.47□□□□□ -0.57
SMARCA5-203ENST00000515531 TSR1Q2NL82 804 aaKnown RBP11.46□□□□□ -0.57
SMARCA5-203ENST00000515531 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
SMARCA5-203ENST00000515531 GPIHBP1Q8IV16 184 aa11.44□□□□□ -0.58
SMARCA5-203ENST00000515531 PSEN2P49810 448 aa11.43□□□□□ -0.58
SMARCA5-203ENST00000515531 CERKQ8TCT0 537 aa11.42□□□□□ -0.58
SMARCA5-203ENST00000515531 PPP1R3GB7ZBB8 358 aa11.41□□□□□ -0.58
SMARCA5-203ENST00000515531 KRTAP3-3Q9BYR6 98 aa11.41□□□□□ -0.58
SMARCA5-203ENST00000515531 KRTAP3-2Q9BYR7 98 aa11.41□□□□□ -0.58
SMARCA5-203ENST00000515531 CDHR5Q9HBB8 845 aa11.41□□□□□ -0.58
SMARCA5-203ENST00000515531 POTEEQ6S8J3 1075 aa11.4□□□□□ -0.58
SMARCA5-203ENST00000515531 FCHSD2O94868 740 aa11.39□□□□□ -0.59
SMARCA5-203ENST00000515531 COL9A1P20849 921 aa11.39□□□□□ -0.59
SMARCA5-203ENST00000515531 PTGDRQ13258 359 aa11.38□□□□□ -0.59
SMARCA5-203ENST00000515531 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
SMARCA5-203ENST00000515531 NPDC1Q9NQX5 325 aaPredicted RBP11.36□□□□□ -0.59
SMARCA5-203ENST00000515531 LSM11P83369 360 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMARCA5-203ENST00000515531 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
SMARCA5-203ENST00000515531 HIC1Q14526 733 aa11.34□□□□□ -0.59
SMARCA5-203ENST00000515531 ZBED2Q9BTP6 218 aa11.34□□□□□ -0.59
SMARCA5-203ENST00000515531 PRSS12P56730 875 aa11.33□□□□□ -0.6
SMARCA5-203ENST00000515531 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
SMARCA5-203ENST00000515531 ZC3H15Q8WU90 426 aaKnown RBP11.32□□□□□ -0.6
SMARCA5-203ENST00000515531 GNPATO15228 680 aa11.31□□□□□ -0.6
SMARCA5-203ENST00000515531 PROX2Q3B8N5 592 aa11.31□□□□□ -0.6
SMARCA5-203ENST00000515531 SLC4A5Q9BY07 1137 aa11.31□□□□□ -0.6
SMARCA5-203ENST00000515531 TRIM6-TRIM34B2RNG4 842 aa11.3□□□□□ -0.6
SMARCA5-203ENST00000515531 TK2O00142 265 aa11.3□□□□□ -0.6
SMARCA5-203ENST00000515531 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
SMARCA5-203ENST00000515531 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
SMARCA5-203ENST00000515531 ADGRD1Q6QNK2 874 aa11.29□□□□□ -0.6
SMARCA5-203ENST00000515531 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
SMARCA5-203ENST00000515531 STAC3Q96MF2 364 aa11.29□□□□□ -0.6
SMARCA5-203ENST00000515531 VPS9D1Q9Y2B5 631 aa11.29□□□□□ -0.6
SMARCA5-203ENST00000515531 GPR37O15354 613 aa11.28□□□□□ -0.6
SMARCA5-203ENST00000515531 PADI6Q6TGC4 694 aa11.28□□□□□ -0.6
SMARCA5-203ENST00000515531 RNF166Q96A37 237 aaPredicted RBP11.28□□□□□ -0.6
SMARCA5-203ENST00000515531 KIAA1468Q9P260 1216 aa11.27□□□□□ -0.61
SMARCA5-203ENST00000515531 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
SMARCA5-203ENST00000515531 RABGEF1Q9UJ41 708 aa11.26□□□□□ -0.61
SMARCA5-203ENST00000515531 TSKSQ9UJT2 592 aa11.26□□□□□ -0.61
SMARCA5-203ENST00000515531 ZMYND10O75800 440 aa11.25□□□□□ -0.61
SMARCA5-203ENST00000515531 FECHP22830 423 aa11.25□□□□□ -0.61
SMARCA5-203ENST00000515531 MYT1LQ9UL68 1186 aa11.24□□□□□ -0.61
SMARCA5-203ENST00000515531 NBPF26B4DH59 902 aa11.23□□□□□ -0.61
SMARCA5-203ENST00000515531 TPRNQ4KMQ1 711 aa11.23□□□□□ -0.61
SMARCA5-203ENST00000515531 NBPF3Q9H094 633 aa11.23□□□□□ -0.61
SMARCA5-203ENST00000515531 BARGINQ6ZT62 677 aa11.22□□□□□ -0.61
SMARCA5-203ENST00000515531 TTC13Q8NBP0 860 aa11.22□□□□□ -0.61
SMARCA5-203ENST00000515531 PNMA3Q9UL41 463 aa11.22□□□□□ -0.61
SMARCA5-203ENST00000515531 MAP2K5Q13163 448 aa11.21□□□□□ -0.61
SMARCA5-203ENST00000515531 NUDT18Q6ZVK8 323 aa11.21□□□□□ -0.61
SMARCA5-203ENST00000515531 MRPL50Q8N5N7 158 aaKnown RBP11.21□□□□□ -0.61
SMARCA5-203ENST00000515531 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.61
SMARCA5-203ENST00000515531 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
SMARCA5-203ENST00000515531 TATDN2Q93075 761 aa11.2□□□□□ -0.62
SMARCA5-203ENST00000515531 BHMG1C9JSJ3 638 aaPredicted RBP11.19□□□□□ -0.62
SMARCA5-203ENST00000515531 HRO43593 1189 aa11.19□□□□□ -0.62
SMARCA5-203ENST00000515531 OATP04181 439 aa11.19□□□□□ -0.62
SMARCA5-203ENST00000515531 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
SMARCA5-203ENST00000515531 IRF6O14896 467 aa11.18□□□□□ -0.62
SMARCA5-203ENST00000515531 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
SMARCA5-203ENST00000515531 GOLGA8CPA6NN73 597 aa11.17□□□□□ -0.62
SMARCA5-203ENST00000515531 SEPT9Q9UHD8 586 aaPredicted RBP11.17□□□□□ -0.62
SMARCA5-203ENST00000515531 ADGRG1Q9Y653 693 aa11.17□□□□□ -0.62
SMARCA5-203ENST00000515531 SMAPO00193 183 aa11.16□□□□□ -0.62
SMARCA5-203ENST00000515531 LAPTM4BQ86VI4 370 aa11.16□□□□□ -0.62
SMARCA5-203ENST00000515531 HDGFP51858 240 aaKnown RBP11.14□□□□□ -0.63
SMARCA5-203ENST00000515531 FAM98CQ17RN3 349 aaKnown RBP11.14□□□□□ -0.63
SMARCA5-203ENST00000515531 C3orf80F5H4A9 247 aa11.13□□□□□ -0.63
SMARCA5-203ENST00000515531 CCDC102AQ96A19 550 aa11.13□□□□□ -0.63
SMARCA5-203ENST00000515531 EYA1Q99502 592 aa11.13□□□□□ -0.63
SMARCA5-203ENST00000515531 SLC24A3Q9HC58 644 aa11.13□□□□□ -0.63
SMARCA5-203ENST00000515531 METTL3Q86U44 580 aaKnown RBP11.12□□□□□ -0.63
SMARCA5-203ENST00000515531 PXYLP1Q8TE99 480 aa11.12□□□□□ -0.63
SMARCA5-203ENST00000515531 AK7Q96M32 723 aa11.12□□□□□ -0.63
SMARCA5-203ENST00000515531 ZFRQ96KR1 1074 aaKnown RBP11.1□□□□□ -0.63
SMARCA5-203ENST00000515531 PRKCSHP14314 528 aaPredicted RBP11.09□□□□□ -0.63
SMARCA5-203ENST00000515531 DNAJB2P25686 324 aa11.09□□□□□ -0.63
SMARCA5-203ENST00000515531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
SMARCA5-203ENST00000515531 RCCD1A6NED2 376 aa11.08□□□□□ -0.64
SMARCA5-203ENST00000515531 ANKK1Q8NFD2 765 aa11.07□□□□□ -0.64
SMARCA5-203ENST00000515531 WNT2BQ93097 391 aa11.07□□□□□ -0.64
SMARCA5-203ENST00000515531 SLC4A3P48751 1232 aa11.06□□□□□ -0.64
SMARCA5-203ENST00000515531 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
SMARCA5-203ENST00000515531 SAMD7Q7Z3H4 446 aa11.04□□□□□ -0.64
SMARCA5-203ENST00000515531 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
SMARCA5-203ENST00000515531 LRCH3Q96II8 777 aa11.04□□□□□ -0.64
SMARCA5-203ENST00000515531 TRIM66O15016 1216 aa11.03□□□□□ -0.64
SMARCA5-203ENST00000515531 TMEM134Q9H6X4 195 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms