RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 FYCO1Q9BQS8 1478 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 CTTNBP2Q8WZ74 1663 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 RPRD2Q5VT52 1461 aaKnown RBP4.13□□□□□ -1.75
CLOCK-209ENST00000511124 CASKIN1Q8WXD9 1431 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 HECW2Q9P2P5 1572 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 HNRNPMP52272 730 aaKnown RBP eCLIP4.13□□□□□ -1.75
CLOCK-209ENST00000511124 ZRANB1Q9UGI0 708 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 FER1L4A9Z1Z3 1794 aa4.13□□□□□ -1.75
CLOCK-209ENST00000511124 ZMYM3Q14202 1370 aa4.12□□□□□ -1.75
CLOCK-209ENST00000511124 LRRC9Q6ZRR7 1453 aa4.12□□□□□ -1.75
CLOCK-209ENST00000511124 AGLP35573 1532 aa4.12□□□□□ -1.75
CLOCK-209ENST00000511124 NLRP1Q9C000 1473 aa4.12□□□□□ -1.75
CLOCK-209ENST00000511124 CCDC9Q9Y3X0 531 aaKnown RBP4.12□□□□□ -1.75
CLOCK-209ENST00000511124 EIF3AQ14152 1382 aaKnown RBP4.12□□□□□ -1.75
CLOCK-209ENST00000511124 A2MP01023 1474 aa4.12□□□□□ -1.75
CLOCK-209ENST00000511124 NCOA2Q15596 1464 aa4.12□□□□□ -1.75
CLOCK-209ENST00000511124 MLH3Q9UHC1 1453 aa4.12□□□□□ -1.75
CLOCK-209ENST00000511124 VGFO15240 615 aaPredicted RBP4.12□□□□□ -1.75
CLOCK-209ENST00000511124 CCDC125Q86Z20 511 aa4.12□□□□□ -1.75
CLOCK-209ENST00000511124 MYOM3Q5VTT5 1437 aa4.12□□□□□ -1.75
CLOCK-209ENST00000511124 DHX29Q7Z478 1369 aaKnown RBP4.11□□□□□ -1.75
CLOCK-209ENST00000511124 CPS1P31327 1500 aa4.11□□□□□ -1.75
CLOCK-209ENST00000511124 ARHGEF40Q8TER5 1519 aa4.11□□□□□ -1.75
CLOCK-209ENST00000511124 STAC3Q96MF2 364 aa4.11□□□□□ -1.75
CLOCK-209ENST00000511124 NUTM2BA6NNL0 878 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-209ENST00000511124 NUTM2EB1AL46 878 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-209ENST00000511124 NUTM2DQ5VT03 806 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-209ENST00000511124 NUTM2AQ8IVF1 878 aaPredicted RBP4.11□□□□□ -1.75
CLOCK-209ENST00000511124 ABCA9Q8IUA7 1624 aa4.11□□□□□ -1.75
CLOCK-209ENST00000511124 LRRC59Q96AG4 307 aaKnown RBP4.11□□□□□ -1.75
CLOCK-209ENST00000511124 CEBPAP49715 358 aaPredicted RBP4.1□□□□□ -1.75
CLOCK-209ENST00000511124 AMER1Q5JTC6 1135 aaPredicted RBP4.1□□□□□ -1.75
CLOCK-209ENST00000511124 KCNA6P17658 529 aa4.1□□□□□ -1.75
CLOCK-209ENST00000511124 SPATA31A6Q5VVP1 1343 aa4.1□□□□□ -1.75
CLOCK-209ENST00000511124 PLA2R1Q13018 1463 aa4.1□□□□□ -1.75
CLOCK-209ENST00000511124 RXRBP28702 533 aa4.1□□□□□ -1.75
CLOCK-209ENST00000511124 NBPF8Q3BBV2 869 aa4.1□□□□□ -1.75
CLOCK-209ENST00000511124 NBPF14Q5TI25 921 aa4.1□□□□□ -1.75
CLOCK-209ENST00000511124 NCKAP5LQ9HCH0 1330 aa4.09□□□□□ -1.75
CLOCK-209ENST00000511124 CCDC141Q6ZP82 1450 aa4.09□□□□□ -1.75
CLOCK-209ENST00000511124 A2ML1A8K2U0 1454 aa4.09□□□□□ -1.75
CLOCK-209ENST00000511124 NPHP4O75161 1426 aaPredicted RBP4.09□□□□□ -1.76
CLOCK-209ENST00000511124 BAG6P46379 1132 aa4.08□□□□□ -1.76
CLOCK-209ENST00000511124 MKRN4PQ13434 485 aaPredicted RBP4.08□□□□□ -1.76
CLOCK-209ENST00000511124 ZMYM4Q5VZL5 1548 aa4.08□□□□□ -1.76
CLOCK-209ENST00000511124 EHBP1L1Q8N3D4 1523 aa4.08□□□□□ -1.76
CLOCK-209ENST00000511124 JCADQ9P266 1359 aa4.08□□□□□ -1.76
CLOCK-209ENST00000511124 C19orf44Q9H6X5 657 aa4.08□□□□□ -1.76
CLOCK-209ENST00000511124 POGKQ9P215 609 aa4.08□□□□□ -1.76
CLOCK-209ENST00000511124 ARHGAP35Q9NRY4 1499 aa4.08□□□□□ -1.76
CLOCK-209ENST00000511124 MIA2Q96PC5 1412 aa4.08□□□□□ -1.76
CLOCK-209ENST00000511124 PPP1R1BQ9UD71 204 aaPredicted RBP4.08□□□□□ -1.76
CLOCK-209ENST00000511124 RPGRIP1LQ68CZ1 1315 aa4.07□□□□□ -1.76
CLOCK-209ENST00000511124 LMOD2Q6P5Q4 547 aa4.07□□□□□ -1.76
CLOCK-209ENST00000511124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.07□□□□□ -1.76
CLOCK-209ENST00000511124 NUP153P49790 1475 aaKnown RBP4.07□□□□□ -1.76
CLOCK-209ENST00000511124 RIMS1Q86UR5 1692 aaKnown RBP4.07□□□□□ -1.76
CLOCK-209ENST00000511124 TBX22Q9Y458 520 aa4.07□□□□□ -1.76
CLOCK-209ENST00000511124 TRPC5Q9UL62 973 aaPredicted RBP4.06□□□□□ -1.76
CLOCK-209ENST00000511124 PIK3R4Q99570 1358 aa4.06□□□□□ -1.76
CLOCK-209ENST00000511124 NPM2Q86SE8 214 aaKnown RBP4.06□□□□□ -1.76
CLOCK-209ENST00000511124 GPRASP1Q5JY77 1395 aa4.06□□□□□ -1.76
CLOCK-209ENST00000511124 KDM5DQ9BY66 1539 aa4.06□□□□□ -1.76
CLOCK-209ENST00000511124 MYO5CQ9NQX4 1742 aa4.06□□□□□ -1.76
CLOCK-209ENST00000511124 COL17A1Q9UMD9 1497 aaPredicted RBP4.06□□□□□ -1.76
CLOCK-209ENST00000511124 NCOA1Q15788 1441 aa4.06□□□□□ -1.76
CLOCK-209ENST00000511124 RBM6P78332 1123 aaKnown RBP4.06□□□□□ -1.76
CLOCK-209ENST00000511124 TTC37Q6PGP7 1564 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 NCOA3Q9Y6Q9 1424 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 NPHP3Q7Z494 1330 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 ATAD2Q6PL18 1390 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 KIF15Q9NS87 1388 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 RRP7BPQ9NSQ0 103 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 ITSN2Q9NZM3 1697 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 MYCNP04198 464 aaPredicted RBP4.05□□□□□ -1.76
CLOCK-209ENST00000511124 ITGAEP38570 1179 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 EVA1CP58658 441 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 BCORL1Q5H9F3 1711 aa4.05□□□□□ -1.76
CLOCK-209ENST00000511124 WASHC2AQ641Q2 1341 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 SETD5Q9C0A6 1442 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 SPATA31D1Q6ZQQ2 1576 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 SHANK2Q9UPX8 1470 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 PREX1Q8TCU6 1659 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 REREQ9P2R6 1566 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 ATP7AQ04656 1500 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 HSPA1LP34931 641 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 SLAIN2Q9P270 581 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 MADDQ8WXG6 1647 aa4.04□□□□□ -1.76
CLOCK-209ENST00000511124 CHIC2Q9UKJ5 165 aa4.03□□□□□ -1.76
CLOCK-209ENST00000511124 ZNF335Q9H4Z2 1342 aaPredicted RBP4.03□□□□□ -1.76
CLOCK-209ENST00000511124 SCAF11Q99590 1463 aaKnown RBP4.03□□□□□ -1.76
CLOCK-209ENST00000511124 PDE3BQ13370 1112 aa4.03□□□□□ -1.76
CLOCK-209ENST00000511124 ARHGEF12Q9NZN5 1544 aa4.03□□□□□ -1.76
CLOCK-209ENST00000511124 SAMD9Q5K651 1589 aa4.03□□□□□ -1.76
CLOCK-209ENST00000511124 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.02□□□□□ -1.77
CLOCK-209ENST00000511124 ZNF142P52746 1687 aaPredicted RBP4.02□□□□□ -1.77
CLOCK-209ENST00000511124 NGDNQ8NEJ9 315 aaKnown RBP4.02□□□□□ -1.77
CLOCK-209ENST00000511124 PZPP20742 1482 aa4.02□□□□□ -1.77
CLOCK-209ENST00000511124 UGGT1Q9NYU2 1555 aa4.02□□□□□ -1.77
CLOCK-209ENST00000511124 VPS8Q8N3P4 1428 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms