RNA–Protein interactions for RNA: ENST00000510131.1

ARHGEF28-209, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5

Gene ARHGEF28, Length 280 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-209ENST00000510131 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
ARHGEF28-209ENST00000510131 PLA2G2EQ9NZK7 142 aa12.1□□□□□ -0.47
ARHGEF28-209ENST00000510131 GOLGA8CPA6NN73 597 aa12.08□□□□□ -0.48
ARHGEF28-209ENST00000510131 PROX2Q3B8N5 592 aa12.07□□□□□ -0.48
ARHGEF28-209ENST00000510131 DDX12PQ92771 950 aa12.07□□□□□ -0.48
ARHGEF28-209ENST00000510131 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
ARHGEF28-209ENST00000510131 PTPN5P54829 565 aa12.06□□□□□ -0.48
ARHGEF28-209ENST00000510131 C6orf132Q5T0Z8 1188 aa12.06□□□□□ -0.48
ARHGEF28-209ENST00000510131 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
ARHGEF28-209ENST00000510131 E2F4Q16254 413 aa12.05□□□□□ -0.48
ARHGEF28-209ENST00000510131 WNT2BQ93097 391 aa12.05□□□□□ -0.48
ARHGEF28-209ENST00000510131 PDIA6Q15084 440 aa12.04□□□□□ -0.48
ARHGEF28-209ENST00000510131 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
ARHGEF28-209ENST00000510131 RABGEF1Q9UJ41 708 aa12.04□□□□□ -0.48
ARHGEF28-209ENST00000510131 THSD4Q6ZMP0 1018 aa12.03□□□□□ -0.48
ARHGEF28-209ENST00000510131 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF28-209ENST00000510131 NBR1Q14596 966 aa11.99□□□□□ -0.49
ARHGEF28-209ENST00000510131 KIAA1468Q9P260 1216 aa11.99□□□□□ -0.49
ARHGEF28-209ENST00000510131 ARIH1Q9Y4X5 557 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF28-209ENST00000510131 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
ARHGEF28-209ENST00000510131 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
ARHGEF28-209ENST00000510131 TRIM6-TRIM34B2RNG4 842 aa11.95□□□□□ -0.5
ARHGEF28-209ENST00000510131 MAP3K7O43318 606 aa11.95□□□□□ -0.5
ARHGEF28-209ENST00000510131 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
ARHGEF28-209ENST00000510131 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
ARHGEF28-209ENST00000510131 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
ARHGEF28-209ENST00000510131 GRXCR2A6NFK2 248 aa11.92□□□□□ -0.5
ARHGEF28-209ENST00000510131 SEPT9Q9UHD8 586 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF28-209ENST00000510131 ZFRQ96KR1 1074 aaKnown RBP11.9□□□□□ -0.5
ARHGEF28-209ENST00000510131 TSHZ2Q9NRE2 1034 aa11.9□□□□□ -0.5
ARHGEF28-209ENST00000510131 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
ARHGEF28-209ENST00000510131 BCAMP50895 628 aa11.89□□□□□ -0.51
ARHGEF28-209ENST00000510131 SOWAHBA6NEL2 793 aa11.87□□□□□ -0.51
ARHGEF28-209ENST00000510131 TSKSQ9UJT2 592 aa11.87□□□□□ -0.51
ARHGEF28-209ENST00000510131 FAM98CQ17RN3 349 aaKnown RBP11.86□□□□□ -0.51
ARHGEF28-209ENST00000510131 PACS2Q86VP3 889 aa11.86□□□□□ -0.51
ARHGEF28-209ENST00000510131 OSBPP22059 807 aa11.84□□□□□ -0.51
ARHGEF28-209ENST00000510131 IFFO2Q5TF58 517 aa11.84□□□□□ -0.51
ARHGEF28-209ENST00000510131 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
ARHGEF28-209ENST00000510131 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
ARHGEF28-209ENST00000510131 PRSS12P56730 875 aa11.82□□□□□ -0.52
ARHGEF28-209ENST00000510131 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
ARHGEF28-209ENST00000510131 WBP1LQ9NX94 342 aa11.8□□□□□ -0.52
ARHGEF28-209ENST00000510131 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF28-209ENST00000510131 FAM198AQ9UFP1 575 aa11.8□□□□□ -0.52
ARHGEF28-209ENST00000510131 LRCH3Q96II8 777 aa11.79□□□□□ -0.52
ARHGEF28-209ENST00000510131 SMAPO00193 183 aa11.78□□□□□ -0.52
ARHGEF28-209ENST00000510131 NYAP1Q6ZVC0 841 aa11.78□□□□□ -0.52
ARHGEF28-209ENST00000510131 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
ARHGEF28-209ENST00000510131 TSR3Q9UJK0 312 aaKnown RBP11.77□□□□□ -0.53
ARHGEF28-209ENST00000510131 HPS5Q9UPZ3 1129 aa11.77□□□□□ -0.53
ARHGEF28-209ENST00000510131 A0A0G2JS52 829 aa11.75□□□□□ -0.53
ARHGEF28-209ENST00000510131 KCNV2Q8TDN2 545 aa11.75□□□□□ -0.53
ARHGEF28-209ENST00000510131 TATDN2Q93075 761 aa11.75□□□□□ -0.53
ARHGEF28-209ENST00000510131 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
ARHGEF28-209ENST00000510131 C3orf80F5H4A9 247 aa11.74□□□□□ -0.53
ARHGEF28-209ENST00000510131 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
ARHGEF28-209ENST00000510131 PNMA3Q9UL41 463 aa11.74□□□□□ -0.53
ARHGEF28-209ENST00000510131 SAMD7Q7Z3H4 446 aa11.72□□□□□ -0.53
ARHGEF28-209ENST00000510131 MLLT3P42568 568 aaPredicted RBP11.71□□□□□ -0.53
ARHGEF28-209ENST00000510131 NPDC1Q9NQX5 325 aaPredicted RBP11.71□□□□□ -0.53
ARHGEF28-209ENST00000510131 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
ARHGEF28-209ENST00000510131 RGS20O76081 388 aa11.7□□□□□ -0.54
ARHGEF28-209ENST00000510131 PPP4CP60510 307 aa11.7□□□□□ -0.54
ARHGEF28-209ENST00000510131 NUDT18Q6ZVK8 323 aa11.7□□□□□ -0.54
ARHGEF28-209ENST00000510131 PADI6Q6TGC4 694 aa11.68□□□□□ -0.54
ARHGEF28-209ENST00000510131 TTC13Q8NBP0 860 aa11.68□□□□□ -0.54
ARHGEF28-209ENST00000510131 KCNC4Q03721 635 aa11.67□□□□□ -0.54
ARHGEF28-209ENST00000510131 HDGFP51858 240 aaKnown RBP11.64□□□□□ -0.55
ARHGEF28-209ENST00000510131 P3H3Q8IVL6 736 aa11.63□□□□□ -0.55
ARHGEF28-209ENST00000510131 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
ARHGEF28-209ENST00000510131 RNF40O75150 1001 aa11.6□□□□□ -0.55
ARHGEF28-209ENST00000510131 PTGDRQ13258 359 aa11.58□□□□□ -0.56
ARHGEF28-209ENST00000510131 SWT1Q5T5J6 900 aaKnown RBP11.58□□□□□ -0.56
ARHGEF28-209ENST00000510131 EYA1Q99502 592 aa11.58□□□□□ -0.56
ARHGEF28-209ENST00000510131 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
ARHGEF28-209ENST00000510131 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
ARHGEF28-209ENST00000510131 SEMA3EO15041 775 aa11.56□□□□□ -0.56
ARHGEF28-209ENST00000510131 APLP1P51693 650 aa11.54□□□□□ -0.56
ARHGEF28-209ENST00000510131 SLF2Q8IX21 1173 aa11.54□□□□□ -0.56
ARHGEF28-209ENST00000510131 MTRQ99707 1265 aa11.54□□□□□ -0.56
ARHGEF28-209ENST00000510131 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF28-209ENST00000510131 IL21Q9HBE4 155 aa11.53□□□□□ -0.56
ARHGEF28-209ENST00000510131 NECTIN2Q92692 538 aa11.52□□□□□ -0.57
ARHGEF28-209ENST00000510131 SLC4A3P48751 1232 aa11.5□□□□□ -0.57
ARHGEF28-209ENST00000510131 RBM46Q8TBY0 533 aaKnown RBP11.49□□□□□ -0.57
ARHGEF28-209ENST00000510131 ZNF516Q92618 1163 aa11.49□□□□□ -0.57
ARHGEF28-209ENST00000510131 ADGRG1Q9Y653 693 aa11.49□□□□□ -0.57
ARHGEF28-209ENST00000510131 FCHSD2O94868 740 aa11.48□□□□□ -0.57
ARHGEF28-209ENST00000510131 DNAJB2P25686 324 aa11.47□□□□□ -0.57
ARHGEF28-209ENST00000510131 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
ARHGEF28-209ENST00000510131 TESPA1A2RU30 521 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF28-209ENST00000510131 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF28-209ENST00000510131 COPS2P61201 443 aa11.44□□□□□ -0.58
ARHGEF28-209ENST00000510131 TMEM134Q9H6X4 195 aa11.44□□□□□ -0.58
ARHGEF28-209ENST00000510131 RCCD1A6NED2 376 aa11.43□□□□□ -0.58
ARHGEF28-209ENST00000510131 RBM26Q5T8P6 1007 aaKnown RBP11.42□□□□□ -0.58
ARHGEF28-209ENST00000510131 SMYD5Q6GMV2 418 aa11.42□□□□□ -0.58
ARHGEF28-209ENST00000510131 PPP1R18Q6NYC8 613 aa11.42□□□□□ -0.58
ARHGEF28-209ENST00000510131 NKX2-3Q8TAU0 364 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms