RNA–Protein interactions for RNA: ENST00000513436.6

SERF1A-209, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 3 BASIC

Gene SERF1A, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-209ENST00000513436 NCOA1Q15788 1441 aa18.88■□□□□ 0.61
SERF1A-209ENST00000513436 RRP7BPQ9NSQ0 103 aa18.88■□□□□ 0.61
SERF1A-209ENST00000513436 CAMSAP1Q5T5Y3 1602 aa18.87■□□□□ 0.61
SERF1A-209ENST00000513436 PKD2Q13563 968 aa18.87■□□□□ 0.61
SERF1A-209ENST00000513436 KDM5DQ9BY66 1539 aa18.87■□□□□ 0.61
SERF1A-209ENST00000513436 TNRQ92752 1358 aa18.86■□□□□ 0.61
SERF1A-209ENST00000513436 MAST1Q9Y2H9 1570 aa18.86■□□□□ 0.61
SERF1A-209ENST00000513436 PHF23Q9BUL5 403 aaPredicted RBP18.85■□□□□ 0.61
SERF1A-209ENST00000513436 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
SERF1A-209ENST00000513436 FAM135AQ9P2D6 1515 aa18.84■□□□□ 0.61
SERF1A-209ENST00000513436 FAM50AQ14320 339 aaKnown RBP18.84■□□□□ 0.61
SERF1A-209ENST00000513436 FGD6Q6ZV73 1430 aa18.84■□□□□ 0.61
SERF1A-209ENST00000513436 KIF15Q9NS87 1388 aa18.83■□□□□ 0.61
SERF1A-209ENST00000513436 ABCC5O15440 1437 aa18.83■□□□□ 0.61
SERF1A-209ENST00000513436 PTPN23Q9H3S7 1636 aa18.83■□□□□ 0.61
SERF1A-209ENST00000513436 CEP170BQ9Y4F5 1589 aaPredicted RBP18.83■□□□□ 0.6
SERF1A-209ENST00000513436 PZPP20742 1482 aa18.82■□□□□ 0.6
SERF1A-209ENST00000513436 MYO3AQ8NEV4 1616 aa18.82■□□□□ 0.6
SERF1A-209ENST00000513436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.6
SERF1A-209ENST00000513436 DUOX2Q9NRD8 1548 aa18.81■□□□□ 0.6
SERF1A-209ENST00000513436 A2ML1A8K2U0 1454 aa18.81■□□□□ 0.6
SERF1A-209ENST00000513436 THEMISQ8N1K5 641 aaPredicted RBP18.81■□□□□ 0.6
SERF1A-209ENST00000513436 DAPK1P53355 1430 aa18.8■□□□□ 0.6
SERF1A-209ENST00000513436 PLA2R1Q13018 1463 aa18.79■□□□□ 0.6
SERF1A-209ENST00000513436 ANKRD30AQ9BXX3 1397 aa18.79■□□□□ 0.6
SERF1A-209ENST00000513436 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
SERF1A-209ENST00000513436 TCOF1Q13428 1488 aaKnown RBP18.77■□□□□ 0.6
SERF1A-209ENST00000513436 ANKLE2Q86XL3 938 aa18.77■□□□□ 0.6
SERF1A-209ENST00000513436 ZNF142P52746 1687 aaPredicted RBP18.77■□□□□ 0.59
SERF1A-209ENST00000513436 KANK1Q14678 1352 aa18.76■□□□□ 0.59
SERF1A-209ENST00000513436 EIF2AK4Q9P2K8 1649 aaKnown RBP18.76■□□□□ 0.59
SERF1A-209ENST00000513436 ERBINQ96RT1 1412 aa18.76■□□□□ 0.59
SERF1A-209ENST00000513436 ABCC3O15438 1527 aa18.75■□□□□ 0.59
SERF1A-209ENST00000513436 RNF17Q9BXT8 1623 aaKnown RBP18.75■□□□□ 0.59
SERF1A-209ENST00000513436 NLRP1Q9C000 1473 aa18.74■□□□□ 0.59
SERF1A-209ENST00000513436 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
SERF1A-209ENST00000513436 DNMT1P26358 1616 aaKnown RBP18.74■□□□□ 0.59
SERF1A-209ENST00000513436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.59
SERF1A-209ENST00000513436 ZC3H13Q5T200 1668 aaKnown RBP18.71■□□□□ 0.59
SERF1A-209ENST00000513436 UGGT1Q9NYU2 1555 aa18.71■□□□□ 0.59
SERF1A-209ENST00000513436 CROCC2H7BZ55 1655 aa18.7■□□□□ 0.58
SERF1A-209ENST00000513436 PPARGC1BQ86YN6 1023 aaKnown RBP18.69■□□□□ 0.58
SERF1A-209ENST00000513436 LTBP4Q8N2S1 1624 aa18.68■□□□□ 0.58
SERF1A-209ENST00000513436 ERVK-7P63135 1459 aa18.68■□□□□ 0.58
SERF1A-209ENST00000513436 STAG3Q9UJ98 1225 aa18.68■□□□□ 0.58
SERF1A-209ENST00000513436 MROH1Q8NDA8 1641 aa18.67■□□□□ 0.58
SERF1A-209ENST00000513436 SPATA31D1Q6ZQQ2 1576 aa18.66■□□□□ 0.58
SERF1A-209ENST00000513436 ARHGAP31Q2M1Z3 1444 aa18.65■□□□□ 0.58
SERF1A-209ENST00000513436 CEP152O94986 1710 aa18.65■□□□□ 0.58
SERF1A-209ENST00000513436 UBAP1LF5GYI3 381 aa18.64■□□□□ 0.57
SERF1A-209ENST00000513436 ITGAEP38570 1179 aa18.64■□□□□ 0.57
SERF1A-209ENST00000513436 PRDM15P57071 1507 aaPredicted RBP18.64■□□□□ 0.57
SERF1A-209ENST00000513436 IQSEC2Q5JU85 1478 aa18.63■□□□□ 0.57
SERF1A-209ENST00000513436 ADGRL2O95490 1459 aa18.62■□□□□ 0.57
SERF1A-209ENST00000513436 NPHP4O75161 1426 aaPredicted RBP18.62■□□□□ 0.57
SERF1A-209ENST00000513436 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
SERF1A-209ENST00000513436 CFAP65Q6ZU64 1925 aaKnown RBP18.62■□□□□ 0.57
SERF1A-209ENST00000513436 EID1Q9Y6B2 187 aa18.62■□□□□ 0.57
SERF1A-209ENST00000513436 TXNDC2Q86VQ3 553 aa18.61■□□□□ 0.57
SERF1A-209ENST00000513436 POLR1AO95602 1720 aaPredicted RBP18.58■□□□□ 0.57
SERF1A-209ENST00000513436 DEPDC5O75140 1603 aa18.57■□□□□ 0.56
SERF1A-209ENST00000513436 NEURL4Q96JN8 1562 aa18.57■□□□□ 0.56
SERF1A-209ENST00000513436 MED14O60244 1454 aa18.57■□□□□ 0.56
SERF1A-209ENST00000513436 IDI1Q13907 227 aa18.57■□□□□ 0.56
SERF1A-209ENST00000513436 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
SERF1A-209ENST00000513436 LMTK2Q8IWU2 1503 aa18.55■□□□□ 0.56
SERF1A-209ENST00000513436 TOM1O60784 492 aa18.55■□□□□ 0.56
SERF1A-209ENST00000513436 LTKP29376 864 aa18.54■□□□□ 0.56
SERF1A-209ENST00000513436 SLC52A1Q9NWF4 448 aa18.54■□□□□ 0.56
SERF1A-209ENST00000513436 ROCK1Q13464 1354 aa18.54■□□□□ 0.56
SERF1A-209ENST00000513436 CPS1P31327 1500 aa18.53■□□□□ 0.56
SERF1A-209ENST00000513436 SCAF11Q99590 1463 aaKnown RBP18.53■□□□□ 0.56
SERF1A-209ENST00000513436 PIP4K2BP78356 416 aa18.52■□□□□ 0.56
SERF1A-209ENST00000513436 VWDEQ8N2E2 1590 aa18.52■□□□□ 0.55
SERF1A-209ENST00000513436 BCANQ96GW7 911 aa18.51■□□□□ 0.55
SERF1A-209ENST00000513436 UBR1Q8IWV7 1749 aa18.51■□□□□ 0.55
SERF1A-209ENST00000513436 TMEM2Q9UHN6 1383 aa18.51■□□□□ 0.55
SERF1A-209ENST00000513436 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
SERF1A-209ENST00000513436 CHGAP10645 457 aaKnown RBP18.49■□□□□ 0.55
SERF1A-209ENST00000513436 EFCAB6Q5THR3 1501 aa18.49■□□□□ 0.55
SERF1A-209ENST00000513436 NOS1P29475 1434 aa18.48■□□□□ 0.55
SERF1A-209ENST00000513436 HDGFP51858 240 aaKnown RBP18.48■□□□□ 0.55
SERF1A-209ENST00000513436 SLIT1O75093 1534 aa18.48■□□□□ 0.55
SERF1A-209ENST00000513436 ARHGAP23Q9P227 1491 aa18.48■□□□□ 0.55
SERF1A-209ENST00000513436 PIK3C2BO00750 1634 aa18.47■□□□□ 0.55
SERF1A-209ENST00000513436 NUP155O75694 1391 aa18.47■□□□□ 0.55
SERF1A-209ENST00000513436 RPRD2Q5VT52 1461 aaKnown RBP18.47■□□□□ 0.55
SERF1A-209ENST00000513436 DISP3Q9P2K9 1392 aa18.46■□□□□ 0.55
SERF1A-209ENST00000513436 PPP1R15AO75807 674 aaPredicted RBP18.44■□□□□ 0.54
SERF1A-209ENST00000513436 SYNMO15061 1565 aa18.43■□□□□ 0.54
SERF1A-209ENST00000513436 SLC26A8Q96RN1 970 aa18.43■□□□□ 0.54
SERF1A-209ENST00000513436 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
SERF1A-209ENST00000513436 TET3O43151 1660 aa18.41■□□□□ 0.54
SERF1A-209ENST00000513436 UNC13BO14795 1591 aa18.39■□□□□ 0.54
SERF1A-209ENST00000513436 ADGRB3O60242 1522 aa18.39■□□□□ 0.53
SERF1A-209ENST00000513436 LRRC7Q96NW7 1537 aa18.39■□□□□ 0.53
SERF1A-209ENST00000513436 HSPA1LP34931 641 aa18.39■□□□□ 0.53
SERF1A-209ENST00000513436 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.39■□□□□ 0.53
SERF1A-209ENST00000513436 KDM5AP29375 1690 aaKnown RBP18.38■□□□□ 0.53
SERF1A-209ENST00000513436 KCNA6P17658 529 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms