RNA–Protein interactions for RNA: ENST00000514520.5

CNGA1-208, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 2

Gene CNGA1, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-208ENST00000514520 PDIA6Q15084 440 aa9.92□□□□□ -0.82
CNGA1-208ENST00000514520 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
CNGA1-208ENST00000514520 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.91□□□□□ -0.82
CNGA1-208ENST00000514520 TSR1Q2NL82 804 aaKnown RBP9.88□□□□□ -0.83
CNGA1-208ENST00000514520 C6orf132Q5T0Z8 1188 aa9.88□□□□□ -0.83
CNGA1-208ENST00000514520 THSD4Q6ZMP0 1018 aa9.88□□□□□ -0.83
CNGA1-208ENST00000514520 FBXW7Q969H0 707 aa9.88□□□□□ -0.83
CNGA1-208ENST00000514520 RBM33Q96EV2 1170 aaKnown RBP9.88□□□□□ -0.83
CNGA1-208ENST00000514520 PTPN5P54829 565 aa9.86□□□□□ -0.83
CNGA1-208ENST00000514520 E2F4Q16254 413 aa9.85□□□□□ -0.83
CNGA1-208ENST00000514520 EPAS1Q99814 870 aa9.85□□□□□ -0.83
CNGA1-208ENST00000514520 EN1Q05925 392 aaPredicted RBP9.84□□□□□ -0.83
CNGA1-208ENST00000514520 NBR1Q14596 966 aa9.84□□□□□ -0.83
CNGA1-208ENST00000514520 TSHZ2Q9NRE2 1034 aa9.84□□□□□ -0.83
CNGA1-208ENST00000514520 RABGEF1Q9UJ41 708 aa9.84□□□□□ -0.83
CNGA1-208ENST00000514520 ARIH1Q9Y4X5 557 aaPredicted RBP9.84□□□□□ -0.83
CNGA1-208ENST00000514520 MRPL50Q8N5N7 158 aaKnown RBP9.83□□□□□ -0.84
CNGA1-208ENST00000514520 WNT2BQ93097 391 aa9.83□□□□□ -0.84
CNGA1-208ENST00000514520 C3orf80F5H4A9 247 aa9.82□□□□□ -0.84
CNGA1-208ENST00000514520 KIAA1468Q9P260 1216 aa9.82□□□□□ -0.84
CNGA1-208ENST00000514520 FAM198AQ9UFP1 575 aa9.82□□□□□ -0.84
CNGA1-208ENST00000514520 SEPT9Q9UHD8 586 aaPredicted RBP9.81□□□□□ -0.84
CNGA1-208ENST00000514520 NBPF3Q9H094 633 aa9.8□□□□□ -0.84
CNGA1-208ENST00000514520 CDHR5Q9HBB8 845 aa9.8□□□□□ -0.84
CNGA1-208ENST00000514520 TSKSQ9UJT2 592 aa9.8□□□□□ -0.84
CNGA1-208ENST00000514520 TRIM6-TRIM34B2RNG4 842 aa9.79□□□□□ -0.84
CNGA1-208ENST00000514520 BCAMP50895 628 aa9.79□□□□□ -0.84
CNGA1-208ENST00000514520 SPDYE16A6NNV3 312 aaPredicted RBP9.78□□□□□ -0.84
CNGA1-208ENST00000514520 GOLGA8CPA6NN73 597 aa9.77□□□□□ -0.85
CNGA1-208ENST00000514520 OSBPP22059 807 aa9.77□□□□□ -0.85
CNGA1-208ENST00000514520 NISCHQ9Y2I1 1504 aa9.77□□□□□ -0.85
CNGA1-208ENST00000514520 GRXCR2A6NFK2 248 aa9.76□□□□□ -0.85
CNGA1-208ENST00000514520 MAP3K7O43318 606 aa9.76□□□□□ -0.85
CNGA1-208ENST00000514520 ZFRQ96KR1 1074 aaKnown RBP9.75□□□□□ -0.85
CNGA1-208ENST00000514520 KCNV2Q8TDN2 545 aa9.74□□□□□ -0.85
CNGA1-208ENST00000514520 ONECUT3O60422 494 aaPredicted RBP9.73□□□□□ -0.85
CNGA1-208ENST00000514520 LAPTM4BQ86VI4 370 aa9.73□□□□□ -0.85
CNGA1-208ENST00000514520 SOWAHBA6NEL2 793 aa9.72□□□□□ -0.85
CNGA1-208ENST00000514520 ANKK1Q8NFD2 765 aa9.72□□□□□ -0.85
CNGA1-208ENST00000514520 WDR70Q9NW82 654 aa9.72□□□□□ -0.85
CNGA1-208ENST00000514520 SMAPO00193 183 aa9.71□□□□□ -0.86
CNGA1-208ENST00000514520 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.86
CNGA1-208ENST00000514520 CDCA7LQ96GN5 454 aa9.7□□□□□ -0.86
CNGA1-208ENST00000514520 NPDC1Q9NQX5 325 aaPredicted RBP9.7□□□□□ -0.86
CNGA1-208ENST00000514520 WBP1LQ9NX94 342 aa9.7□□□□□ -0.86
CNGA1-208ENST00000514520 FAM98CQ17RN3 349 aaKnown RBP9.69□□□□□ -0.86
CNGA1-208ENST00000514520 PRSS12P56730 875 aa9.68□□□□□ -0.86
CNGA1-208ENST00000514520 IFFO2Q5TF58 517 aa9.66□□□□□ -0.86
CNGA1-208ENST00000514520 TTC13Q8NBP0 860 aa9.65□□□□□ -0.86
CNGA1-208ENST00000514520 ITGBL1O95965 494 aaPredicted RBP9.64□□□□□ -0.87
CNGA1-208ENST00000514520 A0A0G2JS52 829 aa9.63□□□□□ -0.87
CNGA1-208ENST00000514520 RGS20O76081 388 aa9.63□□□□□ -0.87
CNGA1-208ENST00000514520 HPS5Q9UPZ3 1129 aa9.63□□□□□ -0.87
CNGA1-208ENST00000514520 PACS2Q86VP3 889 aa9.62□□□□□ -0.87
CNGA1-208ENST00000514520 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
CNGA1-208ENST00000514520 PADI6Q6TGC4 694 aa9.61□□□□□ -0.87
CNGA1-208ENST00000514520 SAMD7Q7Z3H4 446 aa9.61□□□□□ -0.87
CNGA1-208ENST00000514520 TATDN2Q93075 761 aa9.61□□□□□ -0.87
CNGA1-208ENST00000514520 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.61□□□□□ -0.87
CNGA1-208ENST00000514520 LRCH3Q96II8 777 aa9.6□□□□□ -0.87
CNGA1-208ENST00000514520 PNMA3Q9UL41 463 aa9.6□□□□□ -0.87
CNGA1-208ENST00000514520 NUDT18Q6ZVK8 323 aa9.59□□□□□ -0.87
CNGA1-208ENST00000514520 TSR3Q9UJK0 312 aaKnown RBP9.59□□□□□ -0.87
CNGA1-208ENST00000514520 CERKQ8TCT0 537 aa9.58□□□□□ -0.88
CNGA1-208ENST00000514520 RBM27Q9P2N5 1060 aaKnown RBP9.57□□□□□ -0.88
CNGA1-208ENST00000514520 NBPF26B4DH59 902 aa9.55□□□□□ -0.88
CNGA1-208ENST00000514520 SEMA3EO15041 775 aa9.55□□□□□ -0.88
CNGA1-208ENST00000514520 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
CNGA1-208ENST00000514520 PTGDRQ13258 359 aa9.54□□□□□ -0.88
CNGA1-208ENST00000514520 NYAP1Q6ZVC0 841 aa9.53□□□□□ -0.88
CNGA1-208ENST00000514520 EYA1Q99502 592 aa9.53□□□□□ -0.88
CNGA1-208ENST00000514520 APLP1P51693 650 aa9.52□□□□□ -0.89
CNGA1-208ENST00000514520 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
CNGA1-208ENST00000514520 FAM161AQ3B820 660 aa9.51□□□□□ -0.89
CNGA1-208ENST00000514520 SWT1Q5T5J6 900 aaKnown RBP9.51□□□□□ -0.89
CNGA1-208ENST00000514520 IRX2Q9BZI1 471 aaPredicted RBP9.51□□□□□ -0.89
CNGA1-208ENST00000514520 PPP4CP60510 307 aa9.49□□□□□ -0.89
CNGA1-208ENST00000514520 KCNC4Q03721 635 aa9.49□□□□□ -0.89
CNGA1-208ENST00000514520 MTRQ99707 1265 aa9.48□□□□□ -0.89
CNGA1-208ENST00000514520 ZNF516Q92618 1163 aa9.47□□□□□ -0.89
CNGA1-208ENST00000514520 ADGRG1Q9Y653 693 aa9.47□□□□□ -0.89
CNGA1-208ENST00000514520 GPR37O15354 613 aa9.46□□□□□ -0.9
CNGA1-208ENST00000514520 RNF40O75150 1001 aa9.46□□□□□ -0.9
CNGA1-208ENST00000514520 KDM2AQ9Y2K7 1162 aa9.46□□□□□ -0.9
CNGA1-208ENST00000514520 TESPA1A2RU30 521 aaPredicted RBP9.44□□□□□ -0.9
CNGA1-208ENST00000514520 RBM26Q5T8P6 1007 aaKnown RBP9.44□□□□□ -0.9
CNGA1-208ENST00000514520 P3H3Q8IVL6 736 aa9.44□□□□□ -0.9
CNGA1-208ENST00000514520 NKX2-3Q8TAU0 364 aa9.43□□□□□ -0.9
CNGA1-208ENST00000514520 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
CNGA1-208ENST00000514520 FECHP22830 423 aa9.41□□□□□ -0.9
CNGA1-208ENST00000514520 TMEM134Q9H6X4 195 aa9.39□□□□□ -0.91
CNGA1-208ENST00000514520 RCCD1A6NED2 376 aa9.38□□□□□ -0.91
CNGA1-208ENST00000514520 COPS2P61201 443 aa9.38□□□□□ -0.91
CNGA1-208ENST00000514520 IL21Q9HBE4 155 aa9.38□□□□□ -0.91
CNGA1-208ENST00000514520 SLF2Q8IX21 1173 aa9.37□□□□□ -0.91
CNGA1-208ENST00000514520 LCE2BO14633 110 aa9.36□□□□□ -0.91
CNGA1-208ENST00000514520 FCHSD2O94868 740 aa9.36□□□□□ -0.91
CNGA1-208ENST00000514520 SLC10A3P09131 477 aa9.36□□□□□ -0.91
CNGA1-208ENST00000514520 DNAJB2P25686 324 aa9.36□□□□□ -0.91
CNGA1-208ENST00000514520 HAP1P54257 671 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms