RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
SMG7-214ENST00000508461 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
SMG7-214ENST00000508461 SAFB2Q14151 953 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMG7-214ENST00000508461 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.93■□□□□ 0.3
SMG7-214ENST00000508461 DISP1Q96F81 1524 aa16.92■□□□□ 0.3
SMG7-214ENST00000508461 RAPGEF6Q8TEU7 1601 aa16.92■□□□□ 0.3
SMG7-214ENST00000508461 SYNJ2O15056 1496 aa16.92■□□□□ 0.3
SMG7-214ENST00000508461 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
SMG7-214ENST00000508461 NUTM2DQ5VT03 806 aaPredicted RBP16.91■□□□□ 0.3
SMG7-214ENST00000508461 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
SMG7-214ENST00000508461 FANCIQ9NVI1 1328 aa16.9■□□□□ 0.3
SMG7-214ENST00000508461 KIAA0556O60303 1618 aa16.9■□□□□ 0.3
SMG7-214ENST00000508461 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
SMG7-214ENST00000508461 ARHGAP5Q13017 1502 aa16.89■□□□□ 0.3
SMG7-214ENST00000508461 FRAT1Q92837 279 aaPredicted RBP16.88■□□□□ 0.29
SMG7-214ENST00000508461 ARID4BQ4LE39 1312 aaPredicted RBP16.88■□□□□ 0.29
SMG7-214ENST00000508461 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
SMG7-214ENST00000508461 PZPP20742 1482 aa16.86■□□□□ 0.29
SMG7-214ENST00000508461 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
SMG7-214ENST00000508461 TEX14Q8IWB6 1497 aa16.85■□□□□ 0.29
SMG7-214ENST00000508461 DEKP35659 375 aaKnown RBP16.85■□□□□ 0.29
SMG7-214ENST00000508461 KANK1Q14678 1352 aa16.84■□□□□ 0.29
SMG7-214ENST00000508461 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
SMG7-214ENST00000508461 ATP10BO94823 1461 aa16.84■□□□□ 0.29
SMG7-214ENST00000508461 BRD4O60885 1362 aaPredicted RBP16.84■□□□□ 0.29
SMG7-214ENST00000508461 DENND4BO75064 1496 aaPredicted RBP16.84■□□□□ 0.29
SMG7-214ENST00000508461 TRAK1Q9UPV9 953 aa16.83■□□□□ 0.29
SMG7-214ENST00000508461 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.28
SMG7-214ENST00000508461 SKAP1Q86WV1 359 aa16.83■□□□□ 0.28
SMG7-214ENST00000508461 SMG6Q86US8 1419 aaKnown RBP16.82■□□□□ 0.28
SMG7-214ENST00000508461 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
SMG7-214ENST00000508461 PDE3BQ13370 1112 aa16.82■□□□□ 0.28
SMG7-214ENST00000508461 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
SMG7-214ENST00000508461 DNMT1P26358 1616 aaKnown RBP16.81■□□□□ 0.28
SMG7-214ENST00000508461 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
SMG7-214ENST00000508461 KIF14Q15058 1648 aa16.8■□□□□ 0.28
SMG7-214ENST00000508461 NEFMP07197 916 aa16.8■□□□□ 0.28
SMG7-214ENST00000508461 GOLGA2Q08379 1002 aa16.8■□□□□ 0.28
SMG7-214ENST00000508461 STK26Q9P289 416 aa16.8■□□□□ 0.28
SMG7-214ENST00000508461 GCC2Q8IWJ2 1684 aa16.8■□□□□ 0.28
SMG7-214ENST00000508461 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
SMG7-214ENST00000508461 APAF1O14727 1248 aa16.79■□□□□ 0.28
SMG7-214ENST00000508461 MORC1Q86VD1 984 aa16.79■□□□□ 0.28
SMG7-214ENST00000508461 DHX29Q7Z478 1369 aaKnown RBP16.79■□□□□ 0.28
SMG7-214ENST00000508461 PPM1GO15355 546 aaPredicted RBP16.79■□□□□ 0.28
SMG7-214ENST00000508461 PDE4AP27815 886 aa16.79■□□□□ 0.28
SMG7-214ENST00000508461 TCERG1O14776 1098 aaKnown RBP16.78■□□□□ 0.28
SMG7-214ENST00000508461 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
SMG7-214ENST00000508461 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
SMG7-214ENST00000508461 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
SMG7-214ENST00000508461 U2SURPO15042 1029 aaKnown RBP16.76■□□□□ 0.27
SMG7-214ENST00000508461 PLEKHH2Q8IVE3 1493 aa16.76■□□□□ 0.27
SMG7-214ENST00000508461 SLC4A3P48751 1232 aa16.75■□□□□ 0.27
SMG7-214ENST00000508461 SPATA31E1Q6ZUB1 1445 aa16.75■□□□□ 0.27
SMG7-214ENST00000508461 KDM5BQ9UGL1 1544 aa16.74■□□□□ 0.27
SMG7-214ENST00000508461 DISP3Q9P2K9 1392 aa16.73■□□□□ 0.27
SMG7-214ENST00000508461 PPP2R1AP30153 589 aa16.73■□□□□ 0.27
SMG7-214ENST00000508461 ARXQ96QS3 562 aa16.73■□□□□ 0.27
SMG7-214ENST00000508461 BCL2L13Q9BXK5 485 aa16.73■□□□□ 0.27
SMG7-214ENST00000508461 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
SMG7-214ENST00000508461 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
SMG7-214ENST00000508461 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
SMG7-214ENST00000508461 ERBINQ96RT1 1412 aa16.71■□□□□ 0.27
SMG7-214ENST00000508461 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.27
SMG7-214ENST00000508461 ITSN2Q9NZM3 1697 aa16.71■□□□□ 0.26
SMG7-214ENST00000508461 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
SMG7-214ENST00000508461 RTN4Q9NQC3 1192 aaKnown RBP16.7■□□□□ 0.26
SMG7-214ENST00000508461 RALGAPBQ86X10 1494 aa16.69■□□□□ 0.26
SMG7-214ENST00000508461 DDRGK1Q96HY6 314 aa16.69■□□□□ 0.26
SMG7-214ENST00000508461 EIF3AQ14152 1382 aaKnown RBP16.69■□□□□ 0.26
SMG7-214ENST00000508461 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
SMG7-214ENST00000508461 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.262e-8■■□□□ 12.3
SMG7-214ENST00000508461 C20orf194Q5TEA3 1177 aa16.69■□□□□ 0.26
SMG7-214ENST00000508461 WASHC2CQ9Y4E1 1318 aa16.69■□□□□ 0.26
SMG7-214ENST00000508461 POGKQ9P215 609 aa16.69■□□□□ 0.26
SMG7-214ENST00000508461 SCAPERQ9BY12 1400 aa16.67■□□□□ 0.26
SMG7-214ENST00000508461 SYCP2Q9BX26 1530 aa16.67■□□□□ 0.26
SMG7-214ENST00000508461 UPF2Q9HAU5 1272 aaKnown RBP16.66■□□□□ 0.26
SMG7-214ENST00000508461 FTSJ3Q8IY81 847 aaKnown RBP16.66■□□□□ 0.26
SMG7-214ENST00000508461 MLECQ14165 292 aa16.66■□□□□ 0.26
SMG7-214ENST00000508461 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
SMG7-214ENST00000508461 FAM135AQ9P2D6 1515 aa16.64■□□□□ 0.25
SMG7-214ENST00000508461 TESK2Q96S53 571 aa16.64■□□□□ 0.25
SMG7-214ENST00000508461 NUP160Q12769 1436 aa16.64■□□□□ 0.25
SMG7-214ENST00000508461 SLC24A1O60721 1099 aa16.63■□□□□ 0.25
SMG7-214ENST00000508461 PRAG1Q86YV5 1406 aa16.63■□□□□ 0.25
SMG7-214ENST00000508461 ADGRL2O95490 1459 aa16.62■□□□□ 0.25
SMG7-214ENST00000508461 BCAR3O75815 825 aa16.62■□□□□ 0.25
SMG7-214ENST00000508461 ESF1Q9H501 851 aaKnown RBP16.62■□□□□ 0.25
SMG7-214ENST00000508461 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
SMG7-214ENST00000508461 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
SMG7-214ENST00000508461 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
SMG7-214ENST00000508461 CENPJQ9HC77 1338 aaPredicted RBP16.61■□□□□ 0.25
SMG7-214ENST00000508461 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
SMG7-214ENST00000508461 PANK1Q8TE04 598 aa16.59■□□□□ 0.25
SMG7-214ENST00000508461 CENPQQ7L2Z9 268 aaPredicted RBP16.58■□□□□ 0.25
SMG7-214ENST00000508461 ADGRF5Q8IZF2 1346 aa16.58■□□□□ 0.24
SMG7-214ENST00000508461 E9PSI1 815 aa16.57■□□□□ 0.24
SMG7-214ENST00000508461 UHRF1BP1Q6BDS2 1440 aa16.57■□□□□ 0.24
SMG7-214ENST00000508461 PARD3Q8TEW0 1356 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms