RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 ANKK1Q8NFD2 765 aa14.61□□□□□ -0.07
NPHP3-210ENST00000512094 A0A0G2JS52 829 aa14.6□□□□□ -0.07
NPHP3-210ENST00000512094 RGS20O76081 388 aa14.6□□□□□ -0.07
NPHP3-210ENST00000512094 CAMK2BQ13554 666 aa14.56□□□□□ -0.08
NPHP3-210ENST00000512094 DPYSL4O14531 572 aa14.55□□□□□ -0.08
NPHP3-210ENST00000512094 BCAMP50895 628 aa14.54□□□□□ -0.08
NPHP3-210ENST00000512094 EPAS1Q99814 870 aa14.54□□□□□ -0.08
NPHP3-210ENST00000512094 LAPTM4BQ86VI4 370 aa14.53□□□□□ -0.08
NPHP3-210ENST00000512094 KIAA1468Q9P260 1216 aa14.53□□□□□ -0.08
NPHP3-210ENST00000512094 C6orf132Q5T0Z8 1188 aa14.52□□□□□ -0.09
NPHP3-210ENST00000512094 SOWAHBA6NEL2 793 aa14.5□□□□□ -0.09
NPHP3-210ENST00000512094 ZFRQ96KR1 1074 aaKnown RBP14.49□□□□□ -0.09
NPHP3-210ENST00000512094 ONECUT3O60422 494 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-210ENST00000512094 ITGBL1O95965 494 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-210ENST00000512094 RBM33Q96EV2 1170 aaKnown RBP14.48□□□□□ -0.09
NPHP3-210ENST00000512094 IRX2Q9BZI1 471 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-210ENST00000512094 SEPT9Q9UHD8 586 aaPredicted RBP14.48□□□□□ -0.09
NPHP3-210ENST00000512094 DDX12PQ92771 950 aa14.46□□□□□ -0.09
NPHP3-210ENST00000512094 TRIM6-TRIM34B2RNG4 842 aa14.45□□□□□ -0.1
NPHP3-210ENST00000512094 NYAP1Q6ZVC0 841 aa14.43□□□□□ -0.1
NPHP3-210ENST00000512094 WBP1LQ9NX94 342 aa14.43□□□□□ -0.1
NPHP3-210ENST00000512094 FAM98CQ17RN3 349 aaKnown RBP14.4□□□□□ -0.1
NPHP3-210ENST00000512094 NBR1Q14596 966 aa14.39□□□□□ -0.11
NPHP3-210ENST00000512094 EN1Q05925 392 aaPredicted RBP14.37□□□□□ -0.11
NPHP3-210ENST00000512094 BBXQ8WY36 941 aaPredicted RBP14.37□□□□□ -0.11
NPHP3-210ENST00000512094 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.37□□□□□ -0.11
NPHP3-210ENST00000512094 LRCH3Q96II8 777 aa14.36□□□□□ -0.11
NPHP3-210ENST00000512094 MAP3K7O43318 606 aa14.35□□□□□ -0.11
NPHP3-210ENST00000512094 PDIA6Q15084 440 aa14.35□□□□□ -0.11
NPHP3-210ENST00000512094 HPS5Q9UPZ3 1129 aa14.35□□□□□ -0.11
NPHP3-210ENST00000512094 KCNC4Q03721 635 aa14.34□□□□□ -0.11
NPHP3-210ENST00000512094 TSR1Q2NL82 804 aaKnown RBP14.34□□□□□ -0.11
NPHP3-210ENST00000512094 TSR3Q9UJK0 312 aaKnown RBP14.34□□□□□ -0.11
NPHP3-210ENST00000512094 TSKSQ9UJT2 592 aa14.32□□□□□ -0.12
NPHP3-210ENST00000512094 PACS2Q86VP3 889 aa14.31□□□□□ -0.12
NPHP3-210ENST00000512094 SPDYE16A6NNV3 312 aaPredicted RBP14.29□□□□□ -0.12
NPHP3-210ENST00000512094 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
NPHP3-210ENST00000512094 CDCA7LQ96GN5 454 aa14.24□□□□□ -0.13
NPHP3-210ENST00000512094 SMAPO00193 183 aa14.22□□□□□ -0.13
NPHP3-210ENST00000512094 PPP4CP60510 307 aa14.22□□□□□ -0.13
NPHP3-210ENST00000512094 E2F4Q16254 413 aa14.22□□□□□ -0.13
NPHP3-210ENST00000512094 PRSS12P56730 875 aa14.21□□□□□ -0.13
NPHP3-210ENST00000512094 FAM198AQ9UFP1 575 aa14.2□□□□□ -0.14
NPHP3-210ENST00000512094 GRXCR2A6NFK2 248 aa14.19□□□□□ -0.14
NPHP3-210ENST00000512094 PRIM1P49642 420 aaKnown RBP14.19□□□□□ -0.14
NPHP3-210ENST00000512094 Q6ZNB5 142 aa14.19□□□□□ -0.14
NPHP3-210ENST00000512094 SAMD7Q7Z3H4 446 aa14.19□□□□□ -0.14
NPHP3-210ENST00000512094 CERKQ8TCT0 537 aa14.19□□□□□ -0.14
NPHP3-210ENST00000512094 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.18□□□□□ -0.14
NPHP3-210ENST00000512094 NBPF26B4DH59 902 aa14.16□□□□□ -0.14
NPHP3-210ENST00000512094 PNMA3Q9UL41 463 aa14.16□□□□□ -0.14
NPHP3-210ENST00000512094 C3orf80F5H4A9 247 aa14.15□□□□□ -0.14
NPHP3-210ENST00000512094 ARIH1Q9Y4X5 557 aaPredicted RBP14.15□□□□□ -0.14
NPHP3-210ENST00000512094 TATDN2Q93075 761 aa14.14□□□□□ -0.15
NPHP3-210ENST00000512094 WDR70Q9NW82 654 aa14.14□□□□□ -0.15
NPHP3-210ENST00000512094 TJAP1Q5JTD0 557 aa14.13□□□□□ -0.15
NPHP3-210ENST00000512094 CDHR5Q9HBB8 845 aa14.12□□□□□ -0.15
NPHP3-210ENST00000512094 RNF40O75150 1001 aa14.09□□□□□ -0.15
NPHP3-210ENST00000512094 OSBPP22059 807 aa14.09□□□□□ -0.15
NPHP3-210ENST00000512094 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
NPHP3-210ENST00000512094 MTRQ99707 1265 aa14.09□□□□□ -0.15
NPHP3-210ENST00000512094 NUDT18Q6ZVK8 323 aa14.08□□□□□ -0.16
NPHP3-210ENST00000512094 PAXIP1Q6ZW49 1069 aaPredicted RBP14.08□□□□□ -0.16
NPHP3-210ENST00000512094 IL21Q9HBE4 155 aa14.08□□□□□ -0.16
NPHP3-210ENST00000512094 RBM27Q9P2N5 1060 aaKnown RBP14.07□□□□□ -0.16
NPHP3-210ENST00000512094 LAPTM4AQ15012 233 aa14.06□□□□□ -0.16
NPHP3-210ENST00000512094 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
NPHP3-210ENST00000512094 PRKD2Q9BZL6 878 aa14.02□□□□□ -0.17
NPHP3-210ENST00000512094 GFRA3O60609 400 aa14.01□□□□□ -0.17
NPHP3-210ENST00000512094 APLP1P51693 650 aa14.01□□□□□ -0.17
NPHP3-210ENST00000512094 PPP1R18Q6NYC8 613 aa14.01□□□□□ -0.17
NPHP3-210ENST00000512094 ZNF516Q92618 1163 aa14□□□□□ -0.17
NPHP3-210ENST00000512094 PADI6Q6TGC4 694 aa13.98□□□□□ -0.17
NPHP3-210ENST00000512094 TTC13Q8NBP0 860 aa13.97□□□□□ -0.17
NPHP3-210ENST00000512094 AMER1Q5JTC6 1135 aaPredicted RBP13.96□□□□□ -0.17
NPHP3-210ENST00000512094 SWT1Q5T5J6 900 aaKnown RBP13.96□□□□□ -0.17
NPHP3-210ENST00000512094 NECTIN2Q92692 538 aa13.96□□□□□ -0.17
NPHP3-210ENST00000512094 NPDC1Q9NQX5 325 aaPredicted RBP13.96□□□□□ -0.17
NPHP3-210ENST00000512094 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.95□□□□□ -0.18
NPHP3-210ENST00000512094 LCE2BO14633 110 aa13.94□□□□□ -0.18
NPHP3-210ENST00000512094 SLF2Q8IX21 1173 aa13.94□□□□□ -0.18
NPHP3-210ENST00000512094 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
NPHP3-210ENST00000512094 TRAF7Q6Q0C0 670 aa13.92□□□□□ -0.18
NPHP3-210ENST00000512094 NKX2-3Q8TAU0 364 aa13.92□□□□□ -0.18
NPHP3-210ENST00000512094 NRG2O14511 850 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-210ENST00000512094 COPS2P61201 443 aa13.91□□□□□ -0.18
NPHP3-210ENST00000512094 SLC4A3P48751 1232 aa13.88□□□□□ -0.19
NPHP3-210ENST00000512094 GGCXP38435 758 aa13.87□□□□□ -0.19
NPHP3-210ENST00000512094 EYA1Q99502 592 aa13.86□□□□□ -0.19
NPHP3-210ENST00000512094 RTN4Q9NQC3 1192 aaKnown RBP13.86□□□□□ -0.19
NPHP3-210ENST00000512094 ZPR1O75312 459 aa13.82□□□□□ -0.2
NPHP3-210ENST00000512094 MLLT3P42568 568 aaPredicted RBP13.82□□□□□ -0.2
NPHP3-210ENST00000512094 PRR14Q9BWN1 585 aa13.82□□□□□ -0.2
NPHP3-210ENST00000512094 PDZRN3Q9UPQ7 1066 aa13.81□□□□□ -0.2
NPHP3-210ENST00000512094 PCDHB3Q9Y5E6 796 aa13.81□□□□□ -0.2
NPHP3-210ENST00000512094 TMUB1Q9BVT8 246 aa13.79□□□□□ -0.2
NPHP3-210ENST00000512094 ARHGEF1Q92888 912 aaKnown RBP13.78□□□□□ -0.2
NPHP3-210ENST00000512094 DNAJB2P25686 324 aa13.77□□□□□ -0.21
NPHP3-210ENST00000512094 BLOC1S3Q6QNY0 202 aa13.76□□□□□ -0.21
NPHP3-210ENST00000512094 PTGDRQ13258 359 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms