RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 KCNH8Q96L42 1107 aa11.57□□□□□ -0.56
PDE4D-220ENST00000512069 EPAS1Q99814 870 aa11.57□□□□□ -0.56
PDE4D-220ENST00000512069 NBR1Q14596 966 aa11.56□□□□□ -0.56
PDE4D-220ENST00000512069 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
PDE4D-220ENST00000512069 ADGRD1Q6QNK2 874 aa11.55□□□□□ -0.56
PDE4D-220ENST00000512069 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
PDE4D-220ENST00000512069 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
PDE4D-220ENST00000512069 COL9A1P20849 921 aa11.52□□□□□ -0.57
PDE4D-220ENST00000512069 MLLT3P42568 568 aaPredicted RBP11.51□□□□□ -0.57
PDE4D-220ENST00000512069 TK2O00142 265 aa11.5□□□□□ -0.57
PDE4D-220ENST00000512069 SEMA3EO15041 775 aa11.5□□□□□ -0.57
PDE4D-220ENST00000512069 MAP3K7O43318 606 aa11.5□□□□□ -0.57
PDE4D-220ENST00000512069 ZBED2Q9BTP6 218 aa11.5□□□□□ -0.57
PDE4D-220ENST00000512069 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
PDE4D-220ENST00000512069 VPS9D1Q9Y2B5 631 aa11.5□□□□□ -0.57
PDE4D-220ENST00000512069 OSBPP22059 807 aa11.49□□□□□ -0.57
PDE4D-220ENST00000512069 EN1Q05925 392 aaPredicted RBP11.49□□□□□ -0.57
PDE4D-220ENST00000512069 TSR1Q2NL82 804 aaKnown RBP11.49□□□□□ -0.57
PDE4D-220ENST00000512069 HRO43593 1189 aa11.48□□□□□ -0.57
PDE4D-220ENST00000512069 TESPA1A2RU30 521 aaPredicted RBP11.47□□□□□ -0.57
PDE4D-220ENST00000512069 PPP1R3GB7ZBB8 358 aa11.47□□□□□ -0.57
PDE4D-220ENST00000512069 PROX2Q3B8N5 592 aa11.46□□□□□ -0.57
PDE4D-220ENST00000512069 SLC4A5Q9BY07 1137 aa11.45□□□□□ -0.58
PDE4D-220ENST00000512069 SMYD5Q6GMV2 418 aa11.44□□□□□ -0.58
PDE4D-220ENST00000512069 RNF166Q96A37 237 aaPredicted RBP11.44□□□□□ -0.58
PDE4D-220ENST00000512069 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
PDE4D-220ENST00000512069 CDHR5Q9HBB8 845 aa11.41□□□□□ -0.58
PDE4D-220ENST00000512069 BHMG1C9JSJ3 638 aaPredicted RBP11.4□□□□□ -0.58
PDE4D-220ENST00000512069 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
PDE4D-220ENST00000512069 RABGEF1Q9UJ41 708 aa11.36□□□□□ -0.59
PDE4D-220ENST00000512069 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
PDE4D-220ENST00000512069 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
PDE4D-220ENST00000512069 TSKSQ9UJT2 592 aa11.35□□□□□ -0.59
PDE4D-220ENST00000512069 KCTD12Q96CX2 325 aaKnown RBP11.34□□□□□ -0.59
PDE4D-220ENST00000512069 NPDC1Q9NQX5 325 aaPredicted RBP11.34□□□□□ -0.59
PDE4D-220ENST00000512069 PRSS12P56730 875 aa11.33□□□□□ -0.6
PDE4D-220ENST00000512069 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
PDE4D-220ENST00000512069 NBPF3Q9H094 633 aa11.33□□□□□ -0.6
PDE4D-220ENST00000512069 TULP1O00294 542 aaPredicted RBP11.32□□□□□ -0.6
PDE4D-220ENST00000512069 CERKQ8TCT0 537 aa11.32□□□□□ -0.6
PDE4D-220ENST00000512069 FAM198AQ9UFP1 575 aa11.32□□□□□ -0.6
PDE4D-220ENST00000512069 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
PDE4D-220ENST00000512069 ONECUT3O60422 494 aaPredicted RBP11.31□□□□□ -0.6
PDE4D-220ENST00000512069 BCANQ96GW7 911 aa11.31□□□□□ -0.6
PDE4D-220ENST00000512069 SEPT9Q9UHD8 586 aaPredicted RBP11.31□□□□□ -0.6
PDE4D-220ENST00000512069 GOLGA8CPA6NN73 597 aa11.3□□□□□ -0.6
PDE4D-220ENST00000512069 RBM26Q5T8P6 1007 aaKnown RBP11.3□□□□□ -0.6
PDE4D-220ENST00000512069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDE4D-220ENST00000512069 C3orf80F5H4A9 247 aa11.29□□□□□ -0.6
PDE4D-220ENST00000512069 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
PDE4D-220ENST00000512069 SMAPO00193 183 aa11.27□□□□□ -0.61
PDE4D-220ENST00000512069 WNT2BQ93097 391 aa11.27□□□□□ -0.61
PDE4D-220ENST00000512069 PTGDRQ13258 359 aa11.26□□□□□ -0.61
PDE4D-220ENST00000512069 PADI6Q6TGC4 694 aa11.25□□□□□ -0.61
PDE4D-220ENST00000512069 PTPN5P54829 565 aa11.24□□□□□ -0.61
PDE4D-220ENST00000512069 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
PDE4D-220ENST00000512069 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
PDE4D-220ENST00000512069 TATDN2Q93075 761 aa11.23□□□□□ -0.61
PDE4D-220ENST00000512069 HCSTQ9UBK5 93 aa11.23□□□□□ -0.61
PDE4D-220ENST00000512069 FCHSD2O94868 740 aa11.22□□□□□ -0.61
PDE4D-220ENST00000512069 FAM98CQ17RN3 349 aaKnown RBP11.22□□□□□ -0.61
PDE4D-220ENST00000512069 THSD4Q6ZMP0 1018 aa11.22□□□□□ -0.61
PDE4D-220ENST00000512069 NUDT18Q6ZVK8 323 aa11.22□□□□□ -0.61
PDE4D-220ENST00000512069 TTC13Q8NBP0 860 aa11.22□□□□□ -0.61
PDE4D-220ENST00000512069 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
PDE4D-220ENST00000512069 PNMA3Q9UL41 463 aa11.22□□□□□ -0.61
PDE4D-220ENST00000512069 BCAMP50895 628 aa11.2□□□□□ -0.62
PDE4D-220ENST00000512069 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
PDE4D-220ENST00000512069 ANKK1Q8NFD2 765 aa11.2□□□□□ -0.62
PDE4D-220ENST00000512069 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
PDE4D-220ENST00000512069 HIC1Q14526 733 aa11.18□□□□□ -0.62
PDE4D-220ENST00000512069 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
PDE4D-220ENST00000512069 GPIHBP1Q8IV16 184 aa11.18□□□□□ -0.62
PDE4D-220ENST00000512069 GPR37O15354 613 aa11.17□□□□□ -0.62
PDE4D-220ENST00000512069 SOWAHBA6NEL2 793 aa11.15□□□□□ -0.62
PDE4D-220ENST00000512069 FECHP22830 423 aa11.15□□□□□ -0.62
PDE4D-220ENST00000512069 GNPATO15228 680 aa11.14□□□□□ -0.63
PDE4D-220ENST00000512069 SAMD7Q7Z3H4 446 aa11.14□□□□□ -0.63
PDE4D-220ENST00000512069 EYA1Q99502 592 aa11.13□□□□□ -0.63
PDE4D-220ENST00000512069 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.13□□□□□ -0.63
PDE4D-220ENST00000512069 LRCH3Q96II8 777 aa11.12□□□□□ -0.63
PDE4D-220ENST00000512069 WBP1LQ9NX94 342 aa11.11□□□□□ -0.63
PDE4D-220ENST00000512069 ADGRG1Q9Y653 693 aa11.11□□□□□ -0.63
PDE4D-220ENST00000512069 ZC3H15Q8WU90 426 aaKnown RBP11.09□□□□□ -0.63
PDE4D-220ENST00000512069 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
PDE4D-220ENST00000512069 HDGFP51858 240 aaKnown RBP11.07□□□□□ -0.64
PDE4D-220ENST00000512069 SWT1Q5T5J6 900 aaKnown RBP11.07□□□□□ -0.64
PDE4D-220ENST00000512069 RBM46Q8TBY0 533 aaKnown RBP11.07□□□□□ -0.64
PDE4D-220ENST00000512069 TSR3Q9UJK0 312 aaKnown RBP11.07□□□□□ -0.64
PDE4D-220ENST00000512069 RNF40O75150 1001 aa11.06□□□□□ -0.64
PDE4D-220ENST00000512069 ZMYND10O75800 440 aa11.06□□□□□ -0.64
PDE4D-220ENST00000512069 OATP04181 439 aa11.05□□□□□ -0.64
PDE4D-220ENST00000512069 PPP4CP60510 307 aa11.05□□□□□ -0.64
PDE4D-220ENST00000512069 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
PDE4D-220ENST00000512069 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
PDE4D-220ENST00000512069 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
PDE4D-220ENST00000512069 RCCD1A6NED2 376 aa11.03□□□□□ -0.64
PDE4D-220ENST00000512069 PXYLP1Q8TE99 480 aa11.03□□□□□ -0.64
PDE4D-220ENST00000512069 MAP2K5Q13163 448 aa11.02□□□□□ -0.65
PDE4D-220ENST00000512069 IRF6O14896 467 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms