RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MRPL50Q8N5N7 158 aaKnown RBP10.25□□□□□ -0.77
HMGB3P13-201ENST00000511263 GOLGA8CPA6NN73 597 aa10.24□□□□□ -0.77
HMGB3P13-201ENST00000511263 SLC24A1O60721 1099 aa10.24□□□□□ -0.77
HMGB3P13-201ENST00000511263 PROX2Q3B8N5 592 aa10.24□□□□□ -0.77
HMGB3P13-201ENST00000511263 TSHZ2Q9NRE2 1034 aa10.24□□□□□ -0.77
HMGB3P13-201ENST00000511263 COL9A1P20849 921 aa10.23□□□□□ -0.77
HMGB3P13-201ENST00000511263 NBPF3Q9H094 633 aa10.2□□□□□ -0.78
HMGB3P13-201ENST00000511263 PPP1R3GB7ZBB8 358 aa10.19□□□□□ -0.78
HMGB3P13-201ENST00000511263 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
HMGB3P13-201ENST00000511263 RABGEF1Q9UJ41 708 aa10.17□□□□□ -0.78
HMGB3P13-201ENST00000511263 PHF14O94880 888 aa10.16□□□□□ -0.78
HMGB3P13-201ENST00000511263 IFFO2Q5TF58 517 aa10.16□□□□□ -0.78
HMGB3P13-201ENST00000511263 DPYSL4O14531 572 aa10.15□□□□□ -0.78
HMGB3P13-201ENST00000511263 P3H3Q8IVL6 736 aa10.15□□□□□ -0.78
HMGB3P13-201ENST00000511263 A0A0G2JS52 829 aa10.14□□□□□ -0.79
HMGB3P13-201ENST00000511263 BCAMP50895 628 aa10.14□□□□□ -0.79
HMGB3P13-201ENST00000511263 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
HMGB3P13-201ENST00000511263 FBXW7Q969H0 707 aa10.14□□□□□ -0.79
HMGB3P13-201ENST00000511263 KIAA1468Q9P260 1216 aa10.12□□□□□ -0.79
HMGB3P13-201ENST00000511263 C6orf132Q5T0Z8 1188 aa10.11□□□□□ -0.79
HMGB3P13-201ENST00000511263 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
HMGB3P13-201ENST00000511263 E2F4Q16254 413 aa10.1□□□□□ -0.79
HMGB3P13-201ENST00000511263 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
HMGB3P13-201ENST00000511263 RBM33Q96EV2 1170 aaKnown RBP10.09□□□□□ -0.79
HMGB3P13-201ENST00000511263 DDX12PQ92771 950 aa10.08□□□□□ -0.8
HMGB3P13-201ENST00000511263 ZFRQ96KR1 1074 aaKnown RBP10.08□□□□□ -0.8
HMGB3P13-201ENST00000511263 SOWAHBA6NEL2 793 aa10.07□□□□□ -0.8
HMGB3P13-201ENST00000511263 RGS20O76081 388 aa10.07□□□□□ -0.8
HMGB3P13-201ENST00000511263 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
HMGB3P13-201ENST00000511263 EPAS1Q99814 870 aa10.07□□□□□ -0.8
HMGB3P13-201ENST00000511263 WBP1LQ9NX94 342 aa10.06□□□□□ -0.8
HMGB3P13-201ENST00000511263 TRIM6-TRIM34B2RNG4 842 aa10.05□□□□□ -0.8
HMGB3P13-201ENST00000511263 ITGBL1O95965 494 aaPredicted RBP10.05□□□□□ -0.8
HMGB3P13-201ENST00000511263 IRX2Q9BZI1 471 aaPredicted RBP10.04□□□□□ -0.8
HMGB3P13-201ENST00000511263 ONECUT3O60422 494 aaPredicted RBP10.02□□□□□ -0.81
HMGB3P13-201ENST00000511263 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.81
HMGB3P13-201ENST00000511263 KDM2AQ9Y2K7 1162 aa10.01□□□□□ -0.81
HMGB3P13-201ENST00000511263 NBR1Q14596 966 aa10□□□□□ -0.81
HMGB3P13-201ENST00000511263 FAM98CQ17RN3 349 aaKnown RBP10□□□□□ -0.81
HMGB3P13-201ENST00000511263 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
HMGB3P13-201ENST00000511263 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
HMGB3P13-201ENST00000511263 ARIH1Q9Y4X5 557 aaPredicted RBP9.99□□□□□ -0.81
HMGB3P13-201ENST00000511263 MAP3K7O43318 606 aa9.98□□□□□ -0.81
HMGB3P13-201ENST00000511263 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
HMGB3P13-201ENST00000511263 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
HMGB3P13-201ENST00000511263 SPDYE16A6NNV3 312 aaPredicted RBP9.97□□□□□ -0.81
HMGB3P13-201ENST00000511263 PDIA6Q15084 440 aa9.97□□□□□ -0.81
HMGB3P13-201ENST00000511263 HPS5Q9UPZ3 1129 aa9.97□□□□□ -0.81
HMGB3P13-201ENST00000511263 NYAP1Q6ZVC0 841 aa9.96□□□□□ -0.82
HMGB3P13-201ENST00000511263 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.82
HMGB3P13-201ENST00000511263 LRCH3Q96II8 777 aa9.95□□□□□ -0.82
HMGB3P13-201ENST00000511263 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
HMGB3P13-201ENST00000511263 C3orf80F5H4A9 247 aa9.94□□□□□ -0.82
HMGB3P13-201ENST00000511263 SMAPO00193 183 aa9.94□□□□□ -0.82
HMGB3P13-201ENST00000511263 KCNC4Q03721 635 aa9.94□□□□□ -0.82
HMGB3P13-201ENST00000511263 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
HMGB3P13-201ENST00000511263 KCNV2Q8TDN2 545 aa9.93□□□□□ -0.82
HMGB3P13-201ENST00000511263 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
HMGB3P13-201ENST00000511263 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
HMGB3P13-201ENST00000511263 CDCA7LQ96GN5 454 aa9.9□□□□□ -0.82
HMGB3P13-201ENST00000511263 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
HMGB3P13-201ENST00000511263 SMYD5Q6GMV2 418 aa9.89□□□□□ -0.83
HMGB3P13-201ENST00000511263 SAMD7Q7Z3H4 446 aa9.89□□□□□ -0.83
HMGB3P13-201ENST00000511263 PRSS12P56730 875 aa9.88□□□□□ -0.83
HMGB3P13-201ENST00000511263 CDHR5Q9HBB8 845 aa9.87□□□□□ -0.83
HMGB3P13-201ENST00000511263 PPP4CP60510 307 aa9.86□□□□□ -0.83
HMGB3P13-201ENST00000511263 TJAP1Q5JTD0 557 aa9.85□□□□□ -0.83
HMGB3P13-201ENST00000511263 Q6ZNB5 142 aa9.84□□□□□ -0.83
HMGB3P13-201ENST00000511263 TATDN2Q93075 761 aa9.84□□□□□ -0.83
HMGB3P13-201ENST00000511263 BCANQ96GW7 911 aa9.84□□□□□ -0.83
HMGB3P13-201ENST00000511263 OSBPP22059 807 aa9.83□□□□□ -0.84
HMGB3P13-201ENST00000511263 PNMA3Q9UL41 463 aa9.83□□□□□ -0.84
HMGB3P13-201ENST00000511263 MTRQ99707 1265 aa9.81□□□□□ -0.84
HMGB3P13-201ENST00000511263 NBPF26B4DH59 902 aa9.8□□□□□ -0.84
HMGB3P13-201ENST00000511263 LCE2BO14633 110 aa9.8□□□□□ -0.84
HMGB3P13-201ENST00000511263 NUDT18Q6ZVK8 323 aa9.8□□□□□ -0.84
HMGB3P13-201ENST00000511263 CERKQ8TCT0 537 aa9.8□□□□□ -0.84
HMGB3P13-201ENST00000511263 ZNF516Q92618 1163 aa9.79□□□□□ -0.84
HMGB3P13-201ENST00000511263 RNF40O75150 1001 aa9.77□□□□□ -0.85
HMGB3P13-201ENST00000511263 APLP1P51693 650 aa9.77□□□□□ -0.85
HMGB3P13-201ENST00000511263 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
HMGB3P13-201ENST00000511263 NPDC1Q9NQX5 325 aaPredicted RBP9.76□□□□□ -0.85
HMGB3P13-201ENST00000511263 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
HMGB3P13-201ENST00000511263 PADI6Q6TGC4 694 aa9.75□□□□□ -0.85
HMGB3P13-201ENST00000511263 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
HMGB3P13-201ENST00000511263 GFRA3O60609 400 aa9.74□□□□□ -0.85
HMGB3P13-201ENST00000511263 TTC13Q8NBP0 860 aa9.74□□□□□ -0.85
HMGB3P13-201ENST00000511263 NKX2-3Q8TAU0 364 aa9.74□□□□□ -0.85
HMGB3P13-201ENST00000511263 TESPA1A2RU30 521 aaPredicted RBP9.73□□□□□ -0.85
HMGB3P13-201ENST00000511263 SEMA3EO15041 775 aa9.73□□□□□ -0.85
HMGB3P13-201ENST00000511263 RBM27Q9P2N5 1060 aaKnown RBP9.73□□□□□ -0.85
HMGB3P13-201ENST00000511263 SWT1Q5T5J6 900 aaKnown RBP9.72□□□□□ -0.85
HMGB3P13-201ENST00000511263 COPS2P61201 443 aa9.69□□□□□ -0.86
HMGB3P13-201ENST00000511263 LAPTM4AQ15012 233 aa9.69□□□□□ -0.86
HMGB3P13-201ENST00000511263 HDGFP51858 240 aaKnown RBP9.68□□□□□ -0.86
HMGB3P13-201ENST00000511263 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
HMGB3P13-201ENST00000511263 MLLT3P42568 568 aaPredicted RBP9.67□□□□□ -0.86
HMGB3P13-201ENST00000511263 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
HMGB3P13-201ENST00000511263 EYA1Q99502 592 aa9.67□□□□□ -0.86
HMGB3P13-201ENST00000511263 V9GY48 417 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms