RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 E9PCH4 1651 aa21.18■□□□□ 0.98
VCAN-211ENST00000513984 VWDEQ8N2E2 1590 aa21.18■□□□□ 0.98
VCAN-211ENST00000513984 PLA2R1Q13018 1463 aa21.18■□□□□ 0.98
VCAN-211ENST00000513984 TET3O43151 1660 aa21.18■□□□□ 0.98
VCAN-211ENST00000513984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.98
VCAN-211ENST00000513984 HIRIP3Q9BW71 556 aaPredicted RBP21.18■□□□□ 0.98
VCAN-211ENST00000513984 UHRF1BP1Q6BDS2 1440 aa21.17■□□□□ 0.98
VCAN-211ENST00000513984 HECW2Q9P2P5 1572 aa21.17■□□□□ 0.98
VCAN-211ENST00000513984 PRDM15P57071 1507 aaPredicted RBP21.16■□□□□ 0.98
VCAN-211ENST00000513984 CYB5RLQ6IPT4 315 aa21.16■□□□□ 0.98
VCAN-211ENST00000513984 POLR1AO95602 1720 aaPredicted RBP21.16■□□□□ 0.98
VCAN-211ENST00000513984 MROH1Q8NDA8 1641 aa21.15■□□□□ 0.98
VCAN-211ENST00000513984 CCDC144AA2RUR9 1427 aa21.15■□□□□ 0.98
VCAN-211ENST00000513984 DHX29Q7Z478 1369 aaKnown RBP21.15■□□□□ 0.98
VCAN-211ENST00000513984 MLH3Q9UHC1 1453 aa21.14■□□□□ 0.98
VCAN-211ENST00000513984 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.97
VCAN-211ENST00000513984 HSPA5P11021 654 aaKnown RBP21.13■□□□□ 0.97
VCAN-211ENST00000513984 SPHKAPQ2M3C7 1700 aa21.13■□□□□ 0.97
VCAN-211ENST00000513984 RNF17Q9BXT8 1623 aaKnown RBP21.12■□□□□ 0.97
VCAN-211ENST00000513984 BCORL1Q5H9F3 1711 aa21.12■□□□□ 0.97
VCAN-211ENST00000513984 RICTORQ6R327 1708 aa21.11■□□□□ 0.97
VCAN-211ENST00000513984 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
VCAN-211ENST00000513984 DIP2BQ9P265 1576 aa21.11■□□□□ 0.97
VCAN-211ENST00000513984 RALGAPBQ86X10 1494 aa21.11■□□□□ 0.97
VCAN-211ENST00000513984 SPATA31E1Q6ZUB1 1445 aa21.1■□□□□ 0.97
VCAN-211ENST00000513984 ABCA6Q8N139 1617 aa21.09■□□□□ 0.97
VCAN-211ENST00000513984 A2MP01023 1474 aa21.08■□□□□ 0.97
VCAN-211ENST00000513984 TRPM2O94759 1503 aa21.08■□□□□ 0.97
VCAN-211ENST00000513984 FRMPD1Q5SYB0 1578 aa21.08■□□□□ 0.96
VCAN-211ENST00000513984 CEP152O94986 1710 aa21.07■□□□□ 0.96
VCAN-211ENST00000513984 MYT1LQ9UL68 1186 aa21.07■□□□□ 0.96
VCAN-211ENST00000513984 KANK1Q14678 1352 aa21.07■□□□□ 0.96
VCAN-211ENST00000513984 TRPM1Q7Z4N2 1603 aa21.04■□□□□ 0.96
VCAN-211ENST00000513984 KIF3BO15066 747 aa21.04■□□□□ 0.96
VCAN-211ENST00000513984 PTPRTO14522 1441 aa21.04■□□□□ 0.96
VCAN-211ENST00000513984 LMTK2Q8IWU2 1503 aa21.03■□□□□ 0.96
VCAN-211ENST00000513984 PPRC1Q5VV67 1664 aaKnown RBP21.03■□□□□ 0.96
VCAN-211ENST00000513984 CENPBP07199 599 aaPredicted RBP21.02■□□□□ 0.96
VCAN-211ENST00000513984 EFCAB6Q5THR3 1501 aa21.02■□□□□ 0.96
VCAN-211ENST00000513984 DIP2CQ9Y2E4 1556 aa21.02■□□□□ 0.95
VCAN-211ENST00000513984 WASHC2AQ641Q2 1341 aa21.02■□□□□ 0.95
VCAN-211ENST00000513984 CLTCL1P53675 1640 aa21.01■□□□□ 0.95
VCAN-211ENST00000513984 DCAF11Q8TEB1 546 aa21■□□□□ 0.95
VCAN-211ENST00000513984 PRAG1Q86YV5 1406 aa21■□□□□ 0.95
VCAN-211ENST00000513984 ZNF326Q5BKZ1 582 aaKnown RBP20.99■□□□□ 0.95
VCAN-211ENST00000513984 TSPOAP1O95153 1857 aa20.98■□□□□ 0.95
VCAN-211ENST00000513984 USP47Q96K76 1375 aa20.98■□□□□ 0.95
VCAN-211ENST00000513984 NEURL4Q96JN8 1562 aa20.98■□□□□ 0.95
VCAN-211ENST00000513984 LAMC1P11047 1609 aa20.98■□□□□ 0.95
VCAN-211ENST00000513984 CCDC7Q96M83 1385 aa20.96■□□□□ 0.95
VCAN-211ENST00000513984 ZMYM4Q5VZL5 1548 aa20.96■□□□□ 0.95
VCAN-211ENST00000513984 KIF13AQ9H1H9 1805 aa20.95■□□□□ 0.94
VCAN-211ENST00000513984 KDM2AQ9Y2K7 1162 aa20.95■□□□□ 0.94
VCAN-211ENST00000513984 RAPGEF3O95398 923 aa20.94■□□□□ 0.94
VCAN-211ENST00000513984 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
VCAN-211ENST00000513984 KIF1BO60333 1816 aa20.93■□□□□ 0.94
VCAN-211ENST00000513984 FAM69CQ0P6D2 419 aa20.93■□□□□ 0.94
VCAN-211ENST00000513984 CNTLNQ9NXG0 1405 aa20.92■□□□□ 0.94
VCAN-211ENST00000513984 C11orf95C9JLR9 678 aaPredicted RBP20.92■□□□□ 0.94
VCAN-211ENST00000513984 RGL3Q3MIN7 710 aa20.92■□□□□ 0.94
VCAN-211ENST00000513984 MADDQ8WXG6 1647 aa20.91■□□□□ 0.94
VCAN-211ENST00000513984 GPRASP1Q5JY77 1395 aa20.91■□□□□ 0.94
VCAN-211ENST00000513984 ZC3H13Q5T200 1668 aaKnown RBP20.9■□□□□ 0.94
VCAN-211ENST00000513984 ANP32CO43423 234 aa20.9■□□□□ 0.94
VCAN-211ENST00000513984 CARD11Q9BXL7 1154 aa20.9■□□□□ 0.94
VCAN-211ENST00000513984 ABCC3O15438 1527 aa20.89■□□□□ 0.94
VCAN-211ENST00000513984 ROCK2O75116 1388 aaKnown RBP20.89■□□□□ 0.94
VCAN-211ENST00000513984 CAMSAP1Q5T5Y3 1602 aa20.89■□□□□ 0.93
VCAN-211ENST00000513984 KIF7Q2M1P5 1343 aa20.88■□□□□ 0.93
VCAN-211ENST00000513984 IFT172Q9UG01 1749 aa20.87■□□□□ 0.93
VCAN-211ENST00000513984 YEATS2Q9ULM3 1422 aa20.87■□□□□ 0.93
VCAN-211ENST00000513984 CCER2I3L3R5 266 aa20.86■□□□□ 0.93
VCAN-211ENST00000513984 CFAP65Q6ZU64 1925 aaKnown RBP20.86■□□□□ 0.93
VCAN-211ENST00000513984 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
VCAN-211ENST00000513984 ARID4BQ4LE39 1312 aaPredicted RBP20.85■□□□□ 0.93
VCAN-211ENST00000513984 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
VCAN-211ENST00000513984 MROH2AA6NES4 1674 aa20.85■□□□□ 0.93
VCAN-211ENST00000513984 NPATQ14207 1427 aa20.84■□□□□ 0.93
VCAN-211ENST00000513984 STAC3Q96MF2 364 aa20.84■□□□□ 0.93
VCAN-211ENST00000513984 KIAA1210Q9ULL0 1709 aa20.83■□□□□ 0.93
VCAN-211ENST00000513984 REREQ9P2R6 1566 aa20.83■□□□□ 0.93
VCAN-211ENST00000513984 SIGLEC1Q9BZZ2 1709 aa20.82■□□□□ 0.92
VCAN-211ENST00000513984 GGT6Q6P531 493 aa20.81■□□□□ 0.92
VCAN-211ENST00000513984 ADGRB3O60242 1522 aa20.8■□□□□ 0.92
VCAN-211ENST00000513984 IQGAP1P46940 1657 aa20.8■□□□□ 0.92
VCAN-211ENST00000513984 MYOM2P54296 1465 aa20.79■□□□□ 0.92
VCAN-211ENST00000513984 NBPF1Q3BBV0 1214 aa20.78■□□□□ 0.92
VCAN-211ENST00000513984 PIK3C2BO00750 1634 aa20.78■□□□□ 0.92
VCAN-211ENST00000513984 ARHGAP31Q2M1Z3 1444 aa20.77■□□□□ 0.92
VCAN-211ENST00000513984 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
VCAN-211ENST00000513984 WASHC2CQ9Y4E1 1318 aa20.77■□□□□ 0.91
VCAN-211ENST00000513984 NOS1P29475 1434 aa20.75■□□□□ 0.91
VCAN-211ENST00000513984 PPLO60437 1756 aa20.75■□□□□ 0.91
VCAN-211ENST00000513984 AGLP35573 1532 aa20.75■□□□□ 0.91
VCAN-211ENST00000513984 SYNMO15061 1565 aa20.74■□□□□ 0.91
VCAN-211ENST00000513984 SCAF1Q9H7N4 1312 aaKnown RBP20.73■□□□□ 0.91
VCAN-211ENST00000513984 ARHGEF40Q8TER5 1519 aa20.72■□□□□ 0.91
VCAN-211ENST00000513984 NRXN1Q9ULB1 1477 aa20.71■□□□□ 0.91
VCAN-211ENST00000513984 PREX1Q8TCU6 1659 aa20.71■□□□□ 0.91
VCAN-211ENST00000513984 COL17A1Q9UMD9 1497 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms