RNA–Protein interactions for RNA: ENST00000509477.1

CLGN-203, Transcript of calmegin, humanhuman

TSL 3

Gene CLGN, Length 706 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-203ENST00000509477 KIAA0556O60303 1618 aa10.9□□□□□ -0.66
CLGN-203ENST00000509477 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
CLGN-203ENST00000509477 MS4A3Q96HJ5 214 aa10.89□□□□□ -0.67
CLGN-203ENST00000509477 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
CLGN-203ENST00000509477 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
CLGN-203ENST00000509477 IFNL1Q8IU54 200 aa10.88□□□□□ -0.67
CLGN-203ENST00000509477 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
CLGN-203ENST00000509477 UGGT2Q9NYU1 1516 aa10.87□□□□□ -0.67
CLGN-203ENST00000509477 PHLDB1Q86UU1 1377 aa10.87□□□□□ -0.67
CLGN-203ENST00000509477 ARID3CA6NKF2 412 aa10.85□□□□□ -0.67
CLGN-203ENST00000509477 PSEN1P49768 467 aa10.85□□□□□ -0.67
CLGN-203ENST00000509477 FAM9AQ8IZU1 332 aaPredicted RBP10.85□□□□□ -0.67
CLGN-203ENST00000509477 POGZQ7Z3K3 1410 aa10.84□□□□□ -0.67
CLGN-203ENST00000509477 MLECQ14165 292 aa10.83□□□□□ -0.68
CLGN-203ENST00000509477 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
CLGN-203ENST00000509477 FANCAO15360 1455 aa10.81□□□□□ -0.68
CLGN-203ENST00000509477 NKX1-1Q15270 411 aaPredicted RBP10.81□□□□□ -0.68
CLGN-203ENST00000509477 ASTLQ6HA08 431 aaPredicted RBP10.81□□□□□ -0.68
CLGN-203ENST00000509477 NEO1Q92859 1461 aa10.81□□□□□ -0.68
CLGN-203ENST00000509477 ARHGEF40Q8TER5 1519 aa10.8□□□□□ -0.68
CLGN-203ENST00000509477 PELP1Q8IZL8 1130 aaKnown RBP10.8□□□□□ -0.68
CLGN-203ENST00000509477 YEATS2Q9ULM3 1422 aa10.8□□□□□ -0.68
CLGN-203ENST00000509477 ABCA8O94911 1581 aa10.8□□□□□ -0.68
CLGN-203ENST00000509477 FRMPD1Q5SYB0 1578 aa10.79□□□□□ -0.68
CLGN-203ENST00000509477 PRKCSHP14314 528 aaPredicted RBP10.79□□□□□ -0.68
CLGN-203ENST00000509477 GOLGA3Q08378 1498 aa10.79□□□□□ -0.68
CLGN-203ENST00000509477 AKNAQ7Z591 1439 aa10.78□□□□□ -0.68
CLGN-203ENST00000509477 ABCA9Q8IUA7 1624 aa10.78□□□□□ -0.68
CLGN-203ENST00000509477 ATMINO43313 823 aaPredicted RBP10.78□□□□□ -0.68
CLGN-203ENST00000509477 RAPGEF2Q9Y4G8 1499 aa10.78□□□□□ -0.68
CLGN-203ENST00000509477 PREX1Q8TCU6 1659 aa10.78□□□□□ -0.68
CLGN-203ENST00000509477 FER1L4A9Z1Z3 1794 aa10.77□□□□□ -0.68
CLGN-203ENST00000509477 METRNQ9UJH8 293 aa10.76□□□□□ -0.69
CLGN-203ENST00000509477 DENND4BO75064 1496 aaPredicted RBP10.75□□□□□ -0.69
CLGN-203ENST00000509477 TIE1P35590 1138 aa10.75□□□□□ -0.69
CLGN-203ENST00000509477 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
CLGN-203ENST00000509477 SLC39A7Q92504 469 aa10.75□□□□□ -0.69
CLGN-203ENST00000509477 TTC37Q6PGP7 1564 aa10.74□□□□□ -0.69
CLGN-203ENST00000509477 GTPBP6O43824 516 aaPredicted RBP10.74□□□□□ -0.69
CLGN-203ENST00000509477 C7P10643 843 aa10.74□□□□□ -0.69
CLGN-203ENST00000509477 RYDENQ9NUL5 291 aaKnown RBP10.74□□□□□ -0.69
CLGN-203ENST00000509477 UHRF1BP1Q6BDS2 1440 aa10.74□□□□□ -0.69
CLGN-203ENST00000509477 CTTNBP2Q8WZ74 1663 aa10.73□□□□□ -0.69
CLGN-203ENST00000509477 STRCQ7RTU9 1775 aa10.73□□□□□ -0.69
CLGN-203ENST00000509477 ATP10BO94823 1461 aa10.73□□□□□ -0.69
CLGN-203ENST00000509477 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
CLGN-203ENST00000509477 ZFYVE16Q7Z3T8 1539 aa10.73□□□□□ -0.69
CLGN-203ENST00000509477 CEBPAP49715 358 aaPredicted RBP10.72□□□□□ -0.69
CLGN-203ENST00000509477 CABP2Q9NPB3 220 aa10.72□□□□□ -0.69
CLGN-203ENST00000509477 UBAP1LF5GYI3 381 aa10.71□□□□□ -0.69
CLGN-203ENST00000509477 IQSEC2Q5JU85 1478 aa10.71□□□□□ -0.69
CLGN-203ENST00000509477 RICTORQ6R327 1708 aa10.71□□□□□ -0.69
CLGN-203ENST00000509477 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
CLGN-203ENST00000509477 PTPRTO14522 1441 aa10.7□□□□□ -0.7
CLGN-203ENST00000509477 ATN1P54259 1190 aaPredicted RBP10.7□□□□□ -0.7
CLGN-203ENST00000509477 P3H3Q8IVL6 736 aa10.7□□□□□ -0.7
CLGN-203ENST00000509477 TMEM106CQ9BVX2 250 aa10.7□□□□□ -0.7
CLGN-203ENST00000509477 TSHZ2Q9NRE2 1034 aa10.7□□□□□ -0.7
CLGN-203ENST00000509477 TRPC6Q9Y210 931 aa10.69□□□□□ -0.7
CLGN-203ENST00000509477 CFAP74Q9C0B2 1584 aa10.69□□□□□ -0.7
CLGN-203ENST00000509477 FHOD3Q2V2M9 1422 aa10.68□□□□□ -0.7
CLGN-203ENST00000509477 SIGLEC1Q9BZZ2 1709 aa10.68□□□□□ -0.7
CLGN-203ENST00000509477 POTEJP0CG39 1038 aa10.68□□□□□ -0.7
CLGN-203ENST00000509477 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
CLGN-203ENST00000509477 EFCAB3Q8N7B9 438 aa10.68□□□□□ -0.7
CLGN-203ENST00000509477 LTBP4Q8N2S1 1624 aa10.68□□□□□ -0.7
CLGN-203ENST00000509477 MAGI2Q86UL8 1455 aa10.67□□□□□ -0.7
CLGN-203ENST00000509477 TTLL13PA6NNM8 815 aa10.66□□□□□ -0.7
CLGN-203ENST00000509477 FAM163AQ96GL9 167 aaPredicted RBP10.66□□□□□ -0.7
CLGN-203ENST00000509477 ZMYM4Q5VZL5 1548 aa10.66□□□□□ -0.7
CLGN-203ENST00000509477 ARHGEF12Q9NZN5 1544 aa10.65□□□□□ -0.7
CLGN-203ENST00000509477 ESF1Q9H501 851 aaKnown RBP10.65□□□□□ -0.7
CLGN-203ENST00000509477 SCUBE2Q9NQ36 999 aa10.65□□□□□ -0.7
CLGN-203ENST00000509477 MED1Q15648 1581 aaPredicted RBP10.65□□□□□ -0.71
CLGN-203ENST00000509477 SOX12O15370 315 aa10.64□□□□□ -0.71
CLGN-203ENST00000509477 MFRPQ9BY79 579 aa10.64□□□□□ -0.71
CLGN-203ENST00000509477 MYT1LQ9UL68 1186 aa10.64□□□□□ -0.71
CLGN-203ENST00000509477 HECW1Q76N89 1606 aa10.64□□□□□ -0.71
CLGN-203ENST00000509477 PLEKHD1A6NEE1 506 aa10.63□□□□□ -0.71
CLGN-203ENST00000509477 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
CLGN-203ENST00000509477 LCE2DQ5TA82 110 aaPredicted RBP10.63□□□□□ -0.71
CLGN-203ENST00000509477 C9orf84Q5VXU9 1444 aa10.63□□□□□ -0.71
CLGN-203ENST00000509477 RAPGEF6Q8TEU7 1601 aa10.62□□□□□ -0.71
CLGN-203ENST00000509477 ATP10AO60312 1499 aa10.62□□□□□ -0.71
CLGN-203ENST00000509477 NLRP6P59044 892 aa10.62□□□□□ -0.71
CLGN-203ENST00000509477 PIP4K2BP78356 416 aa10.61□□□□□ -0.71
CLGN-203ENST00000509477 HSPA1LP34931 641 aa10.6□□□□□ -0.71
CLGN-203ENST00000509477 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
CLGN-203ENST00000509477 PHF8Q9UPP1 1060 aa10.6□□□□□ -0.71
CLGN-203ENST00000509477 KDM2AQ9Y2K7 1162 aa10.6□□□□□ -0.71
CLGN-203ENST00000509477 ZNF335Q9H4Z2 1342 aaPredicted RBP10.59□□□□□ -0.71
CLGN-203ENST00000509477 SCAPERQ9BY12 1400 aa10.59□□□□□ -0.71
CLGN-203ENST00000509477 IER5LQ5T953 404 aa10.59□□□□□ -0.71
CLGN-203ENST00000509477 TRIM35Q9UPQ4 493 aa10.59□□□□□ -0.71
CLGN-203ENST00000509477 NCOA1Q15788 1441 aa10.58□□□□□ -0.72
CLGN-203ENST00000509477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLGN-203ENST00000509477 FBXO22Q8NEZ5 403 aa10.57□□□□□ -0.72
CLGN-203ENST00000509477 C3P01024 1663 aa10.57□□□□□ -0.72
CLGN-203ENST00000509477 SETD1BQ9UPS6 1966 aaKnown RBP10.56□□□□□ -0.72
CLGN-203ENST00000509477 CAMSAP1Q5T5Y3 1602 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms