RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 PPP1R37O75864 691 aa8.56□□□□□ -1.04
HTT-211ENST00000513326 HSPA2P54652 639 aa8.56□□□□□ -1.04
HTT-211ENST00000513326 MKRN3Q13064 507 aaKnown RBP8.56□□□□□ -1.04
HTT-211ENST00000513326 NBR1Q14596 966 aa8.56□□□□□ -1.04
HTT-211ENST00000513326 KCNH8Q96L42 1107 aa8.56□□□□□ -1.04
HTT-211ENST00000513326 CFAP43Q8NDM7 1665 aa8.56□□□□□ -1.04
HTT-211ENST00000513326 CADPS2Q86UW7 1296 aa8.55□□□□□ -1.04
HTT-211ENST00000513326 TTLL13PA6NNM8 815 aa8.54□□□□□ -1.04
HTT-211ENST00000513326 WDR70Q9NW82 654 aa8.54□□□□□ -1.04
HTT-211ENST00000513326 ABCA8O94911 1581 aa8.53□□□□□ -1.04
HTT-211ENST00000513326 FRMPD1Q5SYB0 1578 aa8.53□□□□□ -1.04
HTT-211ENST00000513326 DISP3Q9P2K9 1392 aa8.53□□□□□ -1.04
HTT-211ENST00000513326 ARID3CA6NKF2 412 aa8.53□□□□□ -1.04
HTT-211ENST00000513326 GALR2O43603 387 aaPredicted RBP8.53□□□□□ -1.04
HTT-211ENST00000513326 BMP2KQ9NSY1 1161 aaPredicted RBP8.53□□□□□ -1.04
HTT-211ENST00000513326 BCORL1Q5H9F3 1711 aa8.53□□□□□ -1.04
HTT-211ENST00000513326 ARAP3Q8WWN8 1544 aa8.53□□□□□ -1.04
HTT-211ENST00000513326 SOCS7O14512 581 aa8.52□□□□□ -1.05
HTT-211ENST00000513326 RAPGEF3O95398 923 aa8.52□□□□□ -1.05
HTT-211ENST00000513326 EVX2Q03828 476 aa8.52□□□□□ -1.05
HTT-211ENST00000513326 P3H3Q8IVL6 736 aa8.52□□□□□ -1.05
HTT-211ENST00000513326 MS4A4AQ96JQ5 239 aa8.52□□□□□ -1.05
HTT-211ENST00000513326 RIMS1Q86UR5 1692 aaKnown RBP8.52□□□□□ -1.05
HTT-211ENST00000513326 SIGLEC1Q9BZZ2 1709 aa8.51□□□□□ -1.05
HTT-211ENST00000513326 CERKQ8TCT0 537 aa8.5□□□□□ -1.05
HTT-211ENST00000513326 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.48□□□□□ -1.055e-7■■■□□ 16.8
HTT-211ENST00000513326 TRIM35Q9UPQ4 493 aa8.48□□□□□ -1.05
HTT-211ENST00000513326 RAPGEF2Q9Y4G8 1499 aa8.47□□□□□ -1.05
HTT-211ENST00000513326 ARID4BQ4LE39 1312 aaPredicted RBP8.47□□□□□ -1.05
HTT-211ENST00000513326 SPATA31D1Q6ZQQ2 1576 aa8.47□□□□□ -1.05
HTT-211ENST00000513326 ARHGEF40Q8TER5 1519 aa8.46□□□□□ -1.05
HTT-211ENST00000513326 ABCA9Q8IUA7 1624 aa8.46□□□□□ -1.06
HTT-211ENST00000513326 ATP10BO94823 1461 aa8.45□□□□□ -1.06
HTT-211ENST00000513326 CTTNBP2Q8WZ74 1663 aa8.44□□□□□ -1.06
HTT-211ENST00000513326 PDE4AP27815 886 aa8.44□□□□□ -1.06
HTT-211ENST00000513326 ATN1P54259 1190 aaPredicted RBP8.43□□□□□ -1.06
HTT-211ENST00000513326 ASTLQ6HA08 431 aaPredicted RBP8.43□□□□□ -1.06
HTT-211ENST00000513326 KCNV2Q8TDN2 545 aa8.43□□□□□ -1.06
HTT-211ENST00000513326 NCKAP5LQ9HCH0 1330 aa8.43□□□□□ -1.06
HTT-211ENST00000513326 ATMINO43313 823 aaPredicted RBP8.42□□□□□ -1.06
HTT-211ENST00000513326 PRKCSHP14314 528 aaPredicted RBP8.42□□□□□ -1.06
HTT-211ENST00000513326 TPRNQ4KMQ1 711 aa8.42□□□□□ -1.06
HTT-211ENST00000513326 YEATS2Q9ULM3 1422 aa8.42□□□□□ -1.06
HTT-211ENST00000513326 NEO1Q92859 1461 aa8.42□□□□□ -1.06
HTT-211ENST00000513326 RICTORQ6R327 1708 aa8.41□□□□□ -1.06
HTT-211ENST00000513326 E2F4Q16254 413 aa8.41□□□□□ -1.06
HTT-211ENST00000513326 IER5LQ5T953 404 aa8.41□□□□□ -1.06
HTT-211ENST00000513326 LARP6Q9BRS8 491 aaKnown RBP8.41□□□□□ -1.06
HTT-211ENST00000513326 GABBR2O75899 941 aa8.4□□□□□ -1.06
HTT-211ENST00000513326 POTEHQ6S545 545 aa8.4□□□□□ -1.06
HTT-211ENST00000513326 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.06
HTT-211ENST00000513326 STRCQ7RTU9 1775 aa8.4□□□□□ -1.07
HTT-211ENST00000513326 GOLGA3Q08378 1498 aa8.39□□□□□ -1.07
HTT-211ENST00000513326 MLECQ14165 292 aa8.39□□□□□ -1.07
HTT-211ENST00000513326 MFSD10Q14728 455 aa8.39□□□□□ -1.07
HTT-211ENST00000513326 ARHGEF1Q92888 912 aaKnown RBP8.39□□□□□ -1.07
HTT-211ENST00000513326 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
HTT-211ENST00000513326 PHLDB1Q86UU1 1377 aa8.38□□□□□ -1.07
HTT-211ENST00000513326 IRX5P78411 483 aaPredicted RBP8.38□□□□□ -1.07
HTT-211ENST00000513326 PDCD7Q8N8D1 485 aaKnown RBP8.38□□□□□ -1.07
HTT-211ENST00000513326 DDX27Q96GQ7 796 aaKnown RBP8.38□□□□□ -1.07
HTT-211ENST00000513326 OCEL1Q9H607 264 aa8.38□□□□□ -1.07
HTT-211ENST00000513326 TTC37Q6PGP7 1564 aa8.38□□□□□ -1.07
HTT-211ENST00000513326 CEBPAP49715 358 aaPredicted RBP8.37□□□□□ -1.07
HTT-211ENST00000513326 DPY19L2Q6NUT2 758 aa8.37□□□□□ -1.07
HTT-211ENST00000513326 ZFYVE16Q7Z3T8 1539 aa8.37□□□□□ -1.07
HTT-211ENST00000513326 DENND4BO75064 1496 aaPredicted RBP8.37□□□□□ -1.07
HTT-211ENST00000513326 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
HTT-211ENST00000513326 ZMYM4Q5VZL5 1548 aa8.36□□□□□ -1.07
HTT-211ENST00000513326 FANCAO15360 1455 aa8.36□□□□□ -1.07
HTT-211ENST00000513326 NUP153P49790 1475 aaKnown RBP8.36□□□□□ -1.07
HTT-211ENST00000513326 ARHGEF12Q9NZN5 1544 aa8.35□□□□□ -1.07
HTT-211ENST00000513326 PREX1Q8TCU6 1659 aa8.35□□□□□ -1.07
HTT-211ENST00000513326 MICALL2Q8IY33 904 aa8.35□□□□□ -1.07
HTT-211ENST00000513326 DCBLD2Q96PD2 775 aa8.35□□□□□ -1.07
HTT-211ENST00000513326 HECW1Q76N89 1606 aa8.35□□□□□ -1.07
HTT-211ENST00000513326 LTBP4Q8N2S1 1624 aa8.35□□□□□ -1.07
HTT-211ENST00000513326 RAPGEF6Q8TEU7 1601 aa8.35□□□□□ -1.07
HTT-211ENST00000513326 AKNAQ7Z591 1439 aa8.35□□□□□ -1.07
HTT-211ENST00000513326 GPHNQ9NQX3 736 aaPredicted RBP8.34□□□□□ -1.07
HTT-211ENST00000513326 PRXQ9BXM0 1461 aa8.33□□□□□ -1.08
HTT-211ENST00000513326 PLCG2P16885 1265 aa8.33□□□□□ -1.08
HTT-211ENST00000513326 POGZQ7Z3K3 1410 aa8.33□□□□□ -1.08
HTT-211ENST00000513326 EFCAB5A4FU69 1503 aa8.33□□□□□ -1.08
HTT-211ENST00000513326 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.33□□□□□ -1.08
HTT-211ENST00000513326 SAMD9Q5K651 1589 aa8.32□□□□□ -1.08
HTT-211ENST00000513326 G3V3G9 751 aa8.32□□□□□ -1.08
HTT-211ENST00000513326 CAMK2BQ13554 666 aa8.32□□□□□ -1.08
HTT-211ENST00000513326 TMEM121BQ9BXQ6 578 aaPredicted RBP8.32□□□□□ -1.08
HTT-211ENST00000513326 BOLA1Q9Y3E2 137 aa8.32□□□□□ -1.08
HTT-211ENST00000513326 ARIH1Q9Y4X5 557 aaPredicted RBP8.31□□□□□ -1.08
HTT-211ENST00000513326 TULP1O00294 542 aaPredicted RBP8.3□□□□□ -1.08
HTT-211ENST00000513326 SEC24BO95487 1268 aa8.3□□□□□ -1.08
HTT-211ENST00000513326 PPP1R15BQ5SWA1 713 aa8.3□□□□□ -1.08
HTT-211ENST00000513326 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
HTT-211ENST00000513326 L3MBTL3Q96JM7 780 aaPredicted RBP8.3□□□□□ -1.08
HTT-211ENST00000513326 PELP1Q8IZL8 1130 aaKnown RBP8.29□□□□□ -1.08
HTT-211ENST00000513326 CFAP74Q9C0B2 1584 aa8.28□□□□□ -1.08
HTT-211ENST00000513326 SLC39A7Q92504 469 aa8.28□□□□□ -1.08
HTT-211ENST00000513326 PTPRTO14522 1441 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms