RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 SCRIBQ14160 1630 aa14.77□□□□□ -0.04
LINC01088-207ENST00000511241 ZNF454Q8N9F8 522 aa14.77□□□□□ -0.05
LINC01088-207ENST00000511241 ZDHHC16Q969W1 377 aa14.77□□□□□ -0.05
LINC01088-207ENST00000511241 GNPATO15228 680 aa14.75□□□□□ -0.05
LINC01088-207ENST00000511241 PTGDRQ13258 359 aa14.75□□□□□ -0.05
LINC01088-207ENST00000511241 RBM33Q96EV2 1170 aaKnown RBP14.75□□□□□ -0.05
LINC01088-207ENST00000511241 LHX6Q9UPM6 363 aa14.75□□□□□ -0.05
LINC01088-207ENST00000511241 AK7Q96M32 723 aa14.74□□□□□ -0.05
LINC01088-207ENST00000511241 MINK1Q8N4C8 1332 aaPredicted RBP14.71□□□□□ -0.05
LINC01088-207ENST00000511241 PPP4R3BQ5MIZ7 849 aa14.71□□□□□ -0.05
LINC01088-207ENST00000511241 CERKQ8TCT0 537 aa14.7□□□□□ -0.06
LINC01088-207ENST00000511241 MAP2K5Q13163 448 aa14.69□□□□□ -0.06
LINC01088-207ENST00000511241 C6orf132Q5T0Z8 1188 aa14.69□□□□□ -0.06
LINC01088-207ENST00000511241 NPDC1Q9NQX5 325 aaPredicted RBP14.69□□□□□ -0.06
LINC01088-207ENST00000511241 TSR1Q2NL82 804 aaKnown RBP14.68□□□□□ -0.06
LINC01088-207ENST00000511241 CDHR5Q9HBB8 845 aa14.68□□□□□ -0.06
LINC01088-207ENST00000511241 ADAM33Q9BZ11 813 aa14.67□□□□□ -0.06
LINC01088-207ENST00000511241 IRF6O14896 467 aa14.63□□□□□ -0.07
LINC01088-207ENST00000511241 BCL2L12Q9HB09 334 aa14.63□□□□□ -0.07
LINC01088-207ENST00000511241 FECHP22830 423 aa14.61□□□□□ -0.07
LINC01088-207ENST00000511241 BRPF1P55201 1214 aaPredicted RBP14.6□□□□□ -0.07
LINC01088-207ENST00000511241 SHROOM4Q9ULL8 1493 aa14.59□□□□□ -0.07
LINC01088-207ENST00000511241 TRIM66O15016 1216 aa14.59□□□□□ -0.07
LINC01088-207ENST00000511241 CCDC102AQ96A19 550 aa14.59□□□□□ -0.07
LINC01088-207ENST00000511241 RBM27Q9P2N5 1060 aaKnown RBP14.58□□□□□ -0.08
LINC01088-207ENST00000511241 ST18O60284 1047 aa14.57□□□□□ -0.08
LINC01088-207ENST00000511241 PTPREP23469 700 aa14.57□□□□□ -0.08
LINC01088-207ENST00000511241 NEUROD2Q15784 382 aa14.57□□□□□ -0.08
LINC01088-207ENST00000511241 CC2D2AQ9P2K1 1620 aa14.56□□□□□ -0.08
LINC01088-207ENST00000511241 ERBB3P21860 1342 aa14.54□□□□□ -0.08
LINC01088-207ENST00000511241 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
LINC01088-207ENST00000511241 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
LINC01088-207ENST00000511241 PRSS12P56730 875 aa14.53□□□□□ -0.08
LINC01088-207ENST00000511241 PDE4DQ08499 809 aa14.53□□□□□ -0.08
LINC01088-207ENST00000511241 PPP1R3GB7ZBB8 358 aa14.52□□□□□ -0.09
LINC01088-207ENST00000511241 AMHR2Q16671 573 aa14.51□□□□□ -0.09
LINC01088-207ENST00000511241 PADI6Q6TGC4 694 aa14.51□□□□□ -0.09
LINC01088-207ENST00000511241 TTC13Q8NBP0 860 aa14.51□□□□□ -0.09
LINC01088-207ENST00000511241 KCNH8Q96L42 1107 aa14.51□□□□□ -0.09
LINC01088-207ENST00000511241 EMP3P54852 163 aa14.5□□□□□ -0.09
LINC01088-207ENST00000511241 CDCA7LQ96GN5 454 aa14.5□□□□□ -0.09
LINC01088-207ENST00000511241 COL9A1P20849 921 aa14.49□□□□□ -0.09
LINC01088-207ENST00000511241 FAM163AQ96GL9 167 aaPredicted RBP14.49□□□□□ -0.09
LINC01088-207ENST00000511241 OATP04181 439 aa14.48□□□□□ -0.09
LINC01088-207ENST00000511241 VARS2Q5ST30 1063 aaKnown RBP14.48□□□□□ -0.09
LINC01088-207ENST00000511241 TMEM132AQ24JP5 1023 aa14.46□□□□□ -0.09
LINC01088-207ENST00000511241 DAXXQ9UER7 740 aaPredicted RBP14.45□□□□□ -0.1
LINC01088-207ENST00000511241 ONECUT3O60422 494 aaPredicted RBP14.44□□□□□ -0.1
LINC01088-207ENST00000511241 MARVELD3Q96A59 401 aa14.44□□□□□ -0.1
LINC01088-207ENST00000511241 KCNK17Q96T54 332 aa14.44□□□□□ -0.1
LINC01088-207ENST00000511241 ADGRG1Q9Y653 693 aa14.44□□□□□ -0.1
LINC01088-207ENST00000511241 ARHGAP33O14559 1287 aa14.42□□□□□ -0.1
LINC01088-207ENST00000511241 KDM4CQ9H3R0 1056 aa14.42□□□□□ -0.1
LINC01088-207ENST00000511241 GPBP1L1Q9HC44 474 aaPredicted RBP14.42□□□□□ -0.1
LINC01088-207ENST00000511241 PBX2P40425 430 aa14.41□□□□□ -0.1
LINC01088-207ENST00000511241 METTL3Q86U44 580 aaKnown RBP14.41□□□□□ -0.1
LINC01088-207ENST00000511241 ZNF687Q8N1G0 1237 aa14.41□□□□□ -0.1
LINC01088-207ENST00000511241 FAM205CA6NFA0 338 aa14.4□□□□□ -0.1
LINC01088-207ENST00000511241 TRIM6-TRIM34B2RNG4 842 aa14.4□□□□□ -0.1
LINC01088-207ENST00000511241 RBM46Q8TBY0 533 aaKnown RBP14.4□□□□□ -0.1
LINC01088-207ENST00000511241 PXYLP1Q8TE99 480 aa14.4□□□□□ -0.1
LINC01088-207ENST00000511241 PACS2Q86VP3 889 aa14.39□□□□□ -0.11
LINC01088-207ENST00000511241 TSKSQ9UJT2 592 aa14.39□□□□□ -0.11
LINC01088-207ENST00000511241 TTLL12Q14166 644 aaPredicted RBP14.38□□□□□ -0.11
LINC01088-207ENST00000511241 PARP9Q8IXQ6 854 aa14.38□□□□□ -0.11
LINC01088-207ENST00000511241 FAM198AQ9UFP1 575 aa14.38□□□□□ -0.11
LINC01088-207ENST00000511241 CLCN1P35523 988 aa14.37□□□□□ -0.11
LINC01088-207ENST00000511241 FAM161AQ3B820 660 aa14.37□□□□□ -0.11
LINC01088-207ENST00000511241 ZBED2Q9BTP6 218 aa14.37□□□□□ -0.11
LINC01088-207ENST00000511241 SLC4A5Q9BY07 1137 aa14.37□□□□□ -0.11
LINC01088-207ENST00000511241 NBPF26B4DH59 902 aa14.36□□□□□ -0.11
LINC01088-207ENST00000511241 PSEN2P49810 448 aa14.36□□□□□ -0.11
LINC01088-207ENST00000511241 PHOX2BQ99453 314 aa14.35□□□□□ -0.11
LINC01088-207ENST00000511241 POTEEQ6S8J3 1075 aa14.34□□□□□ -0.11
LINC01088-207ENST00000511241 HS3ST6Q96QI5 342 aa14.34□□□□□ -0.11
LINC01088-207ENST00000511241 GPCPD1Q9NPB8 672 aa14.34□□□□□ -0.11
LINC01088-207ENST00000511241 EYA1Q99502 592 aa14.33□□□□□ -0.12
LINC01088-207ENST00000511241 TMUB1Q9BVT8 246 aa14.33□□□□□ -0.12
LINC01088-207ENST00000511241 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.32□□□□□ -0.12
LINC01088-207ENST00000511241 PROX2Q3B8N5 592 aa14.32□□□□□ -0.12
LINC01088-207ENST00000511241 LCE2DQ5TA82 110 aaPredicted RBP14.32□□□□□ -0.12
LINC01088-207ENST00000511241 TATDN2Q93075 761 aa14.32□□□□□ -0.12
LINC01088-207ENST00000511241 MDM2Q00987 491 aaPredicted RBP14.31□□□□□ -0.12
LINC01088-207ENST00000511241 GIGYF2Q6Y7W6 1299 aaKnown RBP14.31□□□□□ -0.12
LINC01088-207ENST00000511241 NUDT18Q6ZVK8 323 aa14.31□□□□□ -0.12
LINC01088-207ENST00000511241 PNMA3Q9UL41 463 aa14.31□□□□□ -0.12
LINC01088-207ENST00000511241 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
LINC01088-207ENST00000511241 DDRGK1Q96HY6 314 aa14.29□□□□□ -0.12
LINC01088-207ENST00000511241 KIAA1468Q9P260 1216 aa14.29□□□□□ -0.12
LINC01088-207ENST00000511241 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
LINC01088-207ENST00000511241 POTEB3A0JP26 581 aa14.28□□□□□ -0.12
LINC01088-207ENST00000511241 DMRTA1Q5VZB9 504 aa14.28□□□□□ -0.12
LINC01088-207ENST00000511241 POTEBQ6S5H4 581 aa14.28□□□□□ -0.12
LINC01088-207ENST00000511241 REPIN1Q9BWE0 567 aaKnown RBP14.28□□□□□ -0.12
LINC01088-207ENST00000511241 RCCD1A6NED2 376 aa14.27□□□□□ -0.13
LINC01088-207ENST00000511241 DNAJB2P25686 324 aa14.26□□□□□ -0.13
LINC01088-207ENST00000511241 IL27Q8NEV9 243 aa14.26□□□□□ -0.13
LINC01088-207ENST00000511241 FAM117AQ9C073 453 aa14.25□□□□□ -0.13
LINC01088-207ENST00000511241 C3orf80F5H4A9 247 aa14.24□□□□□ -0.13
LINC01088-207ENST00000511241 TK2O00142 265 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms