RNA–Protein interactions for RNA: ENST00000510227.1

ZCCHC9-209, Transcript of zinc finger CCHC-type containing 9, humanhuman

TSL 2

Gene ZCCHC9, Length 870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-209ENST00000510227 LAPTM4BQ86VI4 370 aa12.3□□□□□ -0.44
ZCCHC9-209ENST00000510227 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
ZCCHC9-209ENST00000510227 NYAP1Q6ZVC0 841 aa12.29□□□□□ -0.44
ZCCHC9-209ENST00000510227 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
ZCCHC9-209ENST00000510227 MFSD10Q14728 455 aa12.26□□□□□ -0.45
ZCCHC9-209ENST00000510227 FBXW7Q969H0 707 aa12.26□□□□□ -0.45
ZCCHC9-209ENST00000510227 TYW1BQ6NUM6 668 aa12.25□□□□□ -0.45
ZCCHC9-209ENST00000510227 ZFRQ96KR1 1074 aaKnown RBP12.25□□□□□ -0.45
ZCCHC9-209ENST00000510227 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
ZCCHC9-209ENST00000510227 KCNC4Q03721 635 aa12.24□□□□□ -0.45
ZCCHC9-209ENST00000510227 WBP1LQ9NX94 342 aa12.24□□□□□ -0.45
ZCCHC9-209ENST00000510227 KIAA1468Q9P260 1216 aa12.24□□□□□ -0.45
ZCCHC9-209ENST00000510227 PHF14O94880 888 aa12.22□□□□□ -0.45
ZCCHC9-209ENST00000510227 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
ZCCHC9-209ENST00000510227 SEPT9Q9UHD8 586 aaPredicted RBP12.19□□□□□ -0.46
ZCCHC9-209ENST00000510227 LAPTM4AQ15012 233 aa12.18□□□□□ -0.46
ZCCHC9-209ENST00000510227 GTPBP6O43824 516 aaPredicted RBP12.17□□□□□ -0.46
ZCCHC9-209ENST00000510227 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.46
ZCCHC9-209ENST00000510227 TRIM6-TRIM34B2RNG4 842 aa12.14□□□□□ -0.47
ZCCHC9-209ENST00000510227 C6orf132Q5T0Z8 1188 aa12.14□□□□□ -0.47
ZCCHC9-209ENST00000510227 TSR3Q9UJK0 312 aaKnown RBP12.14□□□□□ -0.47
ZCCHC9-209ENST00000510227 LCE2BO14633 110 aa12.13□□□□□ -0.47
ZCCHC9-209ENST00000510227 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.13□□□□□ -0.47
ZCCHC9-209ENST00000510227 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
ZCCHC9-209ENST00000510227 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
ZCCHC9-209ENST00000510227 EPAS1Q99814 870 aa12.12□□□□□ -0.47
ZCCHC9-209ENST00000510227 GFRA3O60609 400 aa12.09□□□□□ -0.47
ZCCHC9-209ENST00000510227 TRAF7Q6Q0C0 670 aa12.08□□□□□ -0.48
ZCCHC9-209ENST00000510227 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
ZCCHC9-209ENST00000510227 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
ZCCHC9-209ENST00000510227 CAMK2BQ13554 666 aa12.03□□□□□ -0.48
ZCCHC9-209ENST00000510227 DPYSL4O14531 572 aa12.02□□□□□ -0.49
ZCCHC9-209ENST00000510227 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
ZCCHC9-209ENST00000510227 NRG2O14511 850 aaPredicted RBP12□□□□□ -0.49
ZCCHC9-209ENST00000510227 PPP4CP60510 307 aa12□□□□□ -0.49
ZCCHC9-209ENST00000510227 TJAP1Q5JTD0 557 aa12□□□□□ -0.49
ZCCHC9-209ENST00000510227 PACS2Q86VP3 889 aa11.99□□□□□ -0.49
ZCCHC9-209ENST00000510227 TSKSQ9UJT2 592 aa11.99□□□□□ -0.49
ZCCHC9-209ENST00000510227 DDX12PQ92771 950 aa11.98□□□□□ -0.49
ZCCHC9-209ENST00000510227 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
ZCCHC9-209ENST00000510227 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
ZCCHC9-209ENST00000510227 MTRQ99707 1265 aa11.94□□□□□ -0.5
ZCCHC9-209ENST00000510227 V9GY48 417 aaPredicted RBP11.94□□□□□ -0.5
ZCCHC9-209ENST00000510227 PPP1R18Q6NYC8 613 aa11.93□□□□□ -0.5
ZCCHC9-209ENST00000510227 SAMD7Q7Z3H4 446 aa11.93□□□□□ -0.5
ZCCHC9-209ENST00000510227 IL21Q9HBE4 155 aa11.93□□□□□ -0.5
ZCCHC9-209ENST00000510227 MAP3K7O43318 606 aa11.92□□□□□ -0.5
ZCCHC9-209ENST00000510227 NBR1Q14596 966 aa11.92□□□□□ -0.5
ZCCHC9-209ENST00000510227 SMAPO00193 183 aa11.9□□□□□ -0.5
ZCCHC9-209ENST00000510227 CDCA7LQ96GN5 454 aa11.88□□□□□ -0.51
ZCCHC9-209ENST00000510227 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.87□□□□□ -0.51
ZCCHC9-209ENST00000510227 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
ZCCHC9-209ENST00000510227 PRSS12P56730 875 aa11.86□□□□□ -0.51
ZCCHC9-209ENST00000510227 ZNF516Q92618 1163 aa11.86□□□□□ -0.51
ZCCHC9-209ENST00000510227 PDIA6Q15084 440 aa11.85□□□□□ -0.51
ZCCHC9-209ENST00000510227 ZNF787Q6DD87 383 aa11.85□□□□□ -0.51
ZCCHC9-209ENST00000510227 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
ZCCHC9-209ENST00000510227 NBPF26B4DH59 902 aa11.83□□□□□ -0.52
ZCCHC9-209ENST00000510227 C3orf80F5H4A9 247 aa11.83□□□□□ -0.52
ZCCHC9-209ENST00000510227 CERKQ8TCT0 537 aa11.82□□□□□ -0.52
ZCCHC9-209ENST00000510227 TATDN2Q93075 761 aa11.82□□□□□ -0.52
ZCCHC9-209ENST00000510227 APLP1P51693 650 aa11.81□□□□□ -0.52
ZCCHC9-209ENST00000510227 PNMA3Q9UL41 463 aa11.81□□□□□ -0.52
ZCCHC9-209ENST00000510227 RNF40O75150 1001 aa11.79□□□□□ -0.52
ZCCHC9-209ENST00000510227 NKX2-3Q8TAU0 364 aa11.79□□□□□ -0.52
ZCCHC9-209ENST00000510227 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
ZCCHC9-209ENST00000510227 DCAF8L2P0C7V8 631 aa11.78□□□□□ -0.52
ZCCHC9-209ENST00000510227 PRIM1P49642 420 aaKnown RBP11.77□□□□□ -0.53
ZCCHC9-209ENST00000510227 ZNF775Q96BV0 537 aaPredicted RBP11.77□□□□□ -0.53
ZCCHC9-209ENST00000510227 GGCXP38435 758 aa11.76□□□□□ -0.53
ZCCHC9-209ENST00000510227 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
ZCCHC9-209ENST00000510227 NUDT18Q6ZVK8 323 aa11.74□□□□□ -0.53
ZCCHC9-209ENST00000510227 ZCCHC6Q5VYS8 1495 aaKnown RBP11.74□□□□□ -0.53
ZCCHC9-209ENST00000510227 ABCC9O60706 1549 aa11.74□□□□□ -0.53
ZCCHC9-209ENST00000510227 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
ZCCHC9-209ENST00000510227 COPS2P61201 443 aa11.72□□□□□ -0.53
ZCCHC9-209ENST00000510227 TMUB1Q9BVT8 246 aa11.72□□□□□ -0.53
ZCCHC9-209ENST00000510227 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
ZCCHC9-209ENST00000510227 CDHR5Q9HBB8 845 aa11.7□□□□□ -0.54
ZCCHC9-209ENST00000510227 DCAF1Q9Y4B6 1507 aa11.7□□□□□ -0.54
ZCCHC9-209ENST00000510227 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
ZCCHC9-209ENST00000510227 TRIM67Q6ZTA4 783 aa11.68□□□□□ -0.54
ZCCHC9-209ENST00000510227 SWT1Q5T5J6 900 aaKnown RBP11.67□□□□□ -0.54
ZCCHC9-209ENST00000510227 SLF2Q8IX21 1173 aa11.67□□□□□ -0.54
ZCCHC9-209ENST00000510227 MYO15BQ96JP2 1530 aa11.66□□□□□ -0.54
ZCCHC9-209ENST00000510227 ZPR1O75312 459 aa11.66□□□□□ -0.54
ZCCHC9-209ENST00000510227 OSBPP22059 807 aa11.64□□□□□ -0.55
ZCCHC9-209ENST00000510227 TTC13Q8NBP0 860 aa11.64□□□□□ -0.55
ZCCHC9-209ENST00000510227 SLC19A1P41440 591 aa11.63□□□□□ -0.55
ZCCHC9-209ENST00000510227 ARIH1Q9Y4X5 557 aaPredicted RBP11.63□□□□□ -0.55
ZCCHC9-209ENST00000510227 PKDCCQ504Y2 493 aa11.62□□□□□ -0.55
ZCCHC9-209ENST00000510227 RNF223E7ERA6 249 aa11.61□□□□□ -0.55
ZCCHC9-209ENST00000510227 MYT1Q01538 1121 aa11.61□□□□□ -0.55
ZCCHC9-209ENST00000510227 E2F4Q16254 413 aa11.61□□□□□ -0.55
ZCCHC9-209ENST00000510227 EMID1Q96A84 441 aaPredicted RBP11.61□□□□□ -0.55
ZCCHC9-209ENST00000510227 DGAT1O75907 488 aa11.6□□□□□ -0.55
ZCCHC9-209ENST00000510227 PADI6Q6TGC4 694 aa11.6□□□□□ -0.55
ZCCHC9-209ENST00000510227 NACADO15069 1562 aa11.59□□□□□ -0.55
ZCCHC9-209ENST00000510227 SLC4A3P48751 1232 aa11.59□□□□□ -0.55
ZCCHC9-209ENST00000510227 PRR14Q9BWN1 585 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms