RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 PRDM2Q13029 1718 aa11.39□□□□□ -0.59
GPBP1-208ENST00000514387 HMGB1P09429 215 aaKnown RBP11.39□□□□□ -0.59
GPBP1-208ENST00000514387 TICAM2Q86XR7 235 aa11.38□□□□□ -0.59
GPBP1-208ENST00000514387 L3MBTL2Q969R5 705 aa11.38□□□□□ -0.59
GPBP1-208ENST00000514387 RRAGDQ9NQL2 400 aaPredicted RBP11.38□□□□□ -0.59
GPBP1-208ENST00000514387 ARHGEF11O15085 1522 aa11.38□□□□□ -0.59
GPBP1-208ENST00000514387 HMGXB3Q12766 1538 aa11.38□□□□□ -0.59
GPBP1-208ENST00000514387 TPM2P07951 284 aa11.38□□□□□ -0.59
GPBP1-208ENST00000514387 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
GPBP1-208ENST00000514387 CCDC144AA2RUR9 1427 aa11.38□□□□□ -0.59
GPBP1-208ENST00000514387 FRAT2O75474 233 aaPredicted RBP11.37□□□□□ -0.59
GPBP1-208ENST00000514387 UTP14CQ5TAP6 766 aaKnown RBP11.37□□□□□ -0.59
GPBP1-208ENST00000514387 TMEM51Q9NW97 253 aa11.37□□□□□ -0.59
GPBP1-208ENST00000514387 KDM2BQ8NHM5 1336 aa11.36□□□□□ -0.59
GPBP1-208ENST00000514387 MYBBP1AQ9BQG0 1328 aaKnown RBP11.36□□□□□ -0.59
GPBP1-208ENST00000514387 MTUS2Q5JR59 1369 aa11.36□□□□□ -0.59
GPBP1-208ENST00000514387 KCNA4P22459 653 aa11.36□□□□□ -0.59
GPBP1-208ENST00000514387 ANKRD30BQ9BXX2 1392 aa11.36□□□□□ -0.59
GPBP1-208ENST00000514387 CFTRP13569 1480 aa11.36□□□□□ -0.59
GPBP1-208ENST00000514387 BECN1Q14457 450 aa11.36□□□□□ -0.59
GPBP1-208ENST00000514387 SNAPC4Q5SXM2 1469 aa11.36□□□□□ -0.59
GPBP1-208ENST00000514387 TMEM132AQ24JP5 1023 aa11.35□□□□□ -0.59
GPBP1-208ENST00000514387 UGGT2Q9NYU1 1516 aa11.35□□□□□ -0.59
GPBP1-208ENST00000514387 SMAP1Q8IYB5 467 aaPredicted RBP11.35□□□□□ -0.59
GPBP1-208ENST00000514387 RGS3P49796 1198 aa11.34□□□□□ -0.59
GPBP1-208ENST00000514387 RGS22Q8NE09 1264 aa11.34□□□□□ -0.59
GPBP1-208ENST00000514387 VIRMAQ69YN4 1812 aaKnown RBP11.34□□□□□ -0.59
GPBP1-208ENST00000514387 KIF21AQ7Z4S6 1674 aa11.34□□□□□ -0.59
GPBP1-208ENST00000514387 MPHOSPH9Q99550 1183 aa11.34□□□□□ -0.59
GPBP1-208ENST00000514387 MBD5Q9P267 1494 aa11.33□□□□□ -0.6
GPBP1-208ENST00000514387 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
GPBP1-208ENST00000514387 KIF14Q15058 1648 aa11.33□□□□□ -0.6
GPBP1-208ENST00000514387 FSD2A1L4K1 749 aa11.33□□□□□ -0.6
GPBP1-208ENST00000514387 ZMYM3Q14202 1370 aa11.32□□□□□ -0.6
GPBP1-208ENST00000514387 C8orf34Q49A92 452 aa11.32□□□□□ -0.6
GPBP1-208ENST00000514387 CTTNBP2Q8WZ74 1663 aa11.32□□□□□ -0.6
GPBP1-208ENST00000514387 CC2D2AQ9P2K1 1620 aa11.32□□□□□ -0.6
GPBP1-208ENST00000514387 KCNG1Q9UIX4 513 aa11.32□□□□□ -0.6
GPBP1-208ENST00000514387 TERF1P54274 439 aa11.31□□□□□ -0.6
GPBP1-208ENST00000514387 MAP7D2Q96T17 732 aa11.31□□□□□ -0.6
GPBP1-208ENST00000514387 KDM5CP41229 1560 aa11.31□□□□□ -0.6
GPBP1-208ENST00000514387 GOLGA6L3A6NEY3 463 aa11.31□□□□□ -0.6
GPBP1-208ENST00000514387 NBPF8Q3BBV2 869 aa11.31□□□□□ -0.6
GPBP1-208ENST00000514387 ZNF830Q96NB3 372 aaPredicted RBP11.31□□□□□ -0.6
GPBP1-208ENST00000514387 CUL7Q14999 1698 aa11.31□□□□□ -0.6
GPBP1-208ENST00000514387 EIF3AQ14152 1382 aaKnown RBP11.3□□□□□ -0.6
GPBP1-208ENST00000514387 FHOD3Q2V2M9 1422 aa11.3□□□□□ -0.6
GPBP1-208ENST00000514387 FOXD1Q16676 465 aa11.3□□□□□ -0.6
GPBP1-208ENST00000514387 E9PCH4 1651 aa11.3□□□□□ -0.6
GPBP1-208ENST00000514387 MRE11P49959 708 aa11.29□□□□□ -0.6
GPBP1-208ENST00000514387 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
GPBP1-208ENST00000514387 UHRF1BP1Q6BDS2 1440 aa11.29□□□□□ -0.6
GPBP1-208ENST00000514387 GRIN2BQ13224 1484 aa11.29□□□□□ -0.6
GPBP1-208ENST00000514387 CNPY4Q8N129 248 aa11.29□□□□□ -0.6
GPBP1-208ENST00000514387 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.29□□□□□ -0.6
GPBP1-208ENST00000514387 BLMP54132 1417 aaPredicted RBP11.29□□□□□ -0.6
GPBP1-208ENST00000514387 USP47Q96K76 1375 aa11.28□□□□□ -0.6
GPBP1-208ENST00000514387 NLRP13Q86W25 1043 aa11.28□□□□□ -0.6
GPBP1-208ENST00000514387 SAMD9Q5K651 1589 aa11.28□□□□□ -0.6
GPBP1-208ENST00000514387 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.28□□□□□ -0.6
GPBP1-208ENST00000514387 CRBNQ96SW2 442 aa11.27□□□□□ -0.6
GPBP1-208ENST00000514387 GAPVD1Q14C86 1478 aa11.27□□□□□ -0.6
GPBP1-208ENST00000514387 PUS7Q96PZ0 661 aaKnown RBP11.27□□□□□ -0.61
GPBP1-208ENST00000514387 RALGAPBQ86X10 1494 aa11.26□□□□□ -0.61
GPBP1-208ENST00000514387 POGKQ9P215 609 aa11.26□□□□□ -0.61
GPBP1-208ENST00000514387 MCCP23508 829 aa11.26□□□□□ -0.61
GPBP1-208ENST00000514387 CCDC9Q9Y3X0 531 aaKnown RBP11.26□□□□□ -0.61
GPBP1-208ENST00000514387 CLGNO14967 610 aa11.25□□□□□ -0.61
GPBP1-208ENST00000514387 XRCC6P12956 609 aaKnown RBP eCLIP11.25□□□□□ -0.61
GPBP1-208ENST00000514387 SLC4A3P48751 1232 aa11.25□□□□□ -0.61
GPBP1-208ENST00000514387 CLSTN1O94985 981 aa11.25□□□□□ -0.61
GPBP1-208ENST00000514387 PARD3Q8TEW0 1356 aa11.25□□□□□ -0.61
GPBP1-208ENST00000514387 SLC20A2Q08357 652 aa11.25□□□□□ -0.61
GPBP1-208ENST00000514387 SCAPERQ9BY12 1400 aa11.25□□□□□ -0.61
GPBP1-208ENST00000514387 ARHGEF12Q9NZN5 1544 aa11.24□□□□□ -0.61
GPBP1-208ENST00000514387 MAPK8IP3Q9UPT6 1336 aa11.24□□□□□ -0.61
GPBP1-208ENST00000514387 PTMSP20962 102 aa11.24□□□□□ -0.61
GPBP1-208ENST00000514387 MTERF4Q7Z6M4 381 aaKnown RBP11.24□□□□□ -0.61
GPBP1-208ENST00000514387 ESPNB1AK53 854 aa11.23□□□□□ -0.61
GPBP1-208ENST00000514387 ANTXR1Q9H6X2 564 aa11.23□□□□□ -0.61
GPBP1-208ENST00000514387 KDM6BO15054 1643 aa11.23□□□□□ -0.61
GPBP1-208ENST00000514387 ANP32BQ92688 251 aaKnown RBP11.22□□□□□ -0.61
GPBP1-208ENST00000514387 PSEN1P49768 467 aa11.22□□□□□ -0.61
GPBP1-208ENST00000514387 ATP1B4Q9UN42 357 aaPredicted RBP11.22□□□□□ -0.61
GPBP1-208ENST00000514387 LRRIQ1Q96JM4 1722 aa11.22□□□□□ -0.61
GPBP1-208ENST00000514387 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
GPBP1-208ENST00000514387 NINLQ9Y2I6 1382 aa11.21□□□□□ -0.61
GPBP1-208ENST00000514387 MYH16Q9H6N6 1097 aa11.21□□□□□ -0.62
GPBP1-208ENST00000514387 AXDND1Q5T1B0 1012 aaPredicted RBP11.2□□□□□ -0.62
GPBP1-208ENST00000514387 ZNF622Q969S3 477 aaKnown RBP eCLIP11.2□□□□□ -0.621e-7■□□□□ 10.1
GPBP1-208ENST00000514387 IGSF3O75054 1194 aa11.2□□□□□ -0.62
GPBP1-208ENST00000514387 RRP7BPQ9NSQ0 103 aa11.2□□□□□ -0.62
GPBP1-208ENST00000514387 PTMAP06454 111 aaKnown RBP11.19□□□□□ -0.62
GPBP1-208ENST00000514387 USP19O94966 1318 aa11.19□□□□□ -0.62
GPBP1-208ENST00000514387 MCM4P33991 863 aa11.19□□□□□ -0.62
GPBP1-208ENST00000514387 ABCA10Q8WWZ4 1543 aa11.18□□□□□ -0.62
GPBP1-208ENST00000514387 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
GPBP1-208ENST00000514387 DMTNQ08495 405 aa11.18□□□□□ -0.62
GPBP1-208ENST00000514387 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
GPBP1-208ENST00000514387 DNMT1P26358 1616 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms