RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 HRO43593 1189 aa9.5□□□□□ -0.89
PROM1-217ENST00000514693 HCSTQ9UBK5 93 aa9.5□□□□□ -0.89
PROM1-217ENST00000514693 VPS9D1Q9Y2B5 631 aa9.5□□□□□ -0.89
PROM1-217ENST00000514693 ADAM33Q9BZ11 813 aa9.49□□□□□ -0.89
PROM1-217ENST00000514693 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
PROM1-217ENST00000514693 C14orf37Q86TY3 774 aa9.48□□□□□ -0.89
PROM1-217ENST00000514693 DPYSL4O14531 572 aa9.47□□□□□ -0.89
PROM1-217ENST00000514693 KCTD12Q96CX2 325 aaKnown RBP9.47□□□□□ -0.89
PROM1-217ENST00000514693 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
PROM1-217ENST00000514693 SLC4A5Q9BY07 1137 aa9.46□□□□□ -0.9
PROM1-217ENST00000514693 PCDHGA10Q9Y5H3 936 aa9.46□□□□□ -0.9
PROM1-217ENST00000514693 PHF14O94880 888 aa9.45□□□□□ -0.9
PROM1-217ENST00000514693 TYW1BQ6NUM6 668 aa9.45□□□□□ -0.9
PROM1-217ENST00000514693 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
PROM1-217ENST00000514693 GOLGA8CPA6NN73 597 aa9.44□□□□□ -0.9
PROM1-217ENST00000514693 ZBED2Q9BTP6 218 aa9.44□□□□□ -0.9
PROM1-217ENST00000514693 HOMEZQ8IX15 550 aa9.43□□□□□ -0.9
PROM1-217ENST00000514693 NBPF3Q9H094 633 aa9.43□□□□□ -0.9
PROM1-217ENST00000514693 PPP1R3GB7ZBB8 358 aa9.42□□□□□ -0.9
PROM1-217ENST00000514693 MRPL50Q8N5N7 158 aaKnown RBP9.42□□□□□ -0.9
PROM1-217ENST00000514693 P3H3Q8IVL6 736 aa9.41□□□□□ -0.9
PROM1-217ENST00000514693 EPAS1Q99814 870 aa9.41□□□□□ -0.9
PROM1-217ENST00000514693 E2F4Q16254 413 aa9.4□□□□□ -0.9
PROM1-217ENST00000514693 DDX12PQ92771 950 aa9.39□□□□□ -0.91
PROM1-217ENST00000514693 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
PROM1-217ENST00000514693 BHMG1C9JSJ3 638 aaPredicted RBP9.38□□□□□ -0.91
PROM1-217ENST00000514693 PTPN5P54829 565 aa9.38□□□□□ -0.91
PROM1-217ENST00000514693 RBM33Q96EV2 1170 aaKnown RBP9.38□□□□□ -0.91
PROM1-217ENST00000514693 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
PROM1-217ENST00000514693 WNT2BQ93097 391 aa9.37□□□□□ -0.91
PROM1-217ENST00000514693 COL9A1P20849 921 aa9.36□□□□□ -0.91
PROM1-217ENST00000514693 PDIA6Q15084 440 aa9.36□□□□□ -0.91
PROM1-217ENST00000514693 C6orf132Q5T0Z8 1188 aa9.36□□□□□ -0.91
PROM1-217ENST00000514693 LMOD2Q6P5Q4 547 aa9.36□□□□□ -0.91
PROM1-217ENST00000514693 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.36□□□□□ -0.91
PROM1-217ENST00000514693 PROX2Q3B8N5 592 aa9.35□□□□□ -0.91
PROM1-217ENST00000514693 RABGEF1Q9UJ41 708 aa9.35□□□□□ -0.91
PROM1-217ENST00000514693 MAP3K7O43318 606 aa9.33□□□□□ -0.92
PROM1-217ENST00000514693 THSD4Q6ZMP0 1018 aa9.33□□□□□ -0.92
PROM1-217ENST00000514693 KCNV2Q8TDN2 545 aa9.32□□□□□ -0.92
PROM1-217ENST00000514693 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
PROM1-217ENST00000514693 ANKK1Q8NFD2 765 aa9.31□□□□□ -0.92
PROM1-217ENST00000514693 KIAA1468Q9P260 1216 aa9.31□□□□□ -0.92
PROM1-217ENST00000514693 EN1Q05925 392 aaPredicted RBP9.3□□□□□ -0.92
PROM1-217ENST00000514693 GRXCR2A6NFK2 248 aa9.29□□□□□ -0.92
PROM1-217ENST00000514693 ONECUT3O60422 494 aaPredicted RBP9.29□□□□□ -0.92
PROM1-217ENST00000514693 LAPTM4BQ86VI4 370 aa9.28□□□□□ -0.92
PROM1-217ENST00000514693 ARIH1Q9Y4X5 557 aaPredicted RBP9.28□□□□□ -0.92
PROM1-217ENST00000514693 TRIM6-TRIM34B2RNG4 842 aa9.27□□□□□ -0.93
PROM1-217ENST00000514693 TSR1Q2NL82 804 aaKnown RBP9.27□□□□□ -0.93
PROM1-217ENST00000514693 SEPT9Q9UHD8 586 aaPredicted RBP9.26□□□□□ -0.93
PROM1-217ENST00000514693 PACS2Q86VP3 889 aa9.25□□□□□ -0.93
PROM1-217ENST00000514693 ZFRQ96KR1 1074 aaKnown RBP9.25□□□□□ -0.93
PROM1-217ENST00000514693 BCAMP50895 628 aa9.23□□□□□ -0.93
PROM1-217ENST00000514693 FAM98CQ17RN3 349 aaKnown RBP9.23□□□□□ -0.93
PROM1-217ENST00000514693 SUPT5HO00267 1087 aaKnown RBP9.22□□□□□ -0.93
PROM1-217ENST00000514693 NEUROD2Q15784 382 aa9.22□□□□□ -0.93
PROM1-217ENST00000514693 CERKQ8TCT0 537 aa9.22□□□□□ -0.93
PROM1-217ENST00000514693 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
PROM1-217ENST00000514693 ZC3H15Q8WU90 426 aaKnown RBP9.2□□□□□ -0.94
PROM1-217ENST00000514693 CDCA7LQ96GN5 454 aa9.2□□□□□ -0.94
PROM1-217ENST00000514693 LRCH3Q96II8 777 aa9.2□□□□□ -0.94
PROM1-217ENST00000514693 TSKSQ9UJT2 592 aa9.2□□□□□ -0.94
PROM1-217ENST00000514693 PRSS12P56730 875 aa9.19□□□□□ -0.94
PROM1-217ENST00000514693 OSBPP22059 807 aa9.18□□□□□ -0.94
PROM1-217ENST00000514693 ARHGEF1Q92888 912 aaKnown RBP9.18□□□□□ -0.94
PROM1-217ENST00000514693 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.18□□□□□ -0.94
PROM1-217ENST00000514693 PRIM1P49642 420 aaKnown RBP9.17□□□□□ -0.94
PROM1-217ENST00000514693 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
PROM1-217ENST00000514693 NBPF26B4DH59 902 aa9.16□□□□□ -0.94
PROM1-217ENST00000514693 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
PROM1-217ENST00000514693 WBP1LQ9NX94 342 aa9.16□□□□□ -0.94
PROM1-217ENST00000514693 IFFO2Q5TF58 517 aa9.15□□□□□ -0.94
PROM1-217ENST00000514693 CDHR5Q9HBB8 845 aa9.15□□□□□ -0.94
PROM1-217ENST00000514693 TSR3Q9UJK0 312 aaKnown RBP9.15□□□□□ -0.94
PROM1-217ENST00000514693 HPS5Q9UPZ3 1129 aa9.15□□□□□ -0.94
PROM1-217ENST00000514693 SMAPO00193 183 aa9.14□□□□□ -0.95
PROM1-217ENST00000514693 PNMA3Q9UL41 463 aa9.13□□□□□ -0.95
PROM1-217ENST00000514693 HDGFP51858 240 aaKnown RBP9.12□□□□□ -0.95
PROM1-217ENST00000514693 TATDN2Q93075 761 aa9.12□□□□□ -0.95
PROM1-217ENST00000514693 PPP4CP60510 307 aa9.11□□□□□ -0.95
PROM1-217ENST00000514693 RBM27Q9P2N5 1060 aaKnown RBP9.11□□□□□ -0.95
PROM1-217ENST00000514693 FAM198AQ9UFP1 575 aa9.11□□□□□ -0.95
PROM1-217ENST00000514693 TESPA1A2RU30 521 aaPredicted RBP9.1□□□□□ -0.95
PROM1-217ENST00000514693 SEMA3EO15041 775 aa9.1□□□□□ -0.95
PROM1-217ENST00000514693 ITGBL1O95965 494 aaPredicted RBP9.1□□□□□ -0.95
PROM1-217ENST00000514693 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
PROM1-217ENST00000514693 A0A0G2JS52 829 aa9.09□□□□□ -0.95
PROM1-217ENST00000514693 RNF40O75150 1001 aa9.09□□□□□ -0.95
PROM1-217ENST00000514693 MLLT3P42568 568 aaPredicted RBP9.09□□□□□ -0.95
PROM1-217ENST00000514693 NUDT18Q6ZVK8 323 aa9.09□□□□□ -0.95
PROM1-217ENST00000514693 RGS20O76081 388 aa9.07□□□□□ -0.96
PROM1-217ENST00000514693 KCNC4Q03721 635 aa9.07□□□□□ -0.96
PROM1-217ENST00000514693 PADI6Q6TGC4 694 aa9.07□□□□□ -0.96
PROM1-217ENST00000514693 NPDC1Q9NQX5 325 aaPredicted RBP9.06□□□□□ -0.96
PROM1-217ENST00000514693 C3orf80F5H4A9 247 aa9.05□□□□□ -0.96
PROM1-217ENST00000514693 ZMYND10O75800 440 aa9.05□□□□□ -0.96
PROM1-217ENST00000514693 SLC4A3P48751 1232 aa9.04□□□□□ -0.96
PROM1-217ENST00000514693 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
PROM1-217ENST00000514693 TTC13Q8NBP0 860 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms