RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 TRIM35Q9UPQ4 493 aa8.6□□□□□ -1.03
CALCOCO2-224ENST00000514962 HFM1A2PYH4 1435 aa8.6□□□□□ -1.03
CALCOCO2-224ENST00000514962 PCF11O94913 1555 aaKnown RBP8.6□□□□□ -1.03
CALCOCO2-224ENST00000514962 GOLGA2Q08379 1002 aa8.59□□□□□ -1.03
CALCOCO2-224ENST00000514962 EFCAB5A4FU69 1503 aa8.59□□□□□ -1.03
CALCOCO2-224ENST00000514962 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
CALCOCO2-224ENST00000514962 SEC24BO95487 1268 aa8.58□□□□□ -1.04
CALCOCO2-224ENST00000514962 FAM50AQ14320 339 aaKnown RBP8.58□□□□□ -1.04
CALCOCO2-224ENST00000514962 SPRYD3Q8NCJ5 442 aa8.58□□□□□ -1.04
CALCOCO2-224ENST00000514962 CCDC136Q96JN2 1154 aa8.58□□□□□ -1.04
CALCOCO2-224ENST00000514962 HECW1Q76N89 1606 aa8.58□□□□□ -1.04
CALCOCO2-224ENST00000514962 PRDM2Q13029 1718 aa8.57□□□□□ -1.04
CALCOCO2-224ENST00000514962 IER5LQ5T953 404 aa8.57□□□□□ -1.04
CALCOCO2-224ENST00000514962 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
CALCOCO2-224ENST00000514962 NCOA1Q15788 1441 aa8.56□□□□□ -1.04
CALCOCO2-224ENST00000514962 FGD6Q6ZV73 1430 aa8.56□□□□□ -1.04
CALCOCO2-224ENST00000514962 CASKIN1Q8WXD9 1431 aa8.56□□□□□ -1.04
CALCOCO2-224ENST00000514962 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
CALCOCO2-224ENST00000514962 PDAP1Q13442 181 aaKnown RBP8.56□□□□□ -1.04
CALCOCO2-224ENST00000514962 GCC2Q8IWJ2 1684 aa8.56□□□□□ -1.04
CALCOCO2-224ENST00000514962 CHGAP10645 457 aaKnown RBP8.55□□□□□ -1.04
CALCOCO2-224ENST00000514962 PRKRIP1Q9H875 184 aaPredicted RBP8.55□□□□□ -1.04
CALCOCO2-224ENST00000514962 FMN1Q68DA7 1419 aa8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 HMGXB3Q12766 1538 aa8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 FGD5Q6ZNL6 1462 aa8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 CCDC7Q96M83 1385 aa8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 TCERG1O14776 1098 aaKnown RBP8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 HSPA5P11021 654 aaKnown RBP8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 MS4A1P11836 297 aa8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 PSEN1P49768 467 aa8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 EIF4G2P78344 907 aaKnown RBP eCLIP8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 NUDCQ9Y266 331 aa8.54□□□□□ -1.04
CALCOCO2-224ENST00000514962 CCDC9Q9Y3X0 531 aaKnown RBP8.53□□□□□ -1.04
CALCOCO2-224ENST00000514962 AKNAQ7Z591 1439 aa8.53□□□□□ -1.04
CALCOCO2-224ENST00000514962 IGF1RP08069 1367 aa8.52□□□□□ -1.05
CALCOCO2-224ENST00000514962 PLCG2P16885 1265 aa8.52□□□□□ -1.05
CALCOCO2-224ENST00000514962 MKRN3Q13064 507 aaKnown RBP8.52□□□□□ -1.05
CALCOCO2-224ENST00000514962 MAMSTRQ6ZN01 415 aa8.52□□□□□ -1.05
CALCOCO2-224ENST00000514962 MRS2Q9HD23 443 aa8.52□□□□□ -1.05
CALCOCO2-224ENST00000514962 NAIPQ13075 1403 aa8.52□□□□□ -1.05
CALCOCO2-224ENST00000514962 THOC2Q8NI27 1593 aaKnown RBP8.52□□□□□ -1.05
CALCOCO2-224ENST00000514962 DDRGK1Q96HY6 314 aa8.51□□□□□ -1.05
CALCOCO2-224ENST00000514962 VGFO15240 615 aaPredicted RBP8.5□□□□□ -1.05
CALCOCO2-224ENST00000514962 NEFMP07197 916 aa8.5□□□□□ -1.05
CALCOCO2-224ENST00000514962 CFTRP13569 1480 aa8.5□□□□□ -1.05
CALCOCO2-224ENST00000514962 CARMIL1Q5VZK9 1371 aa8.49□□□□□ -1.05
CALCOCO2-224ENST00000514962 HMGB1P09429 215 aaKnown RBP8.49□□□□□ -1.05
CALCOCO2-224ENST00000514962 CCDC184Q52MB2 194 aa8.49□□□□□ -1.05
CALCOCO2-224ENST00000514962 FAM9BQ8IZU0 186 aa8.49□□□□□ -1.05
CALCOCO2-224ENST00000514962 RSPH6AQ9H0K4 717 aa8.49□□□□□ -1.05
CALCOCO2-224ENST00000514962 SCUBE2Q9NQ36 999 aa8.49□□□□□ -1.05
CALCOCO2-224ENST00000514962 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
CALCOCO2-224ENST00000514962 SUPT6HQ7KZ85 1726 aaKnown RBP8.48□□□□□ -1.05
CALCOCO2-224ENST00000514962 MYOM3Q5VTT5 1437 aa8.47□□□□□ -1.05
CALCOCO2-224ENST00000514962 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
CALCOCO2-224ENST00000514962 TCOF1Q13428 1488 aaKnown RBP8.47□□□□□ -1.05
CALCOCO2-224ENST00000514962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.47□□□□□ -1.05
CALCOCO2-224ENST00000514962 STK25O00506 426 aa8.47□□□□□ -1.05
CALCOCO2-224ENST00000514962 ZFP91Q96JP5 570 aaPredicted RBP8.47□□□□□ -1.05
CALCOCO2-224ENST00000514962 EHBP1L1Q8N3D4 1523 aa8.47□□□□□ -1.05
CALCOCO2-224ENST00000514962 KIF21AQ7Z4S6 1674 aa8.46□□□□□ -1.05
CALCOCO2-224ENST00000514962 PTPRKQ15262 1439 aa8.46□□□□□ -1.05
CALCOCO2-224ENST00000514962 ZBTB7CA1YPR0 619 aa8.46□□□□□ -1.06
CALCOCO2-224ENST00000514962 ARID4BQ4LE39 1312 aaPredicted RBP8.46□□□□□ -1.06
CALCOCO2-224ENST00000514962 SPATA31E1Q6ZUB1 1445 aa8.46□□□□□ -1.06
CALCOCO2-224ENST00000514962 MIA2Q96PC5 1412 aa8.46□□□□□ -1.06
CALCOCO2-224ENST00000514962 CC2D2AQ9P2K1 1620 aa8.45□□□□□ -1.06
CALCOCO2-224ENST00000514962 PDE4AP27815 886 aa8.45□□□□□ -1.06
CALCOCO2-224ENST00000514962 FAM43AQ8N2R8 423 aa8.45□□□□□ -1.06
CALCOCO2-224ENST00000514962 BACH2Q9BYV9 841 aa8.45□□□□□ -1.06
CALCOCO2-224ENST00000514962 OCEL1Q9H607 264 aa8.45□□□□□ -1.06
CALCOCO2-224ENST00000514962 CABP2Q9NPB3 220 aa8.45□□□□□ -1.06
CALCOCO2-224ENST00000514962 CUL7Q14999 1698 aa8.45□□□□□ -1.06
CALCOCO2-224ENST00000514962 SNAPC4Q5SXM2 1469 aa8.45□□□□□ -1.06
CALCOCO2-224ENST00000514962 ARHGEF11O15085 1522 aa8.44□□□□□ -1.06
CALCOCO2-224ENST00000514962 POTEB2H3BUK9 544 aa8.44□□□□□ -1.06
CALCOCO2-224ENST00000514962 COLQQ9Y215 455 aaPredicted RBP8.44□□□□□ -1.06
CALCOCO2-224ENST00000514962 STK24Q9Y6E0 443 aa8.44□□□□□ -1.06
CALCOCO2-224ENST00000514962 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
CALCOCO2-224ENST00000514962 DENND4BO75064 1496 aaPredicted RBP8.44□□□□□ -1.06
CALCOCO2-224ENST00000514962 IRX5P78411 483 aaPredicted RBP8.43□□□□□ -1.06
CALCOCO2-224ENST00000514962 BCL11BQ9C0K0 894 aaPredicted RBP8.43□□□□□ -1.06
CALCOCO2-224ENST00000514962 DHX29Q7Z478 1369 aaKnown RBP8.43□□□□□ -1.06
CALCOCO2-224ENST00000514962 FHOD3Q2V2M9 1422 aa8.43□□□□□ -1.06
CALCOCO2-224ENST00000514962 RPRD2Q5VT52 1461 aaKnown RBP8.43□□□□□ -1.06
CALCOCO2-224ENST00000514962 UGGT2Q9NYU1 1516 aa8.43□□□□□ -1.06
CALCOCO2-224ENST00000514962 POTEFA5A3E0 1075 aa8.42□□□□□ -1.06
CALCOCO2-224ENST00000514962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.42□□□□□ -1.064e-7■■■□□ 18.9
CALCOCO2-224ENST00000514962 LAS1LQ9Y4W2 734 aaKnown RBP8.42□□□□□ -1.06
CALCOCO2-224ENST00000514962 KIF7Q2M1P5 1343 aa8.42□□□□□ -1.06
CALCOCO2-224ENST00000514962 ROCK2O75116 1388 aaKnown RBP8.42□□□□□ -1.06
CALCOCO2-224ENST00000514962 MTUS2Q5JR59 1369 aa8.42□□□□□ -1.06
CALCOCO2-224ENST00000514962 TEX14Q8IWB6 1497 aa8.42□□□□□ -1.06
CALCOCO2-224ENST00000514962 SAMD9Q5K651 1589 aa8.41□□□□□ -1.06
CALCOCO2-224ENST00000514962 RRP1P56182 461 aaKnown RBP8.41□□□□□ -1.06
CALCOCO2-224ENST00000514962 PDE3BQ13370 1112 aa8.41□□□□□ -1.06
CALCOCO2-224ENST00000514962 OTUD5Q96G74 571 aa8.41□□□□□ -1.06
CALCOCO2-224ENST00000514962 PLSCR2Q9NRY7 297 aa8.41□□□□□ -1.06
CALCOCO2-224ENST00000514962 GRIN2BQ13224 1484 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms