RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 PPP4R2Q9NY27 417 aa23.89■■□□□ 1.41
SNX2-213ENST00000514949 MYO5CQ9NQX4 1742 aa23.89■■□□□ 1.41
SNX2-213ENST00000514949 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
SNX2-213ENST00000514949 SMG6Q86US8 1419 aaKnown RBP23.87■■□□□ 1.41
SNX2-213ENST00000514949 PRAG1Q86YV5 1406 aa23.87■■□□□ 1.41
SNX2-213ENST00000514949 IQGAP3Q86VI3 1631 aa23.87■■□□□ 1.41
SNX2-213ENST00000514949 E9PCH4 1651 aa23.87■■□□□ 1.41
SNX2-213ENST00000514949 PLA2R1Q13018 1463 aa23.87■■□□□ 1.41
SNX2-213ENST00000514949 TRPM1Q7Z4N2 1603 aa23.87■■□□□ 1.41
SNX2-213ENST00000514949 CCDC144AA2RUR9 1427 aa23.86■■□□□ 1.41
SNX2-213ENST00000514949 ATP10AO60312 1499 aa23.86■■□□□ 1.41
SNX2-213ENST00000514949 MAGI2Q86UL8 1455 aa23.85■■□□□ 1.41
SNX2-213ENST00000514949 GPRASP1Q5JY77 1395 aa23.85■■□□□ 1.41
SNX2-213ENST00000514949 ST20-MTHFSA0A0A6YYL1 179 aa23.85■■□□□ 1.41
SNX2-213ENST00000514949 LAMC1P11047 1609 aa23.84■■□□□ 1.41
SNX2-213ENST00000514949 DUOX2Q9NRD8 1548 aa23.83■■□□□ 1.41
SNX2-213ENST00000514949 PNISRQ8TF01 805 aaKnown RBP23.83■■□□□ 1.4
SNX2-213ENST00000514949 IRX6P78412 446 aaPredicted RBP23.82■■□□□ 1.4
SNX2-213ENST00000514949 KDM2AQ9Y2K7 1162 aa23.82■■□□□ 1.4
SNX2-213ENST00000514949 UHRF1BP1LA0JNW5 1464 aa23.81■■□□□ 1.4
SNX2-213ENST00000514949 ERBINQ96RT1 1412 aa23.8■■□□□ 1.4
SNX2-213ENST00000514949 ERCC6L2Q5T890 1561 aa23.8■■□□□ 1.4
SNX2-213ENST00000514949 RALBP1Q15311 655 aa23.8■■□□□ 1.4
SNX2-213ENST00000514949 PLCH2O75038 1416 aa23.79■■□□□ 1.4
SNX2-213ENST00000514949 LRPPRCP42704 1394 aaKnown RBP23.79■■□□□ 1.4
SNX2-213ENST00000514949 ANP32EQ9BTT0 268 aa23.79■■□□□ 1.4
SNX2-213ENST00000514949 RNF123Q5XPI4 1314 aa23.79■■□□□ 1.4
SNX2-213ENST00000514949 BRD4O60885 1362 aaPredicted RBP23.78■■□□□ 1.4
SNX2-213ENST00000514949 POLR3GLQ9BT43 218 aa23.78■■□□□ 1.4
SNX2-213ENST00000514949 A2MP01023 1474 aa23.77■■□□□ 1.4
SNX2-213ENST00000514949 NUDCQ9Y266 331 aa23.75■■□□□ 1.39
SNX2-213ENST00000514949 MYBBP1AQ9BQG0 1328 aaKnown RBP23.75■■□□□ 1.39
SNX2-213ENST00000514949 EIF2AK4Q9P2K8 1649 aaKnown RBP23.75■■□□□ 1.39
SNX2-213ENST00000514949 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
SNX2-213ENST00000514949 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
SNX2-213ENST00000514949 TMC1Q8TDI8 760 aa23.73■■□□□ 1.39
SNX2-213ENST00000514949 ZCCHC11Q5TAX3 1644 aaKnown RBP23.73■■□□□ 1.39
SNX2-213ENST00000514949 ABCC1P33527 1531 aa23.72■■□□□ 1.39
SNX2-213ENST00000514949 ARAP3Q8WWN8 1544 aa23.7■■□□□ 1.38
SNX2-213ENST00000514949 EFCAB2Q5VUJ9 269 aa23.7■■□□□ 1.38
SNX2-213ENST00000514949 PARD3Q8TEW0 1356 aa23.7■■□□□ 1.38
SNX2-213ENST00000514949 WASHC2CQ9Y4E1 1318 aa23.69■■□□□ 1.38
SNX2-213ENST00000514949 COL17A1Q9UMD9 1497 aaPredicted RBP23.69■■□□□ 1.38
SNX2-213ENST00000514949 FANCIQ9NVI1 1328 aa23.69■■□□□ 1.38
SNX2-213ENST00000514949 NBPF1Q3BBV0 1214 aa23.66■■□□□ 1.38
SNX2-213ENST00000514949 RTEL1-TNFRSF6BF6WH68 1400 aa23.66■■□□□ 1.38
SNX2-213ENST00000514949 PER1O15534 1290 aaPredicted RBP23.66■■□□□ 1.38
SNX2-213ENST00000514949 TESK2Q96S53 571 aa23.65■■□□□ 1.38
SNX2-213ENST00000514949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.65■■□□□ 1.381e-7■■■□□ 16.8
SNX2-213ENST00000514949 RGL3Q3MIN7 710 aa23.64■■□□□ 1.37
SNX2-213ENST00000514949 RNF17Q9BXT8 1623 aaKnown RBP23.64■■□□□ 1.37
SNX2-213ENST00000514949 NLRP13Q86W25 1043 aa23.63■■□□□ 1.37
SNX2-213ENST00000514949 INSRP06213 1382 aa23.63■■□□□ 1.37
SNX2-213ENST00000514949 TRAPPC8Q9Y2L5 1435 aa23.62■■□□□ 1.37
SNX2-213ENST00000514949 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
SNX2-213ENST00000514949 B4GALNT3Q6L9W6 998 aa23.6■■□□□ 1.37
SNX2-213ENST00000514949 CNGB1Q14028 1251 aaPredicted RBP23.59■■□□□ 1.37
SNX2-213ENST00000514949 STAC3Q96MF2 364 aa23.58■■□□□ 1.37
SNX2-213ENST00000514949 DISP3Q9P2K9 1392 aa23.57■■□□□ 1.36
SNX2-213ENST00000514949 ZFYVE16Q7Z3T8 1539 aa23.57■■□□□ 1.36
SNX2-213ENST00000514949 DEPDC5O75140 1603 aa23.57■■□□□ 1.36
SNX2-213ENST00000514949 PTPRTO14522 1441 aa23.56■■□□□ 1.36
SNX2-213ENST00000514949 TRPM2O94759 1503 aa23.56■■□□□ 1.36
SNX2-213ENST00000514949 MADDQ8WXG6 1647 aa23.53■■□□□ 1.36
SNX2-213ENST00000514949 TMF1P82094 1093 aa23.53■■□□□ 1.36
SNX2-213ENST00000514949 SPAG9O60271 1321 aaKnown RBP23.53■■□□□ 1.36
SNX2-213ENST00000514949 PDE3BQ13370 1112 aa23.53■■□□□ 1.36
SNX2-213ENST00000514949 CEP152O94986 1710 aa23.51■■□□□ 1.35
SNX2-213ENST00000514949 NEURL4Q96JN8 1562 aa23.51■■□□□ 1.35
SNX2-213ENST00000514949 MSH5O43196 834 aa23.51■■□□□ 1.35
SNX2-213ENST00000514949 IQGAP1P46940 1657 aa23.5■■□□□ 1.35
SNX2-213ENST00000514949 SPHKAPQ2M3C7 1700 aa23.5■■□□□ 1.35
SNX2-213ENST00000514949 VWDEQ8N2E2 1590 aa23.5■■□□□ 1.35
SNX2-213ENST00000514949 SCAPERQ9BY12 1400 aa23.49■■□□□ 1.35
SNX2-213ENST00000514949 TET3O43151 1660 aa23.49■■□□□ 1.35
SNX2-213ENST00000514949 ABCA9Q8IUA7 1624 aa23.48■■□□□ 1.35
SNX2-213ENST00000514949 INO80Q9ULG1 1556 aaPredicted RBP23.47■■□□□ 1.35
SNX2-213ENST00000514949 WDR7Q9Y4E6 1490 aa23.47■■□□□ 1.35
SNX2-213ENST00000514949 PANK3Q9H999 370 aa23.47■■□□□ 1.35
SNX2-213ENST00000514949 BLMP54132 1417 aaPredicted RBP23.47■■□□□ 1.35
SNX2-213ENST00000514949 AFAP1Q8N556 730 aa23.45■■□□□ 1.34
SNX2-213ENST00000514949 CLTCL1P53675 1640 aa23.43■■□□□ 1.34
SNX2-213ENST00000514949 ATP7AQ04656 1500 aa23.43■■□□□ 1.34
SNX2-213ENST00000514949 KIAA1210Q9ULL0 1709 aa23.42■■□□□ 1.34
SNX2-213ENST00000514949 CCDC136Q96JN2 1154 aa23.42■■□□□ 1.34
SNX2-213ENST00000514949 SCAF11Q99590 1463 aaKnown RBP23.42■■□□□ 1.34
SNX2-213ENST00000514949 FANCAO15360 1455 aa23.41■■□□□ 1.34
SNX2-213ENST00000514949 RRP1P56182 461 aaKnown RBP23.4■■□□□ 1.34
SNX2-213ENST00000514949 CDCA8Q53HL2 280 aa23.39■■□□□ 1.33
SNX2-213ENST00000514949 SYNMO15061 1565 aa23.39■■□□□ 1.33
SNX2-213ENST00000514949 KANK1Q14678 1352 aa23.38■■□□□ 1.33
SNX2-213ENST00000514949 RCAN3Q9UKA8 241 aa23.38■■□□□ 1.33
SNX2-213ENST00000514949 CC2D1BQ5T0F9 858 aaKnown RBP23.38■■□□□ 1.33
SNX2-213ENST00000514949 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
SNX2-213ENST00000514949 NPC1L1Q9UHC9 1359 aa23.34■■□□□ 1.33
SNX2-213ENST00000514949 SENP3-EIF4A1A0A087X0R7 540 aa23.33■■□□□ 1.33
SNX2-213ENST00000514949 ADGRL1O94910 1474 aa23.32■■□□□ 1.32
SNX2-213ENST00000514949 MYOM2P54296 1465 aa23.32■■□□□ 1.32
SNX2-213ENST00000514949 AMER1Q5JTC6 1135 aaPredicted RBP23.32■■□□□ 1.32
SNX2-213ENST00000514949 EIF3AQ14152 1382 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms