RNA–Protein interactions for RNA: ENST00000512554.1

GCSHP1-201, Transcript of glycine cleavage system protein H pseudogene 1, humanhuman

BASIC

Gene GCSHP1, Length 484 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP1-201ENST00000512554 KIAA0556O60303 1618 aa11.72□□□□□ -0.53
GCSHP1-201ENST00000512554 FYCO1Q9BQS8 1478 aa11.72□□□□□ -0.53
GCSHP1-201ENST00000512554 CLASP1Q7Z460 1538 aa11.7□□□□□ -0.54
GCSHP1-201ENST00000512554 FHOD3Q2V2M9 1422 aa11.7□□□□□ -0.54
GCSHP1-201ENST00000512554 FBXO22Q8NEZ5 403 aa11.7□□□□□ -0.54
GCSHP1-201ENST00000512554 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
GCSHP1-201ENST00000512554 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
GCSHP1-201ENST00000512554 MFRPQ9BY79 579 aa11.69□□□□□ -0.54
GCSHP1-201ENST00000512554 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
GCSHP1-201ENST00000512554 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
GCSHP1-201ENST00000512554 PCF11O94913 1555 aaKnown RBP11.67□□□□□ -0.54
GCSHP1-201ENST00000512554 CFAP43Q8NDM7 1665 aa11.66□□□□□ -0.54
GCSHP1-201ENST00000512554 POTEB3A0JP26 581 aa11.66□□□□□ -0.54
GCSHP1-201ENST00000512554 POTEBQ6S5H4 581 aa11.66□□□□□ -0.54
GCSHP1-201ENST00000512554 TIAM1Q13009 1591 aa11.66□□□□□ -0.54
GCSHP1-201ENST00000512554 EMP3P54852 163 aa11.64□□□□□ -0.55
GCSHP1-201ENST00000512554 NLRP6P59044 892 aa11.64□□□□□ -0.55
GCSHP1-201ENST00000512554 TAOK2Q9UL54 1235 aa11.64□□□□□ -0.55
GCSHP1-201ENST00000512554 CCDC18Q5T9S5 1454 aa11.63□□□□□ -0.55
GCSHP1-201ENST00000512554 RANGAP1P46060 587 aaPredicted RBP11.62□□□□□ -0.55
GCSHP1-201ENST00000512554 HECW1Q76N89 1606 aa11.61□□□□□ -0.55
GCSHP1-201ENST00000512554 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
GCSHP1-201ENST00000512554 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
GCSHP1-201ENST00000512554 FAM205CA6NFA0 338 aa11.6□□□□□ -0.55
GCSHP1-201ENST00000512554 PRG4Q92954 1404 aaPredicted RBP11.6□□□□□ -0.55
GCSHP1-201ENST00000512554 ABCA8O94911 1581 aa11.59□□□□□ -0.55
GCSHP1-201ENST00000512554 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
GCSHP1-201ENST00000512554 RAPGEF6Q8TEU7 1601 aa11.59□□□□□ -0.55
GCSHP1-201ENST00000512554 HS3ST6Q96QI5 342 aa11.58□□□□□ -0.56
GCSHP1-201ENST00000512554 EPRSP07814 1512 aaKnown RBP11.57□□□□□ -0.56
GCSHP1-201ENST00000512554 KANK4Q5T7N3 995 aaPredicted RBP11.57□□□□□ -0.56
GCSHP1-201ENST00000512554 NUP153P49790 1475 aaKnown RBP11.57□□□□□ -0.56
GCSHP1-201ENST00000512554 ZNF710Q8N1W2 664 aa11.56□□□□□ -0.56
GCSHP1-201ENST00000512554 RRBP1Q9P2E9 1410 aaKnown RBP11.56□□□□□ -0.56
GCSHP1-201ENST00000512554 ARHGEF11O15085 1522 aa11.55□□□□□ -0.56
GCSHP1-201ENST00000512554 PTPRGP23470 1445 aa11.54□□□□□ -0.56
GCSHP1-201ENST00000512554 PPP1R37O75864 691 aa11.54□□□□□ -0.56
GCSHP1-201ENST00000512554 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
GCSHP1-201ENST00000512554 UHRF1BP1LA0JNW5 1464 aa11.54□□□□□ -0.56
GCSHP1-201ENST00000512554 EHBP1L1Q8N3D4 1523 aa11.54□□□□□ -0.56
GCSHP1-201ENST00000512554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.53□□□□□ -0.56
GCSHP1-201ENST00000512554 HOXB1P14653 301 aaPredicted RBP11.52□□□□□ -0.57
GCSHP1-201ENST00000512554 PLB1Q6P1J6 1458 aa11.51□□□□□ -0.57
GCSHP1-201ENST00000512554 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
GCSHP1-201ENST00000512554 PCGF6Q9BYE7 350 aa11.5□□□□□ -0.57
GCSHP1-201ENST00000512554 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
GCSHP1-201ENST00000512554 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
GCSHP1-201ENST00000512554 UACAQ9BZF9 1416 aa11.5□□□□□ -0.57
GCSHP1-201ENST00000512554 MAGI3Q5TCQ9 1506 aa11.5□□□□□ -0.57
GCSHP1-201ENST00000512554 ABCC2Q92887 1545 aa11.49□□□□□ -0.57
GCSHP1-201ENST00000512554 SUPT6HQ7KZ85 1726 aaKnown RBP11.49□□□□□ -0.57
GCSHP1-201ENST00000512554 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.57
GCSHP1-201ENST00000512554 ATP10BO94823 1461 aa11.48□□□□□ -0.57
GCSHP1-201ENST00000512554 ADCY10Q96PN6 1610 aa11.48□□□□□ -0.57
GCSHP1-201ENST00000512554 MTUS2Q5JR59 1369 aa11.47□□□□□ -0.57
GCSHP1-201ENST00000512554 C2orf72A6NCS6 295 aa11.47□□□□□ -0.57
GCSHP1-201ENST00000512554 PPARGC1BQ86YN6 1023 aaKnown RBP11.47□□□□□ -0.57
GCSHP1-201ENST00000512554 SPNS2Q8IVW8 549 aa11.47□□□□□ -0.57
GCSHP1-201ENST00000512554 CDK13Q14004 1512 aaKnown RBP11.46□□□□□ -0.57
GCSHP1-201ENST00000512554 KDM5BQ9UGL1 1544 aa11.46□□□□□ -0.57
GCSHP1-201ENST00000512554 NCOA2Q15596 1464 aa11.46□□□□□ -0.57
GCSHP1-201ENST00000512554 TROQ12816 1431 aaPredicted RBP11.46□□□□□ -0.57
GCSHP1-201ENST00000512554 KIF3CO14782 793 aa11.46□□□□□ -0.57
GCSHP1-201ENST00000512554 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
GCSHP1-201ENST00000512554 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
GCSHP1-201ENST00000512554 HS6ST3Q8IZP7 471 aa11.46□□□□□ -0.57
GCSHP1-201ENST00000512554 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.57
GCSHP1-201ENST00000512554 PHLDB1Q86UU1 1377 aa11.45□□□□□ -0.58
GCSHP1-201ENST00000512554 ERBB3P21860 1342 aa11.45□□□□□ -0.58
GCSHP1-201ENST00000512554 MIA2Q96PC5 1412 aa11.44□□□□□ -0.58
GCSHP1-201ENST00000512554 CCNB3Q8WWL7 1395 aa11.44□□□□□ -0.58
GCSHP1-201ENST00000512554 RIMBP2O15034 1052 aa11.44□□□□□ -0.58
GCSHP1-201ENST00000512554 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
GCSHP1-201ENST00000512554 VARS2Q5ST30 1063 aaKnown RBP11.43□□□□□ -0.58
GCSHP1-201ENST00000512554 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
GCSHP1-201ENST00000512554 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
GCSHP1-201ENST00000512554 TCOF1Q13428 1488 aaKnown RBP11.42□□□□□ -0.58
GCSHP1-201ENST00000512554 FGD6Q6ZV73 1430 aa11.42□□□□□ -0.58
GCSHP1-201ENST00000512554 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
GCSHP1-201ENST00000512554 ABCC10Q5T3U5 1492 aa11.4□□□□□ -0.58
GCSHP1-201ENST00000512554 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
GCSHP1-201ENST00000512554 ZSWIM6Q9HCJ5 1215 aa11.39□□□□□ -0.59
GCSHP1-201ENST00000512554 PLEKHD1A6NEE1 506 aa11.38□□□□□ -0.59
GCSHP1-201ENST00000512554 KIF14Q15058 1648 aa11.36□□□□□ -0.59
GCSHP1-201ENST00000512554 ZCCHC11Q5TAX3 1644 aaKnown RBP11.36□□□□□ -0.59
GCSHP1-201ENST00000512554 ITSN2Q9NZM3 1697 aa11.36□□□□□ -0.59
GCSHP1-201ENST00000512554 HRCP23327 699 aa11.35□□□□□ -0.59
GCSHP1-201ENST00000512554 TMC2Q8TDI7 906 aa11.35□□□□□ -0.59
GCSHP1-201ENST00000512554 PTPN23Q9H3S7 1636 aa11.35□□□□□ -0.59
GCSHP1-201ENST00000512554 GPATCH8Q9UKJ3 1502 aaKnown RBP11.35□□□□□ -0.59
GCSHP1-201ENST00000512554 NUDT7P0C024 238 aa11.33□□□□□ -0.6
GCSHP1-201ENST00000512554 ARAP3Q8WWN8 1544 aa11.33□□□□□ -0.6
GCSHP1-201ENST00000512554 TTBK1Q5TCY1 1321 aaPredicted RBP11.33□□□□□ -0.6
GCSHP1-201ENST00000512554 AKNAQ7Z591 1439 aa11.32□□□□□ -0.6
GCSHP1-201ENST00000512554 CDC42BPAQ5VT25 1732 aa11.32□□□□□ -0.6
GCSHP1-201ENST00000512554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.3□□□□□ -0.6
GCSHP1-201ENST00000512554 RIMBP3CA6NJZ7 1639 aa11.29□□□□□ -0.6
GCSHP1-201ENST00000512554 RIMBP3BA6NNM3 1639 aa11.29□□□□□ -0.6
GCSHP1-201ENST00000512554 PREX2Q70Z35 1606 aa11.29□□□□□ -0.6
GCSHP1-201ENST00000512554 RIMBP3Q9UFD9 1639 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms