RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 PPP1R18Q6NYC8 613 aa10.93□□□□□ -0.66
SNX2-208ENST00000509281 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
SNX2-208ENST00000509281 STK17AQ9UEE5 414 aa10.92□□□□□ -0.66
SNX2-208ENST00000509281 TJAP1Q5JTD0 557 aa10.91□□□□□ -0.66
SNX2-208ENST00000509281 TSR3Q9UJK0 312 aaKnown RBP10.91□□□□□ -0.66
SNX2-208ENST00000509281 COL9A1P20849 921 aa10.9□□□□□ -0.66
SNX2-208ENST00000509281 MYT1Q01538 1121 aa10.9□□□□□ -0.66
SNX2-208ENST00000509281 TAOK2Q9UL54 1235 aa10.9□□□□□ -0.66
SNX2-208ENST00000509281 HPS5Q9UPZ3 1129 aa10.88□□□□□ -0.67
SNX2-208ENST00000509281 TRIM67Q6ZTA4 783 aa10.86□□□□□ -0.67
SNX2-208ENST00000509281 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
SNX2-208ENST00000509281 SEPT9Q9UHD8 586 aaPredicted RBP10.84□□□□□ -0.67
SNX2-208ENST00000509281 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.83□□□□□ -0.68
SNX2-208ENST00000509281 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.83□□□□□ -0.68
SNX2-208ENST00000509281 LRCH3Q96II8 777 aa10.79□□□□□ -0.68
SNX2-208ENST00000509281 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
SNX2-208ENST00000509281 EVI5O60447 810 aa10.78□□□□□ -0.68
SNX2-208ENST00000509281 FAM98CQ17RN3 349 aaKnown RBP10.78□□□□□ -0.68
SNX2-208ENST00000509281 DGAT1O75907 488 aa10.77□□□□□ -0.69
SNX2-208ENST00000509281 MTRQ99707 1265 aa10.77□□□□□ -0.69
SNX2-208ENST00000509281 WIPF1O43516 503 aa10.76□□□□□ -0.69
SNX2-208ENST00000509281 PKDCCQ504Y2 493 aa10.76□□□□□ -0.69
SNX2-208ENST00000509281 IL21Q9HBE4 155 aa10.75□□□□□ -0.69
SNX2-208ENST00000509281 PCDHGA10Q9Y5H3 936 aa10.75□□□□□ -0.69
SNX2-208ENST00000509281 WFS1O76024 890 aa10.73□□□□□ -0.69
SNX2-208ENST00000509281 ZNF516Q92618 1163 aa10.73□□□□□ -0.69
SNX2-208ENST00000509281 INSM1Q01101 510 aaPredicted RBP10.69□□□□□ -0.7
SNX2-208ENST00000509281 PPP1R15BQ5SWA1 713 aa10.69□□□□□ -0.7
SNX2-208ENST00000509281 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
SNX2-208ENST00000509281 NFX1Q12986 1120 aaKnown RBP10.68□□□□□ -0.7
SNX2-208ENST00000509281 CRISPLD2Q9H0B8 497 aa10.68□□□□□ -0.7
SNX2-208ENST00000509281 PPP4CP60510 307 aa10.67□□□□□ -0.7
SNX2-208ENST00000509281 NKX2-3Q8TAU0 364 aa10.67□□□□□ -0.7
SNX2-208ENST00000509281 EMID1Q96A84 441 aaPredicted RBP10.67□□□□□ -0.7
SNX2-208ENST00000509281 ST8SIA5O15466 376 aa10.66□□□□□ -0.7
SNX2-208ENST00000509281 PRR20EP86478 221 aa10.66□□□□□ -0.7
SNX2-208ENST00000509281 PRR20CP86479 221 aa10.66□□□□□ -0.7
SNX2-208ENST00000509281 PRR20DP86480 221 aa10.66□□□□□ -0.7
SNX2-208ENST00000509281 PRR20BP86481 221 aa10.66□□□□□ -0.7
SNX2-208ENST00000509281 PRR20AP86496 221 aa10.66□□□□□ -0.7
SNX2-208ENST00000509281 LCE2CQ5TA81 110 aa10.65□□□□□ -0.7
SNX2-208ENST00000509281 AAASQ9NRG9 546 aa10.64□□□□□ -0.71
SNX2-208ENST00000509281 SUZ12Q15022 739 aaKnown RBP10.63□□□□□ -0.71
SNX2-208ENST00000509281 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
SNX2-208ENST00000509281 TYW1BQ6NUM6 668 aa10.61□□□□□ -0.71
SNX2-208ENST00000509281 FAM187AA6NFU0 413 aa10.6□□□□□ -0.71
SNX2-208ENST00000509281 TMUB1Q9BVT8 246 aa10.59□□□□□ -0.71
SNX2-208ENST00000509281 PHF14O94880 888 aa10.57□□□□□ -0.72
SNX2-208ENST00000509281 GGCXP38435 758 aa10.57□□□□□ -0.72
SNX2-208ENST00000509281 C6orf132Q5T0Z8 1188 aa10.56□□□□□ -0.72
SNX2-208ENST00000509281 SLC19A1P41440 591 aa10.55□□□□□ -0.72
SNX2-208ENST00000509281 SPRYD7Q5W111 196 aa10.55□□□□□ -0.72
SNX2-208ENST00000509281 SAMD7Q7Z3H4 446 aa10.54□□□□□ -0.72
SNX2-208ENST00000509281 GDF9O60383 454 aa10.53□□□□□ -0.72
SNX2-208ENST00000509281 ZNF598Q86UK7 904 aaKnown RBP10.53□□□□□ -0.72
SNX2-208ENST00000509281 APLP1P51693 650 aa10.52□□□□□ -0.73
SNX2-208ENST00000509281 DACH1Q9UI36 760 aa10.52□□□□□ -0.73
SNX2-208ENST00000509281 NCKAP5LQ9HCH0 1330 aa10.52□□□□□ -0.73
SNX2-208ENST00000509281 TSKSQ9UJT2 592 aa10.51□□□□□ -0.73
SNX2-208ENST00000509281 RGL2O15211 777 aa10.49□□□□□ -0.73
SNX2-208ENST00000509281 MAP3K9P80192 1104 aa10.49□□□□□ -0.73
SNX2-208ENST00000509281 CRIPAKQ8N1N5 446 aa10.49□□□□□ -0.73
SNX2-208ENST00000509281 GMPR2Q9P2T1 348 aaKnown RBP10.49□□□□□ -0.73
SNX2-208ENST00000509281 RNF223E7ERA6 249 aa10.48□□□□□ -0.73
SNX2-208ENST00000509281 TNFRSF10AO00220 468 aa10.48□□□□□ -0.73
SNX2-208ENST00000509281 EMILIN3Q9NT22 766 aa10.46□□□□□ -0.73
SNX2-208ENST00000509281 ZNF697Q5TEC3 545 aa10.45□□□□□ -0.74
SNX2-208ENST00000509281 ECM2O94769 699 aaPredicted RBP10.44□□□□□ -0.74
SNX2-208ENST00000509281 COPS2P61201 443 aa10.43□□□□□ -0.74
SNX2-208ENST00000509281 C11orf95C9JLR9 678 aaPredicted RBP10.42□□□□□ -0.74
SNX2-208ENST00000509281 LORP23490 312 aaPredicted RBP10.42□□□□□ -0.74
SNX2-208ENST00000509281 LIAT1Q6ZQX7 453 aa10.42□□□□□ -0.74
SNX2-208ENST00000509281 PACS2Q86VP3 889 aa10.42□□□□□ -0.74
SNX2-208ENST00000509281 EPAS1Q99814 870 aa10.42□□□□□ -0.74
SNX2-208ENST00000509281 SMAPO00193 183 aa10.41□□□□□ -0.74
SNX2-208ENST00000509281 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
SNX2-208ENST00000509281 ZPR1O75312 459 aa10.39□□□□□ -0.75
SNX2-208ENST00000509281 PDE4AP27815 886 aa10.38□□□□□ -0.75
SNX2-208ENST00000509281 TERTO14746 1132 aaKnown RBP10.37□□□□□ -0.75
SNX2-208ENST00000509281 AVPP01185 164 aa10.37□□□□□ -0.75
SNX2-208ENST00000509281 FAM198AQ9UFP1 575 aa10.37□□□□□ -0.75
SNX2-208ENST00000509281 FAM181BA6NEQ2 426 aa10.36□□□□□ -0.75
SNX2-208ENST00000509281 ANKLE1Q8NAG6 615 aa10.36□□□□□ -0.75
SNX2-208ENST00000509281 RBM33Q96EV2 1170 aaKnown RBP10.34□□□□□ -0.75
SNX2-208ENST00000509281 MFSD10Q14728 455 aa10.33□□□□□ -0.76
SNX2-208ENST00000509281 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
SNX2-208ENST00000509281 PKD2L1Q9P0L9 805 aa10.32□□□□□ -0.76
SNX2-208ENST00000509281 PPEF1O14829 653 aaPredicted RBP10.31□□□□□ -0.76
SNX2-208ENST00000509281 RNF40O75150 1001 aa10.31□□□□□ -0.76
SNX2-208ENST00000509281 AXIN1O15169 862 aa10.29□□□□□ -0.76
SNX2-208ENST00000509281 TSR1Q2NL82 804 aaKnown RBP10.29□□□□□ -0.76
SNX2-208ENST00000509281 SMCPP49901 116 aaPredicted RBP10.28□□□□□ -0.76
SNX2-208ENST00000509281 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
SNX2-208ENST00000509281 TLL1O43897 1013 aa10.27□□□□□ -0.77
SNX2-208ENST00000509281 HS6ST3Q8IZP7 471 aa10.27□□□□□ -0.77
SNX2-208ENST00000509281 CDCA7LQ96GN5 454 aa10.27□□□□□ -0.77
SNX2-208ENST00000509281 SNRPBP14678 240 aaKnown RBP10.26□□□□□ -0.77
SNX2-208ENST00000509281 CTC1Q2NKJ3 1217 aa10.26□□□□□ -0.77
SNX2-208ENST00000509281 ZSCAN1Q8NBB4 408 aa10.26□□□□□ -0.77
SNX2-208ENST00000509281 TATDN2Q93075 761 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms