RNA–Protein interactions for RNA: ENST00000512797.5

RPS3A-211, Transcript of ribosomal protein S3A, humanhuman

TSL 2

Gene RPS3A, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-211ENST00000512797 COL9A1P20849 921 aa12.2□□□□□ -0.46
RPS3A-211ENST00000512797 ARIH1Q9Y4X5 557 aaPredicted RBP12.2□□□□□ -0.46
RPS3A-211ENST00000512797 STAC3Q96MF2 364 aa12.19□□□□□ -0.46
RPS3A-211ENST00000512797 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
RPS3A-211ENST00000512797 BHMG1C9JSJ3 638 aaPredicted RBP12.17□□□□□ -0.46
RPS3A-211ENST00000512797 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
RPS3A-211ENST00000512797 PPP1R3GB7ZBB8 358 aa12.15□□□□□ -0.46
RPS3A-211ENST00000512797 PROX2Q3B8N5 592 aa12.14□□□□□ -0.47
RPS3A-211ENST00000512797 PLCB2Q00722 1185 aa12.13□□□□□ -0.47
RPS3A-211ENST00000512797 NBR1Q14596 966 aa12.13□□□□□ -0.47
RPS3A-211ENST00000512797 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
RPS3A-211ENST00000512797 GRXCR2A6NFK2 248 aa12.12□□□□□ -0.47
RPS3A-211ENST00000512797 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
RPS3A-211ENST00000512797 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
RPS3A-211ENST00000512797 TSR1Q2NL82 804 aaKnown RBP12.09□□□□□ -0.47
RPS3A-211ENST00000512797 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
RPS3A-211ENST00000512797 MRPL50Q8N5N7 158 aaKnown RBP12.08□□□□□ -0.48
RPS3A-211ENST00000512797 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
RPS3A-211ENST00000512797 MAP3K7O43318 606 aa12.07□□□□□ -0.48
RPS3A-211ENST00000512797 RABGEF1Q9UJ41 708 aa12.07□□□□□ -0.48
RPS3A-211ENST00000512797 OSBPP22059 807 aa12.06□□□□□ -0.48
RPS3A-211ENST00000512797 KIAA1468Q9P260 1216 aa12.06□□□□□ -0.48
RPS3A-211ENST00000512797 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
RPS3A-211ENST00000512797 NBPF3Q9H094 633 aa12.04□□□□□ -0.48
RPS3A-211ENST00000512797 GOLGA8CPA6NN73 597 aa12.03□□□□□ -0.48
RPS3A-211ENST00000512797 ONECUT3O60422 494 aaPredicted RBP12.02□□□□□ -0.49
RPS3A-211ENST00000512797 PTPN5P54829 565 aa12.02□□□□□ -0.49
RPS3A-211ENST00000512797 WNT2BQ93097 391 aa12.02□□□□□ -0.49
RPS3A-211ENST00000512797 TRIM6-TRIM34B2RNG4 842 aa12.01□□□□□ -0.49
RPS3A-211ENST00000512797 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
RPS3A-211ENST00000512797 THSD4Q6ZMP0 1018 aa11.99□□□□□ -0.49
RPS3A-211ENST00000512797 TSKSQ9UJT2 592 aa11.99□□□□□ -0.49
RPS3A-211ENST00000512797 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
RPS3A-211ENST00000512797 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
RPS3A-211ENST00000512797 CDHR5Q9HBB8 845 aa11.97□□□□□ -0.49
RPS3A-211ENST00000512797 PRSS12P56730 875 aa11.95□□□□□ -0.5
RPS3A-211ENST00000512797 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
RPS3A-211ENST00000512797 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
RPS3A-211ENST00000512797 FAM198AQ9UFP1 575 aa11.95□□□□□ -0.5
RPS3A-211ENST00000512797 PACS2Q86VP3 889 aa11.93□□□□□ -0.5
RPS3A-211ENST00000512797 ZFRQ96KR1 1074 aaKnown RBP11.93□□□□□ -0.5
RPS3A-211ENST00000512797 NPDC1Q9NQX5 325 aaPredicted RBP11.93□□□□□ -0.5
RPS3A-211ENST00000512797 PLA2G2EQ9NZK7 142 aa11.93□□□□□ -0.5
RPS3A-211ENST00000512797 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
RPS3A-211ENST00000512797 ANKK1Q8NFD2 765 aa11.92□□□□□ -0.5
RPS3A-211ENST00000512797 BCAMP50895 628 aa11.91□□□□□ -0.5
RPS3A-211ENST00000512797 P3H3Q8IVL6 736 aa11.91□□□□□ -0.5
RPS3A-211ENST00000512797 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
RPS3A-211ENST00000512797 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
RPS3A-211ENST00000512797 SMAPO00193 183 aa11.9□□□□□ -0.5
RPS3A-211ENST00000512797 SEMA3EO15041 775 aa11.89□□□□□ -0.51
RPS3A-211ENST00000512797 FAM98CQ17RN3 349 aaKnown RBP11.89□□□□□ -0.51
RPS3A-211ENST00000512797 SOWAHBA6NEL2 793 aa11.88□□□□□ -0.51
RPS3A-211ENST00000512797 TATDN2Q93075 761 aa11.85□□□□□ -0.51
RPS3A-211ENST00000512797 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
RPS3A-211ENST00000512797 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
RPS3A-211ENST00000512797 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
RPS3A-211ENST00000512797 NUDT18Q6ZVK8 323 aa11.82□□□□□ -0.52
RPS3A-211ENST00000512797 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
RPS3A-211ENST00000512797 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.81□□□□□ -0.52
RPS3A-211ENST00000512797 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
RPS3A-211ENST00000512797 LRCH3Q96II8 777 aa11.8□□□□□ -0.52
RPS3A-211ENST00000512797 NBPF26B4DH59 902 aa11.79□□□□□ -0.52
RPS3A-211ENST00000512797 NUTM2FA1L443 756 aa11.78□□□□□ -0.52
RPS3A-211ENST00000512797 PTGDRQ13258 359 aa11.78□□□□□ -0.52
RPS3A-211ENST00000512797 SAMD7Q7Z3H4 446 aa11.78□□□□□ -0.52
RPS3A-211ENST00000512797 HPS5Q9UPZ3 1129 aa11.78□□□□□ -0.52
RPS3A-211ENST00000512797 TESPA1A2RU30 521 aaPredicted RBP11.77□□□□□ -0.53
RPS3A-211ENST00000512797 TSR3Q9UJK0 312 aaKnown RBP11.77□□□□□ -0.53
RPS3A-211ENST00000512797 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
RPS3A-211ENST00000512797 RBM26Q5T8P6 1007 aaKnown RBP11.73□□□□□ -0.53
RPS3A-211ENST00000512797 EYA1Q99502 592 aa11.73□□□□□ -0.53
RPS3A-211ENST00000512797 PPP4CP60510 307 aa11.72□□□□□ -0.53
RPS3A-211ENST00000512797 IFFO2Q5TF58 517 aa11.72□□□□□ -0.53
RPS3A-211ENST00000512797 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.53
RPS3A-211ENST00000512797 FCHSD2O94868 740 aa11.69□□□□□ -0.54
RPS3A-211ENST00000512797 HDGFP51858 240 aaKnown RBP11.69□□□□□ -0.54
RPS3A-211ENST00000512797 FAM161AQ3B820 660 aa11.69□□□□□ -0.54
RPS3A-211ENST00000512797 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
RPS3A-211ENST00000512797 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
RPS3A-211ENST00000512797 SMYD5Q6GMV2 418 aa11.68□□□□□ -0.54
RPS3A-211ENST00000512797 ADGRG1Q9Y653 693 aa11.67□□□□□ -0.54
RPS3A-211ENST00000512797 RNF40O75150 1001 aa11.65□□□□□ -0.54
RPS3A-211ENST00000512797 A0A0G2JS52 829 aa11.62□□□□□ -0.55
RPS3A-211ENST00000512797 KCNC4Q03721 635 aa11.62□□□□□ -0.55
RPS3A-211ENST00000512797 RBM46Q8TBY0 533 aaKnown RBP11.62□□□□□ -0.55
RPS3A-211ENST00000512797 FECHP22830 423 aa11.61□□□□□ -0.55
RPS3A-211ENST00000512797 APLP1P51693 650 aa11.6□□□□□ -0.55
RPS3A-211ENST00000512797 HIC1Q14526 733 aa11.6□□□□□ -0.55
RPS3A-211ENST00000512797 TJAP1Q5JTD0 557 aa11.6□□□□□ -0.55
RPS3A-211ENST00000512797 RCCD1A6NED2 376 aa11.59□□□□□ -0.55
RPS3A-211ENST00000512797 GPR37O15354 613 aa11.59□□□□□ -0.55
RPS3A-211ENST00000512797 DNAJB2P25686 324 aa11.59□□□□□ -0.55
RPS3A-211ENST00000512797 SLF2Q8IX21 1173 aa11.59□□□□□ -0.55
RPS3A-211ENST00000512797 TMEM134Q9H6X4 195 aa11.57□□□□□ -0.56
RPS3A-211ENST00000512797 MTRQ99707 1265 aa11.56□□□□□ -0.56
RPS3A-211ENST00000512797 GNPATO15228 680 aa11.55□□□□□ -0.56
RPS3A-211ENST00000512797 PXYLP1Q8TE99 480 aa11.55□□□□□ -0.56
RPS3A-211ENST00000512797 OATP04181 439 aa11.54□□□□□ -0.56
RPS3A-211ENST00000512797 ZNF516Q92618 1163 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms