RNA–Protein interactions for RNA: ENST00000510024.5

SEMA6A-209, Transcript of semaphorin 6A, humanhuman

TSL 3

Gene SEMA6A, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-209ENST00000510024 BCL2L12Q9HB09 334 aa10.64□□□□□ -0.71
SEMA6A-209ENST00000510024 CDHR5Q9HBB8 845 aa10.64□□□□□ -0.71
SEMA6A-209ENST00000510024 GNPATO15228 680 aa10.62□□□□□ -0.71
SEMA6A-209ENST00000510024 CERKQ8TCT0 537 aa10.61□□□□□ -0.71
SEMA6A-209ENST00000510024 FAM163AQ96GL9 167 aaPredicted RBP10.61□□□□□ -0.71
SEMA6A-209ENST00000510024 EMP3P54852 163 aa10.6□□□□□ -0.71
SEMA6A-209ENST00000510024 ERBB3P21860 1342 aa10.59□□□□□ -0.71
SEMA6A-209ENST00000510024 MARVELD3Q96A59 401 aa10.59□□□□□ -0.71
SEMA6A-209ENST00000510024 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
SEMA6A-209ENST00000510024 FECHP22830 423 aa10.57□□□□□ -0.72
SEMA6A-209ENST00000510024 MAP2K5Q13163 448 aa10.57□□□□□ -0.72
SEMA6A-209ENST00000510024 SLC24A3Q9HC58 644 aa10.57□□□□□ -0.72
SEMA6A-209ENST00000510024 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
SEMA6A-209ENST00000510024 MINK1Q8N4C8 1332 aaPredicted RBP10.57□□□□□ -0.72
SEMA6A-209ENST00000510024 PTPREP23469 700 aa10.56□□□□□ -0.72
SEMA6A-209ENST00000510024 PPP1R3GB7ZBB8 358 aa10.55□□□□□ -0.72
SEMA6A-209ENST00000510024 TTC13Q8NBP0 860 aa10.55□□□□□ -0.72
SEMA6A-209ENST00000510024 COL9A1P20849 921 aa10.54□□□□□ -0.72
SEMA6A-209ENST00000510024 AK7Q96M32 723 aa10.54□□□□□ -0.72
SEMA6A-209ENST00000510024 POTEB3A0JP26 581 aa10.53□□□□□ -0.72
SEMA6A-209ENST00000510024 FAM205CA6NFA0 338 aa10.53□□□□□ -0.72
SEMA6A-209ENST00000510024 IRF6O14896 467 aa10.53□□□□□ -0.72
SEMA6A-209ENST00000510024 POTEBQ6S5H4 581 aa10.53□□□□□ -0.72
SEMA6A-209ENST00000510024 POTEEQ6S8J3 1075 aa10.53□□□□□ -0.72
SEMA6A-209ENST00000510024 ZNF687Q8N1G0 1237 aa10.53□□□□□ -0.72
SEMA6A-209ENST00000510024 PRSS12P56730 875 aa10.52□□□□□ -0.73
SEMA6A-209ENST00000510024 KRI1Q8N9T8 703 aaKnown RBP10.52□□□□□ -0.73
SEMA6A-209ENST00000510024 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
SEMA6A-209ENST00000510024 PBX2P40425 430 aa10.51□□□□□ -0.73
SEMA6A-209ENST00000510024 ARHGAP33O14559 1287 aa10.5□□□□□ -0.73
SEMA6A-209ENST00000510024 CCDC102AQ96A19 550 aa10.5□□□□□ -0.73
SEMA6A-209ENST00000510024 CDCA7LQ96GN5 454 aa10.5□□□□□ -0.73
SEMA6A-209ENST00000510024 KCNK17Q96T54 332 aa10.5□□□□□ -0.73
SEMA6A-209ENST00000510024 PADI6Q6TGC4 694 aa10.49□□□□□ -0.73
SEMA6A-209ENST00000510024 KCNH8Q96L42 1107 aa10.48□□□□□ -0.73
SEMA6A-209ENST00000510024 SLC4A5Q9BY07 1137 aa10.48□□□□□ -0.73
SEMA6A-209ENST00000510024 TRIM66O15016 1216 aa10.47□□□□□ -0.73
SEMA6A-209ENST00000510024 ONECUT3O60422 494 aaPredicted RBP10.47□□□□□ -0.73
SEMA6A-209ENST00000510024 PSEN2P49810 448 aa10.47□□□□□ -0.73
SEMA6A-209ENST00000510024 ZBED2Q9BTP6 218 aa10.47□□□□□ -0.73
SEMA6A-209ENST00000510024 FAM198AQ9UFP1 575 aa10.47□□□□□ -0.73
SEMA6A-209ENST00000510024 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
SEMA6A-209ENST00000510024 TSKSQ9UJT2 592 aa10.45□□□□□ -0.74
SEMA6A-209ENST00000510024 ADGRG1Q9Y653 693 aa10.45□□□□□ -0.74
SEMA6A-209ENST00000510024 AMHR2Q16671 573 aa10.44□□□□□ -0.74
SEMA6A-209ENST00000510024 AXIN2Q9Y2T1 843 aa10.44□□□□□ -0.74
SEMA6A-209ENST00000510024 BRPF1P55201 1214 aaPredicted RBP10.43□□□□□ -0.74
SEMA6A-209ENST00000510024 DMRTA1Q5VZB9 504 aa10.43□□□□□ -0.74
SEMA6A-209ENST00000510024 OATP04181 439 aa10.42□□□□□ -0.74
SEMA6A-209ENST00000510024 PROX2Q3B8N5 592 aa10.42□□□□□ -0.74
SEMA6A-209ENST00000510024 PDE4DQ08499 809 aa10.41□□□□□ -0.74
SEMA6A-209ENST00000510024 METTL3Q86U44 580 aaKnown RBP10.41□□□□□ -0.74
SEMA6A-209ENST00000510024 PXYLP1Q8TE99 480 aa10.41□□□□□ -0.74
SEMA6A-209ENST00000510024 PHOX2BQ99453 314 aa10.4□□□□□ -0.74
SEMA6A-209ENST00000510024 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
SEMA6A-209ENST00000510024 TK2O00142 265 aa10.39□□□□□ -0.75
SEMA6A-209ENST00000510024 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
SEMA6A-209ENST00000510024 PACS2Q86VP3 889 aa10.39□□□□□ -0.75
SEMA6A-209ENST00000510024 EYA1Q99502 592 aa10.39□□□□□ -0.75
SEMA6A-209ENST00000510024 NBPF26B4DH59 902 aa10.38□□□□□ -0.75
SEMA6A-209ENST00000510024 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
SEMA6A-209ENST00000510024 RABGEF1Q9UJ41 708 aa10.38□□□□□ -0.75
SEMA6A-209ENST00000510024 VPS9D1Q9Y2B5 631 aa10.38□□□□□ -0.75
SEMA6A-209ENST00000510024 LSM11P83369 360 aaKnown RBP eCLIP10.37□□□□□ -0.75
SEMA6A-209ENST00000510024 TATDN2Q93075 761 aa10.37□□□□□ -0.75
SEMA6A-209ENST00000510024 TMUB1Q9BVT8 246 aa10.37□□□□□ -0.75
SEMA6A-209ENST00000510024 KIAA1468Q9P260 1216 aa10.37□□□□□ -0.75
SEMA6A-209ENST00000510024 NUDT18Q6ZVK8 323 aa10.36□□□□□ -0.75
SEMA6A-209ENST00000510024 NEUROD2Q15784 382 aa10.35□□□□□ -0.75
SEMA6A-209ENST00000510024 PARP9Q8IXQ6 854 aa10.35□□□□□ -0.75
SEMA6A-209ENST00000510024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.34□□□□□ -0.75
SEMA6A-209ENST00000510024 BHMG1C9JSJ3 638 aaPredicted RBP10.34□□□□□ -0.75
SEMA6A-209ENST00000510024 PNMA3Q9UL41 463 aa10.34□□□□□ -0.75
SEMA6A-209ENST00000510024 CLCN1P35523 988 aa10.32□□□□□ -0.76
SEMA6A-209ENST00000510024 KRTAP3-3Q9BYR6 98 aa10.32□□□□□ -0.76
SEMA6A-209ENST00000510024 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
SEMA6A-209ENST00000510024 GPBP1L1Q9HC44 474 aaPredicted RBP10.32□□□□□ -0.76
SEMA6A-209ENST00000510024 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
SEMA6A-209ENST00000510024 ADGRD1Q6QNK2 874 aa10.31□□□□□ -0.76
SEMA6A-209ENST00000510024 POTEGQ6S5H5 508 aa10.31□□□□□ -0.76
SEMA6A-209ENST00000510024 REPIN1Q9BWE0 567 aaKnown RBP10.31□□□□□ -0.76
SEMA6A-209ENST00000510024 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
SEMA6A-209ENST00000510024 POTEMA6NI47 508 aa10.3□□□□□ -0.76
SEMA6A-209ENST00000510024 HRO43593 1189 aa10.3□□□□□ -0.76
SEMA6A-209ENST00000510024 DNAJB2P25686 324 aa10.3□□□□□ -0.76
SEMA6A-209ENST00000510024 MDM2Q00987 491 aaPredicted RBP10.3□□□□□ -0.76
SEMA6A-209ENST00000510024 TTLL12Q14166 644 aaPredicted RBP10.3□□□□□ -0.76
SEMA6A-209ENST00000510024 LAPTM4BQ86VI4 370 aa10.3□□□□□ -0.76
SEMA6A-209ENST00000510024 GPCPD1Q9NPB8 672 aa10.3□□□□□ -0.76
SEMA6A-209ENST00000510024 SMAPO00193 183 aa10.29□□□□□ -0.76
SEMA6A-209ENST00000510024 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
SEMA6A-209ENST00000510024 NBPF3Q9H094 633 aa10.29□□□□□ -0.76
SEMA6A-209ENST00000510024 TMEM134Q9H6X4 195 aa10.29□□□□□ -0.76
SEMA6A-209ENST00000510024 FAM98CQ17RN3 349 aaKnown RBP10.28□□□□□ -0.76
SEMA6A-209ENST00000510024 NLRP7Q8WX94 980 aa10.28□□□□□ -0.76
SEMA6A-209ENST00000510024 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.77
SEMA6A-209ENST00000510024 SEPT9Q9UHD8 586 aaPredicted RBP10.27□□□□□ -0.77
SEMA6A-209ENST00000510024 FAM217BQ9NTX9 383 aaPredicted RBP10.26□□□□□ -0.77
SEMA6A-209ENST00000510024 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
SEMA6A-209ENST00000510024 CDAN1Q8IWY9 1227 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms