RNA–Protein interactions for RNA: ENST00000514352.5

CCSER1-212, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-212ENST00000514352 DDX27Q96GQ7 796 aaKnown RBP9.24□□□□□ -0.93
CCSER1-212ENST00000514352 ZFRQ96KR1 1074 aaKnown RBP9.24□□□□□ -0.93
CCSER1-212ENST00000514352 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
CCSER1-212ENST00000514352 LARP6Q9BRS8 491 aaKnown RBP9.23□□□□□ -0.93
CCSER1-212ENST00000514352 PCDHGA10Q9Y5H3 936 aa9.23□□□□□ -0.93
CCSER1-212ENST00000514352 TYW1BQ6NUM6 668 aa9.22□□□□□ -0.93
CCSER1-212ENST00000514352 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
CCSER1-212ENST00000514352 PHF14O94880 888 aa9.21□□□□□ -0.94
CCSER1-212ENST00000514352 WBP1LQ9NX94 342 aa9.21□□□□□ -0.94
CCSER1-212ENST00000514352 COL9A1P20849 921 aa9.2□□□□□ -0.94
CCSER1-212ENST00000514352 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
CCSER1-212ENST00000514352 TRAF7Q6Q0C0 670 aa9.2□□□□□ -0.94
CCSER1-212ENST00000514352 TSR3Q9UJK0 312 aaKnown RBP9.19□□□□□ -0.94
CCSER1-212ENST00000514352 GFRA3O60609 400 aa9.18□□□□□ -0.94
CCSER1-212ENST00000514352 EPAS1Q99814 870 aa9.17□□□□□ -0.94
CCSER1-212ENST00000514352 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.17□□□□□ -0.94
CCSER1-212ENST00000514352 MFSD10Q14728 455 aa9.16□□□□□ -0.94
CCSER1-212ENST00000514352 FAM98CQ17RN3 349 aaKnown RBP9.16□□□□□ -0.94
CCSER1-212ENST00000514352 LRCH3Q96II8 777 aa9.15□□□□□ -0.94
CCSER1-212ENST00000514352 C6orf132Q5T0Z8 1188 aa9.14□□□□□ -0.95
CCSER1-212ENST00000514352 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
CCSER1-212ENST00000514352 EMILIN3Q9NT22 766 aa9.13□□□□□ -0.95
CCSER1-212ENST00000514352 HPS5Q9UPZ3 1129 aa9.13□□□□□ -0.95
CCSER1-212ENST00000514352 SEPT9Q9UHD8 586 aaPredicted RBP9.12□□□□□ -0.95
CCSER1-212ENST00000514352 PPP4CP60510 307 aa9.11□□□□□ -0.95
CCSER1-212ENST00000514352 NRG2O14511 850 aaPredicted RBP9.1□□□□□ -0.95
CCSER1-212ENST00000514352 PACS2Q86VP3 889 aa9.1□□□□□ -0.95
CCSER1-212ENST00000514352 GTPBP6O43824 516 aaPredicted RBP9.08□□□□□ -0.96
CCSER1-212ENST00000514352 PRKD2Q9BZL6 878 aa9.08□□□□□ -0.96
CCSER1-212ENST00000514352 V9GY48 417 aaPredicted RBP9.08□□□□□ -0.96
CCSER1-212ENST00000514352 LCE2BO14633 110 aa9.04□□□□□ -0.96
CCSER1-212ENST00000514352 TJAP1Q5JTD0 557 aa9.03□□□□□ -0.96
CCSER1-212ENST00000514352 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
CCSER1-212ENST00000514352 RBM33Q96EV2 1170 aaKnown RBP9.02□□□□□ -0.97
CCSER1-212ENST00000514352 IL21Q9HBE4 155 aa9.02□□□□□ -0.97
CCSER1-212ENST00000514352 HDGFP51858 240 aaKnown RBP9.01□□□□□ -0.97
CCSER1-212ENST00000514352 PPP1R18Q6NYC8 613 aa9.01□□□□□ -0.97
CCSER1-212ENST00000514352 CAMK2BQ13554 666 aa9□□□□□ -0.97
CCSER1-212ENST00000514352 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.99□□□□□ -0.97
CCSER1-212ENST00000514352 TSKSQ9UJT2 592 aa8.98□□□□□ -0.97
CCSER1-212ENST00000514352 DPYSL4O14531 572 aa8.97□□□□□ -0.97
CCSER1-212ENST00000514352 GGCXP38435 758 aa8.97□□□□□ -0.97
CCSER1-212ENST00000514352 CERKQ8TCT0 537 aa8.97□□□□□ -0.97
CCSER1-212ENST00000514352 DDX12PQ92771 950 aa8.97□□□□□ -0.97
CCSER1-212ENST00000514352 MTRQ99707 1265 aa8.97□□□□□ -0.97
CCSER1-212ENST00000514352 PDZRN3Q9UPQ7 1066 aa8.97□□□□□ -0.97
CCSER1-212ENST00000514352 MAP3K7O43318 606 aa8.96□□□□□ -0.98
CCSER1-212ENST00000514352 EN1Q05925 392 aaPredicted RBP8.96□□□□□ -0.98
CCSER1-212ENST00000514352 SAMD7Q7Z3H4 446 aa8.96□□□□□ -0.98
CCSER1-212ENST00000514352 NECTIN2Q92692 538 aa8.96□□□□□ -0.98
CCSER1-212ENST00000514352 NBR1Q14596 966 aa8.93□□□□□ -0.98
CCSER1-212ENST00000514352 CDCA7LQ96GN5 454 aa8.93□□□□□ -0.98
CCSER1-212ENST00000514352 TMUB1Q9BVT8 246 aa8.93□□□□□ -0.98
CCSER1-212ENST00000514352 PRSS12P56730 875 aa8.92□□□□□ -0.98
CCSER1-212ENST00000514352 NBPF26B4DH59 902 aa8.91□□□□□ -0.98
CCSER1-212ENST00000514352 TATDN2Q93075 761 aa8.91□□□□□ -0.98
CCSER1-212ENST00000514352 ZNF775Q96BV0 537 aaPredicted RBP8.91□□□□□ -0.98
CCSER1-212ENST00000514352 TSR1Q2NL82 804 aaKnown RBP8.9□□□□□ -0.98
CCSER1-212ENST00000514352 CADPS2Q86UW7 1296 aa8.9□□□□□ -0.98
CCSER1-212ENST00000514352 ZNF516Q92618 1163 aa8.9□□□□□ -0.98
CCSER1-212ENST00000514352 SPDYE16A6NNV3 312 aaPredicted RBP8.89□□□□□ -0.99
CCSER1-212ENST00000514352 SMAPO00193 183 aa8.89□□□□□ -0.99
CCSER1-212ENST00000514352 PNMA3Q9UL41 463 aa8.89□□□□□ -0.99
CCSER1-212ENST00000514352 RNF40O75150 1001 aa8.86□□□□□ -0.99
CCSER1-212ENST00000514352 SLC4A3P48751 1232 aa8.86□□□□□ -0.99
CCSER1-212ENST00000514352 PDIA6Q15084 440 aa8.86□□□□□ -0.99
CCSER1-212ENST00000514352 APLP1P51693 650 aa8.84□□□□□ -0.99
CCSER1-212ENST00000514352 NKX2-3Q8TAU0 364 aa8.84□□□□□ -0.99
CCSER1-212ENST00000514352 PKDCCQ504Y2 493 aa8.83□□□□□ -1
CCSER1-212ENST00000514352 SLF2Q8IX21 1173 aa8.83□□□□□ -1
CCSER1-212ENST00000514352 RBM27Q9P2N5 1060 aaKnown RBP8.83□□□□□ -1
CCSER1-212ENST00000514352 DGAT1O75907 488 aa8.82□□□□□ -1
CCSER1-212ENST00000514352 NUDT18Q6ZVK8 323 aa8.82□□□□□ -1
CCSER1-212ENST00000514352 PRR14Q9BWN1 585 aa8.82□□□□□ -1
CCSER1-212ENST00000514352 FAM198AQ9UFP1 575 aa8.82□□□□□ -1
CCSER1-212ENST00000514352 DCAF8L2P0C7V8 631 aa8.81□□□□□ -1
CCSER1-212ENST00000514352 ZPR1O75312 459 aa8.8□□□□□ -1
CCSER1-212ENST00000514352 SLC19A1P41440 591 aa8.8□□□□□ -1
CCSER1-212ENST00000514352 COPS2P61201 443 aa8.8□□□□□ -1
CCSER1-212ENST00000514352 GRXCR2A6NFK2 248 aa8.77□□□□□ -1.01
CCSER1-212ENST00000514352 C3orf80F5H4A9 247 aa8.77□□□□□ -1.01
CCSER1-212ENST00000514352 MYT1Q01538 1121 aa8.77□□□□□ -1.01
CCSER1-212ENST00000514352 PRR20EP86478 221 aa8.76□□□□□ -1.01
CCSER1-212ENST00000514352 PRR20CP86479 221 aa8.76□□□□□ -1.01
CCSER1-212ENST00000514352 PRR20DP86480 221 aa8.76□□□□□ -1.01
CCSER1-212ENST00000514352 PRR20BP86481 221 aa8.76□□□□□ -1.01
CCSER1-212ENST00000514352 PRR20AP86496 221 aa8.76□□□□□ -1.01
CCSER1-212ENST00000514352 ZNF598Q86UK7 904 aaKnown RBP8.76□□□□□ -1.01
CCSER1-212ENST00000514352 SWT1Q5T5J6 900 aaKnown RBP8.75□□□□□ -1.01
CCSER1-212ENST00000514352 SPRYD7Q5W111 196 aa8.75□□□□□ -1.01
CCSER1-212ENST00000514352 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
CCSER1-212ENST00000514352 TRIM67Q6ZTA4 783 aa8.74□□□□□ -1.01
CCSER1-212ENST00000514352 PCDHB3Q9Y5E6 796 aa8.74□□□□□ -1.01
CCSER1-212ENST00000514352 ANKLE1Q8NAG6 615 aa8.73□□□□□ -1.01
CCSER1-212ENST00000514352 ARIH1Q9Y4X5 557 aaPredicted RBP8.73□□□□□ -1.01
CCSER1-212ENST00000514352 E2F4Q16254 413 aa8.72□□□□□ -1.01
CCSER1-212ENST00000514352 TTC13Q8NBP0 860 aa8.71□□□□□ -1.02
CCSER1-212ENST00000514352 OSBPP22059 807 aa8.7□□□□□ -1.02
CCSER1-212ENST00000514352 TREML4Q6UXN2 200 aa8.7□□□□□ -1.02
CCSER1-212ENST00000514352 PRIM1P49642 420 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms