RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 MRPL50Q8N5N7 158 aaKnown RBP8.67□□□□□ -1.02
SPARCL1-206ENST00000509407 EPAS1Q99814 870 aa8.67□□□□□ -1.02
SPARCL1-206ENST00000509407 NBPF3Q9H094 633 aa8.67□□□□□ -1.02
SPARCL1-206ENST00000509407 BHMG1C9JSJ3 638 aaPredicted RBP8.66□□□□□ -1.02
SPARCL1-206ENST00000509407 ARXQ96QS3 562 aa8.66□□□□□ -1.02
SPARCL1-206ENST00000509407 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
SPARCL1-206ENST00000509407 TTBK1Q5TCY1 1321 aaPredicted RBP8.65□□□□□ -1.02
SPARCL1-206ENST00000509407 WDR70Q9NW82 654 aa8.64□□□□□ -1.03
SPARCL1-206ENST00000509407 WNT2BQ93097 391 aa8.62□□□□□ -1.03
SPARCL1-206ENST00000509407 RABGEF1Q9UJ41 708 aa8.62□□□□□ -1.03
SPARCL1-206ENST00000509407 SPDYE16A6NNV3 312 aaPredicted RBP8.61□□□□□ -1.03
SPARCL1-206ENST00000509407 COL9A1P20849 921 aa8.61□□□□□ -1.03
SPARCL1-206ENST00000509407 PTPN5P54829 565 aa8.61□□□□□ -1.03
SPARCL1-206ENST00000509407 PDIA6Q15084 440 aa8.61□□□□□ -1.03
SPARCL1-206ENST00000509407 E2F4Q16254 413 aa8.61□□□□□ -1.03
SPARCL1-206ENST00000509407 THSD4Q6ZMP0 1018 aa8.61□□□□□ -1.03
SPARCL1-206ENST00000509407 DDX12PQ92771 950 aa8.61□□□□□ -1.03
SPARCL1-206ENST00000509407 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
SPARCL1-206ENST00000509407 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
SPARCL1-206ENST00000509407 RBM33Q96EV2 1170 aaKnown RBP8.59□□□□□ -1.03
SPARCL1-206ENST00000509407 ONECUT3O60422 494 aaPredicted RBP8.58□□□□□ -1.04
SPARCL1-206ENST00000509407 NBR1Q14596 966 aa8.58□□□□□ -1.04
SPARCL1-206ENST00000509407 LAPTM4BQ86VI4 370 aa8.57□□□□□ -1.04
SPARCL1-206ENST00000509407 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
SPARCL1-206ENST00000509407 KIAA1468Q9P260 1216 aa8.56□□□□□ -1.04
SPARCL1-206ENST00000509407 ARIH1Q9Y4X5 557 aaPredicted RBP8.56□□□□□ -1.04
SPARCL1-206ENST00000509407 MAP3K7O43318 606 aa8.55□□□□□ -1.04
SPARCL1-206ENST00000509407 EN1Q05925 392 aaPredicted RBP8.55□□□□□ -1.04
SPARCL1-206ENST00000509407 TRIM6-TRIM34B2RNG4 842 aa8.54□□□□□ -1.04
SPARCL1-206ENST00000509407 MYT1Q01538 1121 aa8.54□□□□□ -1.04
SPARCL1-206ENST00000509407 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
SPARCL1-206ENST00000509407 ZFRQ96KR1 1074 aaKnown RBP8.51□□□□□ -1.05
SPARCL1-206ENST00000509407 GRXCR2A6NFK2 248 aa8.5□□□□□ -1.05
SPARCL1-206ENST00000509407 FAM98CQ17RN3 349 aaKnown RBP8.5□□□□□ -1.05
SPARCL1-206ENST00000509407 TSR1Q2NL82 804 aaKnown RBP8.5□□□□□ -1.05
SPARCL1-206ENST00000509407 PACS2Q86VP3 889 aa8.5□□□□□ -1.05
SPARCL1-206ENST00000509407 CERKQ8TCT0 537 aa8.5□□□□□ -1.05
SPARCL1-206ENST00000509407 SOWAHBA6NEL2 793 aa8.49□□□□□ -1.05
SPARCL1-206ENST00000509407 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
SPARCL1-206ENST00000509407 SEPT9Q9UHD8 586 aaPredicted RBP8.49□□□□□ -1.05
SPARCL1-206ENST00000509407 BCAMP50895 628 aa8.48□□□□□ -1.05
SPARCL1-206ENST00000509407 NYAP1Q6ZVC0 841 aa8.48□□□□□ -1.05
SPARCL1-206ENST00000509407 RANGAP1P46060 587 aaPredicted RBP8.45□□□□□ -1.06
SPARCL1-206ENST00000509407 CDCA7LQ96GN5 454 aa8.45□□□□□ -1.06
SPARCL1-206ENST00000509407 BCANQ96GW7 911 aa8.45□□□□□ -1.06
SPARCL1-206ENST00000509407 LRCH3Q96II8 777 aa8.45□□□□□ -1.06
SPARCL1-206ENST00000509407 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.45□□□□□ -1.06
SPARCL1-206ENST00000509407 TSKSQ9UJT2 592 aa8.45□□□□□ -1.06
SPARCL1-206ENST00000509407 PRSS12P56730 875 aa8.44□□□□□ -1.06
SPARCL1-206ENST00000509407 OSBPP22059 807 aa8.43□□□□□ -1.06
SPARCL1-206ENST00000509407 TSHZ2Q9NRE2 1034 aa8.43□□□□□ -1.06
SPARCL1-206ENST00000509407 NBPF26B4DH59 902 aa8.42□□□□□ -1.06
SPARCL1-206ENST00000509407 RGS20O76081 388 aa8.42□□□□□ -1.06
SPARCL1-206ENST00000509407 PRIM1P49642 420 aaKnown RBP8.42□□□□□ -1.06
SPARCL1-206ENST00000509407 ERICH6Q7L0X2 663 aa8.42□□□□□ -1.06
SPARCL1-206ENST00000509407 ARHGEF1Q92888 912 aaKnown RBP8.42□□□□□ -1.06
SPARCL1-206ENST00000509407 WBP1LQ9NX94 342 aa8.42□□□□□ -1.06
SPARCL1-206ENST00000509407 TSR3Q9UJK0 312 aaKnown RBP8.42□□□□□ -1.06
SPARCL1-206ENST00000509407 A0A0G2JS52 829 aa8.41□□□□□ -1.06
SPARCL1-206ENST00000509407 ITGBL1O95965 494 aaPredicted RBP8.41□□□□□ -1.06
SPARCL1-206ENST00000509407 RBM27Q9P2N5 1060 aaKnown RBP8.41□□□□□ -1.06
SPARCL1-206ENST00000509407 HPS5Q9UPZ3 1129 aa8.41□□□□□ -1.06
SPARCL1-206ENST00000509407 HOMEZQ8IX15 550 aa8.39□□□□□ -1.07
SPARCL1-206ENST00000509407 CDHR5Q9HBB8 845 aa8.39□□□□□ -1.07
SPARCL1-206ENST00000509407 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
SPARCL1-206ENST00000509407 TIMELESSQ9UNS1 1208 aa8.39□□□□□ -1.07
SPARCL1-206ENST00000509407 TATDN2Q93075 761 aa8.38□□□□□ -1.07
SPARCL1-206ENST00000509407 SMAPO00193 183 aa8.37□□□□□ -1.07
SPARCL1-206ENST00000509407 HDGFP51858 240 aaKnown RBP8.37□□□□□ -1.07
SPARCL1-206ENST00000509407 PPP4CP60510 307 aa8.37□□□□□ -1.07
SPARCL1-206ENST00000509407 KCNC4Q03721 635 aa8.37□□□□□ -1.07
SPARCL1-206ENST00000509407 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
SPARCL1-206ENST00000509407 FAM198AQ9UFP1 575 aa8.37□□□□□ -1.07
SPARCL1-206ENST00000509407 SAMD7Q7Z3H4 446 aa8.36□□□□□ -1.07
SPARCL1-206ENST00000509407 P3H3Q8IVL6 736 aa8.36□□□□□ -1.07
SPARCL1-206ENST00000509407 NUDT18Q6ZVK8 323 aa8.35□□□□□ -1.07
SPARCL1-206ENST00000509407 PADI6Q6TGC4 694 aa8.33□□□□□ -1.08
SPARCL1-206ENST00000509407 RNF40O75150 1001 aa8.32□□□□□ -1.08
SPARCL1-206ENST00000509407 MLLT3P42568 568 aaPredicted RBP8.32□□□□□ -1.08
SPARCL1-206ENST00000509407 TTC13Q8NBP0 860 aa8.32□□□□□ -1.08
SPARCL1-206ENST00000509407 NECTIN2Q92692 538 aa8.32□□□□□ -1.08
SPARCL1-206ENST00000509407 NPDC1Q9NQX5 325 aaPredicted RBP8.32□□□□□ -1.08
SPARCL1-206ENST00000509407 C3orf80F5H4A9 247 aa8.31□□□□□ -1.08
SPARCL1-206ENST00000509407 TULP1O00294 542 aaPredicted RBP8.31□□□□□ -1.08
SPARCL1-206ENST00000509407 SLC4A3P48751 1232 aa8.31□□□□□ -1.08
SPARCL1-206ENST00000509407 SLF2Q8IX21 1173 aa8.28□□□□□ -1.08
SPARCL1-206ENST00000509407 PLCB2Q00722 1185 aa8.27□□□□□ -1.09
SPARCL1-206ENST00000509407 PTGDRQ13258 359 aa8.27□□□□□ -1.09
SPARCL1-206ENST00000509407 IRX2Q9BZI1 471 aaPredicted RBP8.27□□□□□ -1.09
SPARCL1-206ENST00000509407 NUTM2FA1L443 756 aa8.26□□□□□ -1.09
SPARCL1-206ENST00000509407 TPRNQ4KMQ1 711 aa8.26□□□□□ -1.09
SPARCL1-206ENST00000509407 SWT1Q5T5J6 900 aaKnown RBP8.26□□□□□ -1.09
SPARCL1-206ENST00000509407 TJAP1Q5JTD0 557 aa8.25□□□□□ -1.09
SPARCL1-206ENST00000509407 EYA1Q99502 592 aa8.25□□□□□ -1.09
SPARCL1-206ENST00000509407 IL21Q9HBE4 155 aa8.25□□□□□ -1.09
SPARCL1-206ENST00000509407 RBM46Q8TBY0 533 aaKnown RBP8.24□□□□□ -1.09
SPARCL1-206ENST00000509407 MTRQ99707 1265 aa8.24□□□□□ -1.09
SPARCL1-206ENST00000509407 APLP1P51693 650 aa8.23□□□□□ -1.09
SPARCL1-206ENST00000509407 PRR14Q9BWN1 585 aa8.23□□□□□ -1.09
SPARCL1-206ENST00000509407 SEMA3EO15041 775 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms