RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 E2F4Q16254 413 aa12.13□□□□□ -0.47
SNX25-206ENST00000513433 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
SNX25-206ENST00000513433 ONECUT3O60422 494 aaPredicted RBP12.1□□□□□ -0.47
SNX25-206ENST00000513433 COL9A1P20849 921 aa12.1□□□□□ -0.47
SNX25-206ENST00000513433 C6orf132Q5T0Z8 1188 aa12.09□□□□□ -0.47
SNX25-206ENST00000513433 RABGEF1Q9UJ41 708 aa12.09□□□□□ -0.47
SNX25-206ENST00000513433 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
SNX25-206ENST00000513433 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
SNX25-206ENST00000513433 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
SNX25-206ENST00000513433 WDR70Q9NW82 654 aa12.05□□□□□ -0.48
SNX25-206ENST00000513433 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
SNX25-206ENST00000513433 THSD4Q6ZMP0 1018 aa12.03□□□□□ -0.48
SNX25-206ENST00000513433 DDX12PQ92771 950 aa12.03□□□□□ -0.48
SNX25-206ENST00000513433 PROX2Q3B8N5 592 aa12.02□□□□□ -0.49
SNX25-206ENST00000513433 LAPTM4BQ86VI4 370 aa12.02□□□□□ -0.49
SNX25-206ENST00000513433 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
SNX25-206ENST00000513433 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
SNX25-206ENST00000513433 WNT2BQ93097 391 aa11.98□□□□□ -0.49
SNX25-206ENST00000513433 NBR1Q14596 966 aa11.97□□□□□ -0.49
SNX25-206ENST00000513433 KIAA1468Q9P260 1216 aa11.97□□□□□ -0.49
SNX25-206ENST00000513433 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
SNX25-206ENST00000513433 IFFO2Q5TF58 517 aa11.96□□□□□ -0.49
SNX25-206ENST00000513433 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.49
SNX25-206ENST00000513433 TSHZ2Q9NRE2 1034 aa11.96□□□□□ -0.49
SNX25-206ENST00000513433 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
SNX25-206ENST00000513433 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
SNX25-206ENST00000513433 OSBPP22059 807 aa11.93□□□□□ -0.5
SNX25-206ENST00000513433 MAP3K7O43318 606 aa11.92□□□□□ -0.5
SNX25-206ENST00000513433 PTPN5P54829 565 aa11.92□□□□□ -0.5
SNX25-206ENST00000513433 CERKQ8TCT0 537 aa11.92□□□□□ -0.5
SNX25-206ENST00000513433 ANKK1Q8NFD2 765 aa11.91□□□□□ -0.5
SNX25-206ENST00000513433 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
SNX25-206ENST00000513433 ZFRQ96KR1 1074 aaKnown RBP11.9□□□□□ -0.5
SNX25-206ENST00000513433 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
SNX25-206ENST00000513433 SOWAHBA6NEL2 793 aa11.89□□□□□ -0.51
SNX25-206ENST00000513433 FAM98CQ17RN3 349 aaKnown RBP11.89□□□□□ -0.51
SNX25-206ENST00000513433 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
SNX25-206ENST00000513433 PRSS12P56730 875 aa11.87□□□□□ -0.51
SNX25-206ENST00000513433 NYAP1Q6ZVC0 841 aa11.86□□□□□ -0.51
SNX25-206ENST00000513433 PACS2Q86VP3 889 aa11.86□□□□□ -0.51
SNX25-206ENST00000513433 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
SNX25-206ENST00000513433 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
SNX25-206ENST00000513433 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
SNX25-206ENST00000513433 FAM198AQ9UFP1 575 aa11.84□□□□□ -0.51
SNX25-206ENST00000513433 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
SNX25-206ENST00000513433 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
SNX25-206ENST00000513433 BCAMP50895 628 aa11.82□□□□□ -0.52
SNX25-206ENST00000513433 ITGBL1O95965 494 aaPredicted RBP11.81□□□□□ -0.52
SNX25-206ENST00000513433 NPDC1Q9NQX5 325 aaPredicted RBP11.81□□□□□ -0.52
SNX25-206ENST00000513433 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
SNX25-206ENST00000513433 RGS20O76081 388 aa11.77□□□□□ -0.53
SNX25-206ENST00000513433 PLCB2Q00722 1185 aa11.77□□□□□ -0.53
SNX25-206ENST00000513433 WBP1LQ9NX94 342 aa11.77□□□□□ -0.53
SNX25-206ENST00000513433 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.77□□□□□ -0.53
SNX25-206ENST00000513433 C3orf80F5H4A9 247 aa11.76□□□□□ -0.53
SNX25-206ENST00000513433 TATDN2Q93075 761 aa11.76□□□□□ -0.53
SNX25-206ENST00000513433 LRCH3Q96II8 777 aa11.76□□□□□ -0.53
SNX25-206ENST00000513433 TSR3Q9UJK0 312 aaKnown RBP11.76□□□□□ -0.53
SNX25-206ENST00000513433 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
SNX25-206ENST00000513433 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
SNX25-206ENST00000513433 MLLT3P42568 568 aaPredicted RBP11.74□□□□□ -0.53
SNX25-206ENST00000513433 A0A0G2JS52 829 aa11.73□□□□□ -0.53
SNX25-206ENST00000513433 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
SNX25-206ENST00000513433 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
SNX25-206ENST00000513433 SMAPO00193 183 aa11.7□□□□□ -0.54
SNX25-206ENST00000513433 PADI6Q6TGC4 694 aa11.68□□□□□ -0.54
SNX25-206ENST00000513433 NUDT18Q6ZVK8 323 aa11.68□□□□□ -0.54
SNX25-206ENST00000513433 SAMD7Q7Z3H4 446 aa11.68□□□□□ -0.54
SNX25-206ENST00000513433 PTGDRQ13258 359 aa11.67□□□□□ -0.54
SNX25-206ENST00000513433 EYA1Q99502 592 aa11.66□□□□□ -0.54
SNX25-206ENST00000513433 PPP4CP60510 307 aa11.65□□□□□ -0.54
SNX25-206ENST00000513433 KCNC4Q03721 635 aa11.63□□□□□ -0.55
SNX25-206ENST00000513433 SEMA3EO15041 775 aa11.61□□□□□ -0.55
SNX25-206ENST00000513433 TJAP1Q5JTD0 557 aa11.6□□□□□ -0.55
SNX25-206ENST00000513433 TESPA1A2RU30 521 aaPredicted RBP11.59□□□□□ -0.55
SNX25-206ENST00000513433 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
SNX25-206ENST00000513433 NECTIN2Q92692 538 aa11.59□□□□□ -0.55
SNX25-206ENST00000513433 SWT1Q5T5J6 900 aaKnown RBP11.56□□□□□ -0.56
SNX25-206ENST00000513433 SLF2Q8IX21 1173 aa11.56□□□□□ -0.56
SNX25-206ENST00000513433 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
SNX25-206ENST00000513433 FCHSD2O94868 740 aa11.54□□□□□ -0.56
SNX25-206ENST00000513433 APLP1P51693 650 aa11.53□□□□□ -0.56
SNX25-206ENST00000513433 NUTM2FA1L443 756 aa11.52□□□□□ -0.57
SNX25-206ENST00000513433 RBM46Q8TBY0 533 aaKnown RBP11.52□□□□□ -0.57
SNX25-206ENST00000513433 IL21Q9HBE4 155 aa11.52□□□□□ -0.57
SNX25-206ENST00000513433 DNAJB2P25686 324 aa11.51□□□□□ -0.57
SNX25-206ENST00000513433 MTRQ99707 1265 aa11.51□□□□□ -0.57
SNX25-206ENST00000513433 TMEM134Q9H6X4 195 aa11.51□□□□□ -0.57
SNX25-206ENST00000513433 KDM2AQ9Y2K7 1162 aa11.5□□□□□ -0.57
SNX25-206ENST00000513433 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
SNX25-206ENST00000513433 HIC1Q14526 733 aa11.48□□□□□ -0.57
SNX25-206ENST00000513433 GPR37O15354 613 aa11.47□□□□□ -0.57
SNX25-206ENST00000513433 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
SNX25-206ENST00000513433 RCCD1A6NED2 376 aa11.46□□□□□ -0.57
SNX25-206ENST00000513433 PRR14Q9BWN1 585 aa11.46□□□□□ -0.57
SNX25-206ENST00000513433 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
SNX25-206ENST00000513433 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
SNX25-206ENST00000513433 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.44□□□□□ -0.58
SNX25-206ENST00000513433 RNF40O75150 1001 aa11.44□□□□□ -0.58
SNX25-206ENST00000513433 OATP04181 439 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms