RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MRPL50Q8N5N7 158 aaKnown RBP10.25□□□□□ -0.77
HMGB3P13-201ENST00000511263 GOLGA8CPA6NN73 597 aa10.24□□□□□ -0.77
HMGB3P13-201ENST00000511263 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
HMGB3P13-201ENST00000511263 PROX2Q3B8N5 592 aa10.24□□□□□ -0.77
HMGB3P13-201ENST00000511263 TSHZ2Q9NRE2 1034 aa10.24□□□□□ -0.77
HMGB3P13-201ENST00000511263 COL9A1P20849 921 aa10.23□□□□□ -0.77
HMGB3P13-201ENST00000511263 NBPF3Q9H094 633 aa10.2□□□□□ -0.78
HMGB3P13-201ENST00000511263 PPP1R3GB7ZBB8 358 aa10.19□□□□□ -0.78
HMGB3P13-201ENST00000511263 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
HMGB3P13-201ENST00000511263 RABGEF1Q9UJ41 708 aa10.17□□□□□ -0.78
HMGB3P13-201ENST00000511263 PHF14O94880 888 aa10.16□□□□□ -0.78
HMGB3P13-201ENST00000511263 IFFO2Q5TF58 517 aa10.16□□□□□ -0.78
HMGB3P13-201ENST00000511263 DPYSL4O14531 572 aa10.15□□□□□ -0.78
HMGB3P13-201ENST00000511263 P3H3Q8IVL6 736 aa10.15□□□□□ -0.78
HMGB3P13-201ENST00000511263 A0A0G2JS52 829 aa10.14□□□□□ -0.79
HMGB3P13-201ENST00000511263 BCAMP50895 628 aa10.14□□□□□ -0.79
HMGB3P13-201ENST00000511263 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
HMGB3P13-201ENST00000511263 FBXW7Q969H0 707 aa10.14□□□□□ -0.79
HMGB3P13-201ENST00000511263 KIAA1468Q9P260 1216 aa10.12□□□□□ -0.79
HMGB3P13-201ENST00000511263 C6orf132Q5T0Z8 1188 aa10.11□□□□□ -0.79
HMGB3P13-201ENST00000511263 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
HMGB3P13-201ENST00000511263 E2F4Q16254 413 aa10.1□□□□□ -0.79
HMGB3P13-201ENST00000511263 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
HMGB3P13-201ENST00000511263 RBM33Q96EV2 1170 aaKnown RBP10.09□□□□□ -0.79
HMGB3P13-201ENST00000511263 DDX12PQ92771 950 aa10.08□□□□□ -0.8
HMGB3P13-201ENST00000511263 ZFRQ96KR1 1074 aaKnown RBP10.08□□□□□ -0.8
HMGB3P13-201ENST00000511263 SOWAHBA6NEL2 793 aa10.07□□□□□ -0.8
HMGB3P13-201ENST00000511263 RGS20O76081 388 aa10.07□□□□□ -0.8
HMGB3P13-201ENST00000511263 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
HMGB3P13-201ENST00000511263 EPAS1Q99814 870 aa10.07□□□□□ -0.8
HMGB3P13-201ENST00000511263 WBP1LQ9NX94 342 aa10.06□□□□□ -0.8
HMGB3P13-201ENST00000511263 TRIM6-TRIM34B2RNG4 842 aa10.05□□□□□ -0.8
HMGB3P13-201ENST00000511263 ITGBL1O95965 494 aaPredicted RBP10.05□□□□□ -0.8
HMGB3P13-201ENST00000511263 IRX2Q9BZI1 471 aaPredicted RBP10.04□□□□□ -0.8
HMGB3P13-201ENST00000511263 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.81
HMGB3P13-201ENST00000511263 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.81
HMGB3P13-201ENST00000511263 KDM2AQ9Y2K7 1162 aa10.01□□□□□ -0.81
HMGB3P13-201ENST00000511263 NBR1Q14596 966 aa10□□□□□ -0.81
HMGB3P13-201ENST00000511263 FAM98CQ17RN3 349 aaKnown RBP10□□□□□ -0.81
HMGB3P13-201ENST00000511263 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
HMGB3P13-201ENST00000511263 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
HMGB3P13-201ENST00000511263 ARIH1Q9Y4X5 557 aaPredicted RBP9.99□□□□□ -0.81
HMGB3P13-201ENST00000511263 MAP3K7O43318 606 aa9.98□□□□□ -0.81
HMGB3P13-201ENST00000511263 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
HMGB3P13-201ENST00000511263 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
HMGB3P13-201ENST00000511263 SPDYE16A6NNV3 312 aaPredicted RBP9.97□□□□□ -0.81
HMGB3P13-201ENST00000511263 PDIA6Q15084 440 aa9.97□□□□□ -0.81
HMGB3P13-201ENST00000511263 HPS5Q9UPZ3 1129 aa9.97□□□□□ -0.81
HMGB3P13-201ENST00000511263 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
HMGB3P13-201ENST00000511263 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.82
HMGB3P13-201ENST00000511263 LRCH3Q96II8 777 aa9.95□□□□□ -0.82
HMGB3P13-201ENST00000511263 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
HMGB3P13-201ENST00000511263 C3orf80F5H4A9 247 aa9.94□□□□□ -0.82
HMGB3P13-201ENST00000511263 SMAPO00193 183 aa9.94□□□□□ -0.82
HMGB3P13-201ENST00000511263 KCNC4Q03721 635 aa9.94□□□□□ -0.82
HMGB3P13-201ENST00000511263 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
HMGB3P13-201ENST00000511263 KCNV2Q8TDN2 545 aa9.93□□□□□ -0.82
HMGB3P13-201ENST00000511263 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
HMGB3P13-201ENST00000511263 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
HMGB3P13-201ENST00000511263 CDCA7LQ96GN5 454 aa9.9□□□□□ -0.82
HMGB3P13-201ENST00000511263 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
HMGB3P13-201ENST00000511263 SMYD5Q6GMV2 418 aa9.89□□□□□ -0.83
HMGB3P13-201ENST00000511263 SAMD7Q7Z3H4 446 aa9.89□□□□□ -0.83
HMGB3P13-201ENST00000511263 PRSS12P56730 875 aa9.88□□□□□ -0.83
HMGB3P13-201ENST00000511263 CDHR5Q9HBB8 845 aa9.87□□□□□ -0.83
HMGB3P13-201ENST00000511263 PPP4CP60510 307 aa9.86□□□□□ -0.83
HMGB3P13-201ENST00000511263 TJAP1Q5JTD0 557 aa9.85□□□□□ -0.83
HMGB3P13-201ENST00000511263 Q6ZNB5 142 aa9.84□□□□□ -0.83
HMGB3P13-201ENST00000511263 TATDN2Q93075 761 aa9.84□□□□□ -0.83
HMGB3P13-201ENST00000511263 BCANQ96GW7 911 aa9.84□□□□□ -0.83
HMGB3P13-201ENST00000511263 OSBPP22059 807 aa9.83□□□□□ -0.84
HMGB3P13-201ENST00000511263 PNMA3Q9UL41 463 aa9.83□□□□□ -0.84
HMGB3P13-201ENST00000511263 MTRQ99707 1265 aa9.81□□□□□ -0.84
HMGB3P13-201ENST00000511263 NBPF26B4DH59 902 aa9.8□□□□□ -0.84
HMGB3P13-201ENST00000511263 LCE2BO14633 110 aa9.8□□□□□ -0.84
HMGB3P13-201ENST00000511263 NUDT18Q6ZVK8 323 aa9.8□□□□□ -0.84
HMGB3P13-201ENST00000511263 CERKQ8TCT0 537 aa9.8□□□□□ -0.84
HMGB3P13-201ENST00000511263 ZNF516Q92618 1163 aa9.79□□□□□ -0.84
HMGB3P13-201ENST00000511263 RNF40O75150 1001 aa9.77□□□□□ -0.85
HMGB3P13-201ENST00000511263 APLP1P51693 650 aa9.77□□□□□ -0.85
HMGB3P13-201ENST00000511263 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
HMGB3P13-201ENST00000511263 NPDC1Q9NQX5 325 aaPredicted RBP9.76□□□□□ -0.85
HMGB3P13-201ENST00000511263 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
HMGB3P13-201ENST00000511263 PADI6Q6TGC4 694 aa9.75□□□□□ -0.85
HMGB3P13-201ENST00000511263 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
HMGB3P13-201ENST00000511263 GFRA3O60609 400 aa9.74□□□□□ -0.85
HMGB3P13-201ENST00000511263 TTC13Q8NBP0 860 aa9.74□□□□□ -0.85
HMGB3P13-201ENST00000511263 NKX2-3Q8TAU0 364 aa9.74□□□□□ -0.85
HMGB3P13-201ENST00000511263 TESPA1A2RU30 521 aaPredicted RBP9.73□□□□□ -0.85
HMGB3P13-201ENST00000511263 SEMA3EO15041 775 aa9.73□□□□□ -0.85
HMGB3P13-201ENST00000511263 RBM27Q9P2N5 1060 aaKnown RBP9.73□□□□□ -0.85
HMGB3P13-201ENST00000511263 SWT1Q5T5J6 900 aaKnown RBP9.72□□□□□ -0.85
HMGB3P13-201ENST00000511263 COPS2P61201 443 aa9.69□□□□□ -0.86
HMGB3P13-201ENST00000511263 LAPTM4AQ15012 233 aa9.69□□□□□ -0.86
HMGB3P13-201ENST00000511263 HDGFP51858 240 aaKnown RBP9.68□□□□□ -0.86
HMGB3P13-201ENST00000511263 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
HMGB3P13-201ENST00000511263 MLLT3P42568 568 aaPredicted RBP9.67□□□□□ -0.86
HMGB3P13-201ENST00000511263 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
HMGB3P13-201ENST00000511263 EYA1Q99502 592 aa9.67□□□□□ -0.86
HMGB3P13-201ENST00000511263 V9GY48 417 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms