RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 ONECUT3O60422 494 aaPredicted RBP8□□□□□ -1.13
CALCOCO2-223ENST00000514267 NBR1Q14596 966 aa8□□□□□ -1.13
CALCOCO2-223ENST00000514267 NBPF3Q9H094 633 aa8□□□□□ -1.13
CALCOCO2-223ENST00000514267 AXIN2Q9Y2T1 843 aa8□□□□□ -1.13
CALCOCO2-223ENST00000514267 EN1Q05925 392 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-223ENST00000514267 KCNV2Q8TDN2 545 aa7.99□□□□□ -1.13
CALCOCO2-223ENST00000514267 RNF166Q96A37 237 aaPredicted RBP7.99□□□□□ -1.13
CALCOCO2-223ENST00000514267 ADAM33Q9BZ11 813 aa7.99□□□□□ -1.13
CALCOCO2-223ENST00000514267 PSEN2P49810 448 aa7.98□□□□□ -1.13
CALCOCO2-223ENST00000514267 POTEEQ6S8J3 1075 aa7.98□□□□□ -1.13
CALCOCO2-223ENST00000514267 DDX12PQ92771 950 aa7.98□□□□□ -1.13
CALCOCO2-223ENST00000514267 MAP3K7O43318 606 aa7.97□□□□□ -1.13
CALCOCO2-223ENST00000514267 SMYD5Q6GMV2 418 aa7.97□□□□□ -1.13
CALCOCO2-223ENST00000514267 C6orf132Q5T0Z8 1188 aa7.96□□□□□ -1.14
CALCOCO2-223ENST00000514267 ZBED2Q9BTP6 218 aa7.96□□□□□ -1.14
CALCOCO2-223ENST00000514267 VPS9D1Q9Y2B5 631 aa7.96□□□□□ -1.14
CALCOCO2-223ENST00000514267 DMRTA1Q5VZB9 504 aa7.95□□□□□ -1.14
CALCOCO2-223ENST00000514267 HRO43593 1189 aa7.94□□□□□ -1.14
CALCOCO2-223ENST00000514267 RBM27Q9P2N5 1060 aaKnown RBP7.94□□□□□ -1.14
CALCOCO2-223ENST00000514267 RABGEF1Q9UJ41 708 aa7.94□□□□□ -1.14
CALCOCO2-223ENST00000514267 GRXCR2A6NFK2 248 aa7.93□□□□□ -1.14
CALCOCO2-223ENST00000514267 LAPTM4BQ86VI4 370 aa7.93□□□□□ -1.14
CALCOCO2-223ENST00000514267 GOLGA8CPA6NN73 597 aa7.92□□□□□ -1.14
CALCOCO2-223ENST00000514267 TULP1O00294 542 aaPredicted RBP7.92□□□□□ -1.14
CALCOCO2-223ENST00000514267 MRPL50Q8N5N7 158 aaKnown RBP7.92□□□□□ -1.14
CALCOCO2-223ENST00000514267 RBM33Q96EV2 1170 aaKnown RBP7.92□□□□□ -1.14
CALCOCO2-223ENST00000514267 PACS2Q86VP3 889 aa7.91□□□□□ -1.14
CALCOCO2-223ENST00000514267 OSBPP22059 807 aa7.9□□□□□ -1.14
CALCOCO2-223ENST00000514267 HCSTQ9UBK5 93 aa7.9□□□□□ -1.14
CALCOCO2-223ENST00000514267 TRIM6-TRIM34B2RNG4 842 aa7.89□□□□□ -1.15
CALCOCO2-223ENST00000514267 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
CALCOCO2-223ENST00000514267 COL9A1P20849 921 aa7.88□□□□□ -1.15
CALCOCO2-223ENST00000514267 NBPF26B4DH59 902 aa7.87□□□□□ -1.15
CALCOCO2-223ENST00000514267 PRSS12P56730 875 aa7.86□□□□□ -1.15
CALCOCO2-223ENST00000514267 ANKK1Q8NFD2 765 aa7.86□□□□□ -1.15
CALCOCO2-223ENST00000514267 FAM98CQ17RN3 349 aaKnown RBP7.85□□□□□ -1.15
CALCOCO2-223ENST00000514267 TSR1Q2NL82 804 aaKnown RBP7.85□□□□□ -1.15
CALCOCO2-223ENST00000514267 NECTIN2Q92692 538 aa7.85□□□□□ -1.15
CALCOCO2-223ENST00000514267 TESPA1A2RU30 521 aaPredicted RBP7.84□□□□□ -1.15
CALCOCO2-223ENST00000514267 PROX2Q3B8N5 592 aa7.84□□□□□ -1.15
CALCOCO2-223ENST00000514267 NYAP1Q6ZVC0 841 aa7.84□□□□□ -1.15
CALCOCO2-223ENST00000514267 CDCA7LQ96GN5 454 aa7.84□□□□□ -1.15
CALCOCO2-223ENST00000514267 KIAA1468Q9P260 1216 aa7.84□□□□□ -1.15
CALCOCO2-223ENST00000514267 KDM2AQ9Y2K7 1162 aa7.84□□□□□ -1.15
CALCOCO2-223ENST00000514267 SLC4A3P48751 1232 aa7.83□□□□□ -1.16
CALCOCO2-223ENST00000514267 WNT2BQ93097 391 aa7.83□□□□□ -1.16
CALCOCO2-223ENST00000514267 SEMA3EO15041 775 aa7.82□□□□□ -1.16
CALCOCO2-223ENST00000514267 FCHSD2O94868 740 aa7.82□□□□□ -1.16
CALCOCO2-223ENST00000514267 MLLT3P42568 568 aaPredicted RBP7.82□□□□□ -1.16
CALCOCO2-223ENST00000514267 HDGFP51858 240 aaKnown RBP7.82□□□□□ -1.16
CALCOCO2-223ENST00000514267 KCTD12Q96CX2 325 aaKnown RBP7.82□□□□□ -1.16
CALCOCO2-223ENST00000514267 THSD4Q6ZMP0 1018 aa7.8□□□□□ -1.16
CALCOCO2-223ENST00000514267 NUTM2FA1L443 756 aa7.79□□□□□ -1.16
CALCOCO2-223ENST00000514267 ZFRQ96KR1 1074 aaKnown RBP7.79□□□□□ -1.16
CALCOCO2-223ENST00000514267 PTGDRQ13258 359 aa7.78□□□□□ -1.16
CALCOCO2-223ENST00000514267 HIC1Q14526 733 aa7.78□□□□□ -1.16
CALCOCO2-223ENST00000514267 TTC13Q8NBP0 860 aa7.78□□□□□ -1.16
CALCOCO2-223ENST00000514267 LRCH3Q96II8 777 aa7.78□□□□□ -1.16
CALCOCO2-223ENST00000514267 TSKSQ9UJT2 592 aa7.78□□□□□ -1.16
CALCOCO2-223ENST00000514267 SOWAHBA6NEL2 793 aa7.77□□□□□ -1.17
CALCOCO2-223ENST00000514267 PRIM1P49642 420 aaKnown RBP7.77□□□□□ -1.17
CALCOCO2-223ENST00000514267 CDHR5Q9HBB8 845 aa7.77□□□□□ -1.17
CALCOCO2-223ENST00000514267 RBM46Q8TBY0 533 aaKnown RBP7.76□□□□□ -1.17
CALCOCO2-223ENST00000514267 TATDN2Q93075 761 aa7.76□□□□□ -1.17
CALCOCO2-223ENST00000514267 NPDC1Q9NQX5 325 aaPredicted RBP7.76□□□□□ -1.17
CALCOCO2-223ENST00000514267 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.76□□□□□ -1.17
CALCOCO2-223ENST00000514267 PNMA3Q9UL41 463 aa7.76□□□□□ -1.17
CALCOCO2-223ENST00000514267 SEPT9Q9UHD8 586 aaPredicted RBP7.75□□□□□ -1.17
CALCOCO2-223ENST00000514267 PADI6Q6TGC4 694 aa7.74□□□□□ -1.17
CALCOCO2-223ENST00000514267 TSR3Q9UJK0 312 aaKnown RBP7.74□□□□□ -1.17
CALCOCO2-223ENST00000514267 OATP04181 439 aa7.73□□□□□ -1.17
CALCOCO2-223ENST00000514267 NUDT18Q6ZVK8 323 aa7.73□□□□□ -1.17
CALCOCO2-223ENST00000514267 GPIHBP1Q8IV16 184 aa7.73□□□□□ -1.17
CALCOCO2-223ENST00000514267 SLF2Q8IX21 1173 aa7.73□□□□□ -1.17
CALCOCO2-223ENST00000514267 PTPN5P54829 565 aa7.72□□□□□ -1.17
CALCOCO2-223ENST00000514267 PRR14Q9BWN1 585 aa7.72□□□□□ -1.17
CALCOCO2-223ENST00000514267 GNPATO15228 680 aa7.71□□□□□ -1.18
CALCOCO2-223ENST00000514267 DNAJB2P25686 324 aa7.71□□□□□ -1.18
CALCOCO2-223ENST00000514267 IFFO2Q5TF58 517 aa7.7□□□□□ -1.18
CALCOCO2-223ENST00000514267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.69□□□□□ -1.18
CALCOCO2-223ENST00000514267 PPP4CP60510 307 aa7.69□□□□□ -1.18
CALCOCO2-223ENST00000514267 RBM26Q5T8P6 1007 aaKnown RBP7.69□□□□□ -1.18
CALCOCO2-223ENST00000514267 RSPH4AQ5TD94 716 aa7.69□□□□□ -1.18
CALCOCO2-223ENST00000514267 PLA2G2EQ9NZK7 142 aa7.69□□□□□ -1.18
CALCOCO2-223ENST00000514267 FAM198AQ9UFP1 575 aa7.69□□□□□ -1.18
CALCOCO2-223ENST00000514267 EYA1Q99502 592 aa7.68□□□□□ -1.18
CALCOCO2-223ENST00000514267 HPS5Q9UPZ3 1129 aa7.68□□□□□ -1.18
CALCOCO2-223ENST00000514267 ADGRG1Q9Y653 693 aa7.68□□□□□ -1.18
CALCOCO2-223ENST00000514267 BCAMP50895 628 aa7.67□□□□□ -1.18
CALCOCO2-223ENST00000514267 SAMD7Q7Z3H4 446 aa7.67□□□□□ -1.18
CALCOCO2-223ENST00000514267 BCANQ96GW7 911 aa7.66□□□□□ -1.18
CALCOCO2-223ENST00000514267 SMAPO00193 183 aa7.65□□□□□ -1.18
CALCOCO2-223ENST00000514267 TMEM134Q9H6X4 195 aa7.65□□□□□ -1.18
CALCOCO2-223ENST00000514267 ITGBL1O95965 494 aaPredicted RBP7.64□□□□□ -1.19
CALCOCO2-223ENST00000514267 RNF40O75150 1001 aa7.63□□□□□ -1.19
CALCOCO2-223ENST00000514267 RGS20O76081 388 aa7.63□□□□□ -1.19
CALCOCO2-223ENST00000514267 MAP2K5Q13163 448 aa7.63□□□□□ -1.19
CALCOCO2-223ENST00000514267 PXYLP1Q8TE99 480 aa7.63□□□□□ -1.19
CALCOCO2-223ENST00000514267 WBP1LQ9NX94 342 aa7.63□□□□□ -1.19
CALCOCO2-223ENST00000514267 GPR37O15354 613 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms