RNA–Protein interactions for RNA: ENST00000509312.2

DDX4-209, Transcript of DEAD-box helicase 4, humanhuman

TSL 5

Gene DDX4, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-209ENST00000509312 MARVELD3Q96A59 401 aa14.09□□□□□ -0.15
DDX4-209ENST00000509312 GNPATO15228 680 aa14.07□□□□□ -0.16
DDX4-209ENST00000509312 PPP4R3BQ5MIZ7 849 aa14.07□□□□□ -0.16
DDX4-209ENST00000509312 LCE2DQ5TA82 110 aaPredicted RBP14.07□□□□□ -0.16
DDX4-209ENST00000509312 HIC1Q14526 733 aa14.06□□□□□ -0.16
DDX4-209ENST00000509312 KRI1Q8N9T8 703 aaKnown RBP14.06□□□□□ -0.16
DDX4-209ENST00000509312 PSDA5PKW4 1024 aaPredicted RBP14.04□□□□□ -0.16
DDX4-209ENST00000509312 BCL2L12Q9HB09 334 aa14.03□□□□□ -0.16
DDX4-209ENST00000509312 ERBB3P21860 1342 aa14.02□□□□□ -0.17
DDX4-209ENST00000509312 COL9A1P20849 921 aa14.02□□□□□ -0.17
DDX4-209ENST00000509312 VARS2Q5ST30 1063 aaKnown RBP14.02□□□□□ -0.17
DDX4-209ENST00000509312 EMP3P54852 163 aa14.01□□□□□ -0.17
DDX4-209ENST00000509312 POTEB3A0JP26 581 aa13.99□□□□□ -0.17
DDX4-209ENST00000509312 MAP2K5Q13163 448 aa13.99□□□□□ -0.17
DDX4-209ENST00000509312 POTEBQ6S5H4 581 aa13.99□□□□□ -0.17
DDX4-209ENST00000509312 AK7Q96M32 723 aa13.99□□□□□ -0.17
DDX4-209ENST00000509312 IRF6O14896 467 aa13.98□□□□□ -0.17
DDX4-209ENST00000509312 POTEEQ6S8J3 1075 aa13.98□□□□□ -0.17
DDX4-209ENST00000509312 MINK1Q8N4C8 1332 aaPredicted RBP13.97□□□□□ -0.17
DDX4-209ENST00000509312 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
DDX4-209ENST00000509312 CCDC102AQ96A19 550 aa13.97□□□□□ -0.17
DDX4-209ENST00000509312 PTPREP23469 700 aa13.95□□□□□ -0.18
DDX4-209ENST00000509312 FAM161AQ3B820 660 aa13.95□□□□□ -0.18
DDX4-209ENST00000509312 PADI6Q6TGC4 694 aa13.95□□□□□ -0.18
DDX4-209ENST00000509312 KCNK17Q96T54 332 aa13.95□□□□□ -0.18
DDX4-209ENST00000509312 TRIM66O15016 1216 aa13.94□□□□□ -0.18
DDX4-209ENST00000509312 PSEN2P49810 448 aa13.93□□□□□ -0.18
DDX4-209ENST00000509312 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
DDX4-209ENST00000509312 CERKQ8TCT0 537 aa13.93□□□□□ -0.18
DDX4-209ENST00000509312 FAM198AQ9UFP1 575 aa13.93□□□□□ -0.18
DDX4-209ENST00000509312 PRSS12P56730 875 aa13.92□□□□□ -0.18
DDX4-209ENST00000509312 TTC13Q8NBP0 860 aa13.92□□□□□ -0.18
DDX4-209ENST00000509312 CDCA7LQ96GN5 454 aa13.92□□□□□ -0.18
DDX4-209ENST00000509312 AXIN2Q9Y2T1 843 aa13.92□□□□□ -0.18
DDX4-209ENST00000509312 PPP1R3GB7ZBB8 358 aa13.91□□□□□ -0.18
DDX4-209ENST00000509312 HS3ST6Q96QI5 342 aa13.9□□□□□ -0.18
DDX4-209ENST00000509312 C3orf80F5H4A9 247 aa13.88□□□□□ -0.19
DDX4-209ENST00000509312 TSKSQ9UJT2 592 aa13.88□□□□□ -0.19
DDX4-209ENST00000509312 PROX2Q3B8N5 592 aa13.87□□□□□ -0.19
DDX4-209ENST00000509312 ZNF687Q8N1G0 1237 aa13.87□□□□□ -0.19
DDX4-209ENST00000509312 PHOX2BQ99453 314 aa13.87□□□□□ -0.19
DDX4-209ENST00000509312 PDE4DQ08499 809 aa13.86□□□□□ -0.19
DDX4-209ENST00000509312 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
DDX4-209ENST00000509312 DMRTA1Q5VZB9 504 aa13.86□□□□□ -0.19
DDX4-209ENST00000509312 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
DDX4-209ENST00000509312 ADGRG1Q9Y653 693 aa13.86□□□□□ -0.19
DDX4-209ENST00000509312 ARHGAP33O14559 1287 aa13.85□□□□□ -0.19
DDX4-209ENST00000509312 GPBP1L1Q9HC44 474 aaPredicted RBP13.85□□□□□ -0.19
DDX4-209ENST00000509312 ZBED2Q9BTP6 218 aa13.83□□□□□ -0.2
DDX4-209ENST00000509312 TRIM6-TRIM34B2RNG4 842 aa13.82□□□□□ -0.2
DDX4-209ENST00000509312 NLRP7Q8WX94 980 aa13.82□□□□□ -0.2
DDX4-209ENST00000509312 AMHR2Q16671 573 aa13.8□□□□□ -0.2
DDX4-209ENST00000509312 METTL3Q86U44 580 aaKnown RBP13.8□□□□□ -0.2
DDX4-209ENST00000509312 PXYLP1Q8TE99 480 aa13.79□□□□□ -0.2
DDX4-209ENST00000509312 REPIN1Q9BWE0 567 aaKnown RBP13.79□□□□□ -0.2
DDX4-209ENST00000509312 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
DDX4-209ENST00000509312 PBX2P40425 430 aa13.77□□□□□ -0.21
DDX4-209ENST00000509312 NUDT18Q6ZVK8 323 aa13.77□□□□□ -0.21
DDX4-209ENST00000509312 PARP9Q8IXQ6 854 aa13.77□□□□□ -0.21
DDX4-209ENST00000509312 SMAPO00193 183 aa13.76□□□□□ -0.21
DDX4-209ENST00000509312 OATP04181 439 aa13.76□□□□□ -0.21
DDX4-209ENST00000509312 EYA1Q99502 592 aa13.76□□□□□ -0.21
DDX4-209ENST00000509312 KDM4CQ9H3R0 1056 aa13.76□□□□□ -0.21
DDX4-209ENST00000509312 KIAA1468Q9P260 1216 aa13.76□□□□□ -0.21
DDX4-209ENST00000509312 TATDN2Q93075 761 aa13.75□□□□□ -0.21
DDX4-209ENST00000509312 MDM2Q00987 491 aaPredicted RBP13.73□□□□□ -0.21
DDX4-209ENST00000509312 PACS2Q86VP3 889 aa13.73□□□□□ -0.21
DDX4-209ENST00000509312 PNMA3Q9UL41 463 aa13.73□□□□□ -0.21
DDX4-209ENST00000509312 VPS9D1Q9Y2B5 631 aa13.73□□□□□ -0.21
DDX4-209ENST00000509312 ONECUT3O60422 494 aaPredicted RBP13.72□□□□□ -0.21
DDX4-209ENST00000509312 TTLL12Q14166 644 aaPredicted RBP13.72□□□□□ -0.21
DDX4-209ENST00000509312 RBM46Q8TBY0 533 aaKnown RBP13.72□□□□□ -0.21
DDX4-209ENST00000509312 TMUB1Q9BVT8 246 aa13.72□□□□□ -0.21
DDX4-209ENST00000509312 SLC4A5Q9BY07 1137 aa13.72□□□□□ -0.21
DDX4-209ENST00000509312 NBPF26B4DH59 902 aa13.69□□□□□ -0.22
DDX4-209ENST00000509312 RABGEF1Q9UJ41 708 aa13.69□□□□□ -0.22
DDX4-209ENST00000509312 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
DDX4-209ENST00000509312 LSM11P83369 360 aaKnown RBP eCLIP13.68□□□□□ -0.22
DDX4-209ENST00000509312 GIGYF2Q6Y7W6 1299 aaKnown RBP13.68□□□□□ -0.22
DDX4-209ENST00000509312 SEPT9Q9UHD8 586 aaPredicted RBP13.68□□□□□ -0.22
DDX4-209ENST00000509312 MS4A1P11836 297 aa13.66□□□□□ -0.22
DDX4-209ENST00000509312 FAM117AQ9C073 453 aa13.66□□□□□ -0.22
DDX4-209ENST00000509312 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
DDX4-209ENST00000509312 CLCN1P35523 988 aa13.65□□□□□ -0.22
DDX4-209ENST00000509312 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
DDX4-209ENST00000509312 IL27Q8NEV9 243 aa13.64□□□□□ -0.23
DDX4-209ENST00000509312 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.63□□□□□ -0.23
DDX4-209ENST00000509312 ADGRD1Q6QNK2 874 aa13.63□□□□□ -0.23
DDX4-209ENST00000509312 KRTAP3-3Q9BYR6 98 aa13.63□□□□□ -0.23
DDX4-209ENST00000509312 KRTAP3-2Q9BYR7 98 aa13.63□□□□□ -0.23
DDX4-209ENST00000509312 TK2O00142 265 aa13.62□□□□□ -0.23
DDX4-209ENST00000509312 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
DDX4-209ENST00000509312 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
DDX4-209ENST00000509312 DNAJB2P25686 324 aa13.6□□□□□ -0.23
DDX4-209ENST00000509312 SSTR3P32745 418 aaPredicted RBP13.6□□□□□ -0.23
DDX4-209ENST00000509312 TMEM132AQ24JP5 1023 aa13.6□□□□□ -0.23
DDX4-209ENST00000509312 TMEM134Q9H6X4 195 aa13.6□□□□□ -0.23
DDX4-209ENST00000509312 FAM217BQ9NTX9 383 aaPredicted RBP13.6□□□□□ -0.23
DDX4-209ENST00000509312 PLEKHG3A1L390 1219 aa13.59□□□□□ -0.23
DDX4-209ENST00000509312 POTEMA6NI47 508 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms