RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 RTL5Q5HYW3 569 aaPredicted RBP19.73■□□□□ 0.75
DDR1-271ENST00000513240 PPP4R2Q9NY27 417 aa19.73■□□□□ 0.75
DDR1-271ENST00000513240 ABCA8O94911 1581 aa19.71■□□□□ 0.75
DDR1-271ENST00000513240 MBD5Q9P267 1494 aa19.71■□□□□ 0.75
DDR1-271ENST00000513240 CDC42BPAQ5VT25 1732 aa19.71■□□□□ 0.75
DDR1-271ENST00000513240 PLEKHH2Q8IVE3 1493 aa19.7■□□□□ 0.74
DDR1-271ENST00000513240 ADGRL2O95490 1459 aa19.69■□□□□ 0.74
DDR1-271ENST00000513240 ARHGAP5Q13017 1502 aa19.69■□□□□ 0.74
DDR1-271ENST00000513240 CDCA7LQ96GN5 454 aa19.68■□□□□ 0.74
DDR1-271ENST00000513240 CCDC144AA2RUR9 1427 aa19.67■□□□□ 0.74
DDR1-271ENST00000513240 PANK3Q9H999 370 aa19.67■□□□□ 0.74
DDR1-271ENST00000513240 SYCP2Q9BX26 1530 aa19.67■□□□□ 0.74
DDR1-271ENST00000513240 EIF5BO60841 1220 aaKnown RBP19.67■□□□□ 0.74
DDR1-271ENST00000513240 ITSN2Q9NZM3 1697 aa19.66■□□□□ 0.74
DDR1-271ENST00000513240 PLIN1O60240 522 aa19.64■□□□□ 0.73
DDR1-271ENST00000513240 NUDCQ9Y266 331 aa19.64■□□□□ 0.73
DDR1-271ENST00000513240 SKAP1Q86WV1 359 aa19.64■□□□□ 0.73
DDR1-271ENST00000513240 SAMD9LQ8IVG5 1584 aa19.62■□□□□ 0.73
DDR1-271ENST00000513240 CCDC141Q6ZP82 1450 aa19.62■□□□□ 0.73
DDR1-271ENST00000513240 DISP3Q9P2K9 1392 aa19.62■□□□□ 0.73
DDR1-271ENST00000513240 PLA2R1Q13018 1463 aa19.6■□□□□ 0.73
DDR1-271ENST00000513240 ADGBQ8N7X0 1667 aa19.6■□□□□ 0.73
DDR1-271ENST00000513240 FAM135AQ9P2D6 1515 aa19.6■□□□□ 0.73
DDR1-271ENST00000513240 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
DDR1-271ENST00000513240 EFCAB2Q5VUJ9 269 aa19.59■□□□□ 0.73
DDR1-271ENST00000513240 ARHGEF12Q9NZN5 1544 aa19.59■□□□□ 0.73
DDR1-271ENST00000513240 KDM5CP41229 1560 aa19.59■□□□□ 0.73
DDR1-271ENST00000513240 TTC37Q6PGP7 1564 aa19.58■□□□□ 0.73
DDR1-271ENST00000513240 MYBBP1AQ9BQG0 1328 aaKnown RBP19.57■□□□□ 0.72
DDR1-271ENST00000513240 TRAPPC8Q9Y2L5 1435 aa19.57■□□□□ 0.72
DDR1-271ENST00000513240 KIF3BO15066 747 aa19.57■□□□□ 0.72
DDR1-271ENST00000513240 EXOC6Q8TAG9 804 aa19.57■□□□□ 0.72
DDR1-271ENST00000513240 CROCC2H7BZ55 1655 aa19.56■□□□□ 0.72
DDR1-271ENST00000513240 ADCY10Q96PN6 1610 aa19.56■□□□□ 0.72
DDR1-271ENST00000513240 RALGAPBQ86X10 1494 aa19.56■□□□□ 0.72
DDR1-271ENST00000513240 NUTM2DQ5VT03 806 aaPredicted RBP19.56■□□□□ 0.72
DDR1-271ENST00000513240 TESK2Q96S53 571 aa19.56■□□□□ 0.72
DDR1-271ENST00000513240 SPAG9O60271 1321 aaKnown RBP19.55■□□□□ 0.72
DDR1-271ENST00000513240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.55■□□□□ 0.72
DDR1-271ENST00000513240 PER1O15534 1290 aaPredicted RBP19.54■□□□□ 0.72
DDR1-271ENST00000513240 CDC42BPBQ9Y5S2 1711 aa19.54■□□□□ 0.72
DDR1-271ENST00000513240 UHRF1BP1Q6BDS2 1440 aa19.53■□□□□ 0.72
DDR1-271ENST00000513240 PRAG1Q86YV5 1406 aa19.53■□□□□ 0.72
DDR1-271ENST00000513240 RSPH4AQ5TD94 716 aa19.53■□□□□ 0.72
DDR1-271ENST00000513240 CHD1O14646 1710 aa19.52■□□□□ 0.72
DDR1-271ENST00000513240 A2MP01023 1474 aa19.52■□□□□ 0.71
DDR1-271ENST00000513240 NPM2Q86SE8 214 aaKnown RBP19.51■□□□□ 0.71
DDR1-271ENST00000513240 KTN1Q86UP2 1357 aaKnown RBP19.5■□□□□ 0.71
DDR1-271ENST00000513240 PKNOX2Q96KN3 472 aa19.5■□□□□ 0.71
DDR1-271ENST00000513240 SHANK2Q9UPX8 1470 aa19.5■□□□□ 0.71
DDR1-271ENST00000513240 RALBP1Q15311 655 aa19.5■□□□□ 0.71
DDR1-271ENST00000513240 ZBTB47Q9UFB7 747 aaPredicted RBP19.5■□□□□ 0.71
DDR1-271ENST00000513240 TNNT2P45379 298 aaPredicted RBP19.49■□□□□ 0.71
DDR1-271ENST00000513240 NLRP13Q86W25 1043 aa19.49■□□□□ 0.71
DDR1-271ENST00000513240 CCDC146Q8IYE0 955 aa19.49■□□□□ 0.71
DDR1-271ENST00000513240 ANP32AP39687 249 aaKnown RBP19.49■□□□□ 0.71
DDR1-271ENST00000513240 TMF1P82094 1093 aa19.49■□□□□ 0.71
DDR1-271ENST00000513240 SMG6Q86US8 1419 aaKnown RBP19.48■□□□□ 0.71
DDR1-271ENST00000513240 CFAP70Q5T0N1 1121 aa19.48■□□□□ 0.71
DDR1-271ENST00000513240 IPO9Q96P70 1041 aaKnown RBP19.48■□□□□ 0.71
DDR1-271ENST00000513240 ADAMTS8Q9UP79 889 aa19.48■□□□□ 0.71
DDR1-271ENST00000513240 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
DDR1-271ENST00000513240 BRPF3Q9ULD4 1205 aa19.46■□□□□ 0.71
DDR1-271ENST00000513240 ARID4BQ4LE39 1312 aaPredicted RBP19.45■□□□□ 0.7
DDR1-271ENST00000513240 GGT6Q6P531 493 aa19.45■□□□□ 0.7
DDR1-271ENST00000513240 KNSTRNQ9Y448 316 aa19.43■□□□□ 0.7
DDR1-271ENST00000513240 LAS1LQ9Y4W2 734 aaKnown RBP19.43■□□□□ 0.7
DDR1-271ENST00000513240 KDM5DQ9BY66 1539 aa19.43■□□□□ 0.7
DDR1-271ENST00000513240 SCAPERQ9BY12 1400 aa19.43■□□□□ 0.7
DDR1-271ENST00000513240 RRP1P56182 461 aaKnown RBP19.42■□□□□ 0.7
DDR1-271ENST00000513240 C20orf194Q5TEA3 1177 aa19.42■□□□□ 0.7
DDR1-271ENST00000513240 ERBINQ96RT1 1412 aa19.42■□□□□ 0.7
DDR1-271ENST00000513240 BRD4O60885 1362 aaPredicted RBP19.41■□□□□ 0.7
DDR1-271ENST00000513240 PREX2Q70Z35 1606 aa19.41■□□□□ 0.7
DDR1-271ENST00000513240 PLCH2O75038 1416 aa19.4■□□□□ 0.7
DDR1-271ENST00000513240 ARHGEF5Q12774 1597 aa19.4■□□□□ 0.7
DDR1-271ENST00000513240 NEFMP07197 916 aa19.39■□□□□ 0.7
DDR1-271ENST00000513240 SAFB2Q14151 953 aaKnown RBP eCLIP19.39■□□□□ 0.7
DDR1-271ENST00000513240 ADGRF5Q8IZF2 1346 aa19.39■□□□□ 0.69
DDR1-271ENST00000513240 TMEM132EQ6IEE7 984 aa19.39■□□□□ 0.69
DDR1-271ENST00000513240 LRPPRCP42704 1394 aaKnown RBP19.38■□□□□ 0.69
DDR1-271ENST00000513240 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
DDR1-271ENST00000513240 NEUROD2Q15784 382 aa19.37■□□□□ 0.69
DDR1-271ENST00000513240 TRAK1Q9UPV9 953 aa19.37■□□□□ 0.69
DDR1-271ENST00000513240 PARD3Q8TEW0 1356 aa19.36■□□□□ 0.69
DDR1-271ENST00000513240 PPP2R1AP30153 589 aa19.35■□□□□ 0.69
DDR1-271ENST00000513240 CRBNQ96SW2 442 aa19.35■□□□□ 0.69
DDR1-271ENST00000513240 WDR43Q15061 677 aaKnown RBP eCLIP19.34■□□□□ 0.69
DDR1-271ENST00000513240 UGGT1Q9NYU2 1555 aa19.33■□□□□ 0.68
DDR1-271ENST00000513240 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
DDR1-271ENST00000513240 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
DDR1-271ENST00000513240 MAGI2Q86UL8 1455 aa19.31■□□□□ 0.68
DDR1-271ENST00000513240 RAPGEF3O95398 923 aa19.3■□□□□ 0.68
DDR1-271ENST00000513240 SPINK5Q9NQ38 1064 aaPredicted RBP19.3■□□□□ 0.68
DDR1-271ENST00000513240 TRPM1Q7Z4N2 1603 aa19.29■□□□□ 0.68
DDR1-271ENST00000513240 AMER1Q5JTC6 1135 aaPredicted RBP19.29■□□□□ 0.68
DDR1-271ENST00000513240 APAF1O14727 1248 aa19.29■□□□□ 0.68
DDR1-271ENST00000513240 RRP7AQ9Y3A4 280 aaKnown RBP19.29■□□□□ 0.68
DDR1-271ENST00000513240 WASHC2CQ9Y4E1 1318 aa19.28■□□□□ 0.68
DDR1-271ENST00000513240 COL17A1Q9UMD9 1497 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms