RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 LAPTM4BQ86VI4 370 aa10.38□□□□□ -0.75
GYPB-209ENST00000508618 ONECUT3O60422 494 aaPredicted RBP10.37□□□□□ -0.75
GYPB-209ENST00000508618 EPAS1Q99814 870 aa10.37□□□□□ -0.75
GYPB-209ENST00000508618 COL9A1P20849 921 aa10.36□□□□□ -0.75
GYPB-209ENST00000508618 A0A0G2JS52 829 aa10.35□□□□□ -0.75
GYPB-209ENST00000508618 ANKK1Q8NFD2 765 aa10.35□□□□□ -0.75
GYPB-209ENST00000508618 PROX2Q3B8N5 592 aa10.34□□□□□ -0.75
GYPB-209ENST00000508618 NYAP1Q6ZVC0 841 aa10.33□□□□□ -0.76
GYPB-209ENST00000508618 ITGBL1O95965 494 aaPredicted RBP10.32□□□□□ -0.76
GYPB-209ENST00000508618 DPYSL4O14531 572 aa10.31□□□□□ -0.76
GYPB-209ENST00000508618 SOWAHBA6NEL2 793 aa10.3□□□□□ -0.76
GYPB-209ENST00000508618 C6orf132Q5T0Z8 1188 aa10.3□□□□□ -0.76
GYPB-209ENST00000508618 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
GYPB-209ENST00000508618 PDIA6Q15084 440 aa10.28□□□□□ -0.76
GYPB-209ENST00000508618 TRIM6-TRIM34B2RNG4 842 aa10.27□□□□□ -0.77
GYPB-209ENST00000508618 ZFRQ96KR1 1074 aaKnown RBP10.27□□□□□ -0.77
GYPB-209ENST00000508618 KIAA1468Q9P260 1216 aa10.27□□□□□ -0.77
GYPB-209ENST00000508618 BCAMP50895 628 aa10.25□□□□□ -0.77
GYPB-209ENST00000508618 FAM98CQ17RN3 349 aaKnown RBP10.25□□□□□ -0.77
GYPB-209ENST00000508618 EN1Q05925 392 aaPredicted RBP10.24□□□□□ -0.77
GYPB-209ENST00000508618 SPDYE16A6NNV3 312 aaPredicted RBP10.22□□□□□ -0.77
GYPB-209ENST00000508618 ARIH1Q9Y4X5 557 aaPredicted RBP10.22□□□□□ -0.77
GYPB-209ENST00000508618 DDX12PQ92771 950 aa10.21□□□□□ -0.77
GYPB-209ENST00000508618 IRX2Q9BZI1 471 aaPredicted RBP10.2□□□□□ -0.78
GYPB-209ENST00000508618 SEPT9Q9UHD8 586 aaPredicted RBP10.2□□□□□ -0.78
GYPB-209ENST00000508618 NBR1Q14596 966 aa10.19□□□□□ -0.78
GYPB-209ENST00000508618 RBM33Q96EV2 1170 aaKnown RBP10.19□□□□□ -0.78
GYPB-209ENST00000508618 LRCH3Q96II8 777 aa10.18□□□□□ -0.78
GYPB-209ENST00000508618 WBP1LQ9NX94 342 aa10.18□□□□□ -0.78
GYPB-209ENST00000508618 TSR3Q9UJK0 312 aaKnown RBP10.18□□□□□ -0.78
GYPB-209ENST00000508618 MAP3K7O43318 606 aa10.17□□□□□ -0.78
GYPB-209ENST00000508618 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.17□□□□□ -0.78
GYPB-209ENST00000508618 PACS2Q86VP3 889 aa10.16□□□□□ -0.78
GYPB-209ENST00000508618 SPRYD3Q8NCJ5 442 aa10.16□□□□□ -0.78
GYPB-209ENST00000508618 CERKQ8TCT0 537 aa10.16□□□□□ -0.78
GYPB-209ENST00000508618 KCNC4Q03721 635 aa10.15□□□□□ -0.78
GYPB-209ENST00000508618 TSR1Q2NL82 804 aaKnown RBP10.15□□□□□ -0.78
GYPB-209ENST00000508618 TSKSQ9UJT2 592 aa10.15□□□□□ -0.78
GYPB-209ENST00000508618 E2F4Q16254 413 aa10.13□□□□□ -0.79
GYPB-209ENST00000508618 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.13□□□□□ -0.79
GYPB-209ENST00000508618 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
GYPB-209ENST00000508618 PRSS12P56730 875 aa10.11□□□□□ -0.79
GYPB-209ENST00000508618 RBM27Q9P2N5 1060 aaKnown RBP10.11□□□□□ -0.79
GYPB-209ENST00000508618 CDCA7LQ96GN5 454 aa10.1□□□□□ -0.79
GYPB-209ENST00000508618 NBPF26B4DH59 902 aa10.09□□□□□ -0.79
GYPB-209ENST00000508618 AMER1Q5JTC6 1135 aaPredicted RBP10.08□□□□□ -0.8
GYPB-209ENST00000508618 PRIM1P49642 420 aaKnown RBP10.06□□□□□ -0.8
GYPB-209ENST00000508618 PPP4CP60510 307 aa10.05□□□□□ -0.8
GYPB-209ENST00000508618 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
GYPB-209ENST00000508618 OSBPP22059 807 aa10.03□□□□□ -0.8
GYPB-209ENST00000508618 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
GYPB-209ENST00000508618 TATDN2Q93075 761 aa10.03□□□□□ -0.8
GYPB-209ENST00000508618 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
GYPB-209ENST00000508618 GRXCR2A6NFK2 248 aa10.01□□□□□ -0.81
GYPB-209ENST00000508618 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
GYPB-209ENST00000508618 SMAPO00193 183 aa10□□□□□ -0.81
GYPB-209ENST00000508618 LAPTM4AQ15012 233 aa10□□□□□ -0.81
GYPB-209ENST00000508618 TTC13Q8NBP0 860 aa10□□□□□ -0.81
GYPB-209ENST00000508618 NECTIN2Q92692 538 aa10□□□□□ -0.81
GYPB-209ENST00000508618 CDHR5Q9HBB8 845 aa10□□□□□ -0.81
GYPB-209ENST00000508618 PNMA3Q9UL41 463 aa10□□□□□ -0.81
GYPB-209ENST00000508618 C3orf80F5H4A9 247 aa9.98□□□□□ -0.81
GYPB-209ENST00000508618 PAXIP1Q6ZW49 1069 aaPredicted RBP9.98□□□□□ -0.81
GYPB-209ENST00000508618 IL21Q9HBE4 155 aa9.98□□□□□ -0.81
GYPB-209ENST00000508618 MTRQ99707 1265 aa9.97□□□□□ -0.81
GYPB-209ENST00000508618 NUDT18Q6ZVK8 323 aa9.96□□□□□ -0.82
GYPB-209ENST00000508618 CFAP44Q96MT7 982 aa9.95□□□□□ -0.82
GYPB-209ENST00000508618 HDGFP51858 240 aaKnown RBP9.94□□□□□ -0.82
GYPB-209ENST00000508618 Q6ZNB5 142 aa9.94□□□□□ -0.82
GYPB-209ENST00000508618 NPDC1Q9NQX5 325 aaPredicted RBP9.93□□□□□ -0.82
GYPB-209ENST00000508618 APLP1P51693 650 aa9.92□□□□□ -0.82
GYPB-209ENST00000508618 PADI6Q6TGC4 694 aa9.92□□□□□ -0.82
GYPB-209ENST00000508618 SLF2Q8IX21 1173 aa9.92□□□□□ -0.82
GYPB-209ENST00000508618 RTN4Q9NQC3 1192 aaKnown RBP9.92□□□□□ -0.82
GYPB-209ENST00000508618 V9GY48 417 aaPredicted RBP9.92□□□□□ -0.82
GYPB-209ENST00000508618 RNF40O75150 1001 aa9.89□□□□□ -0.83
GYPB-209ENST00000508618 SLC4A3P48751 1232 aa9.88□□□□□ -0.83
GYPB-209ENST00000508618 SWT1Q5T5J6 900 aaKnown RBP9.88□□□□□ -0.83
GYPB-209ENST00000508618 PPP1R18Q6NYC8 613 aa9.88□□□□□ -0.83
GYPB-209ENST00000508618 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
GYPB-209ENST00000508618 PRR14Q9BWN1 585 aa9.88□□□□□ -0.83
GYPB-209ENST00000508618 PRKD2Q9BZL6 878 aa9.88□□□□□ -0.83
GYPB-209ENST00000508618 EYA1Q99502 592 aa9.87□□□□□ -0.83
GYPB-209ENST00000508618 NRG2O14511 850 aaPredicted RBP9.86□□□□□ -0.83
GYPB-209ENST00000508618 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.86□□□□□ -0.83
GYPB-209ENST00000508618 ZNF516Q92618 1163 aa9.85□□□□□ -0.83
GYPB-209ENST00000508618 GFRA3O60609 400 aa9.84□□□□□ -0.83
GYPB-209ENST00000508618 GGCXP38435 758 aa9.84□□□□□ -0.83
GYPB-209ENST00000508618 LCE2BO14633 110 aa9.83□□□□□ -0.84
GYPB-209ENST00000508618 TMUB1Q9BVT8 246 aa9.83□□□□□ -0.84
GYPB-209ENST00000508618 PTGDRQ13258 359 aa9.82□□□□□ -0.84
GYPB-209ENST00000508618 DNAJB2P25686 324 aa9.8□□□□□ -0.84
GYPB-209ENST00000508618 MLLT3P42568 568 aaPredicted RBP9.8□□□□□ -0.84
GYPB-209ENST00000508618 KCNV2Q8TDN2 545 aa9.8□□□□□ -0.84
GYPB-209ENST00000508618 ZPR1O75312 459 aa9.79□□□□□ -0.84
GYPB-209ENST00000508618 COPS2P61201 443 aa9.79□□□□□ -0.84
GYPB-209ENST00000508618 TRAF7Q6Q0C0 670 aa9.79□□□□□ -0.84
GYPB-209ENST00000508618 NKX2-3Q8TAU0 364 aa9.78□□□□□ -0.84
GYPB-209ENST00000508618 RBM46Q8TBY0 533 aaKnown RBP9.78□□□□□ -0.84
GYPB-209ENST00000508618 TMEM134Q9H6X4 195 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms