RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 ARIH1Q9Y4X5 557 aaPredicted RBP11.66□□□□□ -0.54
USO1-202ENST00000508454 E2F4Q16254 413 aa11.65□□□□□ -0.54
USO1-202ENST00000508454 HCSTQ9UBK5 93 aa11.65□□□□□ -0.54
USO1-202ENST00000508454 EPAS1Q99814 870 aa11.64□□□□□ -0.55
USO1-202ENST00000508454 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
USO1-202ENST00000508454 C6orf132Q5T0Z8 1188 aa11.62□□□□□ -0.55
USO1-202ENST00000508454 TSHZ2Q9NRE2 1034 aa11.62□□□□□ -0.55
USO1-202ENST00000508454 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
USO1-202ENST00000508454 SPDYE16A6NNV3 312 aaPredicted RBP11.58□□□□□ -0.56
USO1-202ENST00000508454 EN1Q05925 392 aaPredicted RBP11.58□□□□□ -0.56
USO1-202ENST00000508454 TSR1Q2NL82 804 aaKnown RBP11.58□□□□□ -0.56
USO1-202ENST00000508454 RABGEF1Q9UJ41 708 aa11.58□□□□□ -0.56
USO1-202ENST00000508454 NBR1Q14596 966 aa11.57□□□□□ -0.56
USO1-202ENST00000508454 THSD4Q6ZMP0 1018 aa11.57□□□□□ -0.56
USO1-202ENST00000508454 MRPL50Q8N5N7 158 aaKnown RBP11.57□□□□□ -0.56
USO1-202ENST00000508454 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
USO1-202ENST00000508454 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
USO1-202ENST00000508454 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
USO1-202ENST00000508454 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
USO1-202ENST00000508454 WNT2BQ93097 391 aa11.53□□□□□ -0.56
USO1-202ENST00000508454 KIAA1468Q9P260 1216 aa11.53□□□□□ -0.56
USO1-202ENST00000508454 PTPN5P54829 565 aa11.52□□□□□ -0.57
USO1-202ENST00000508454 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
USO1-202ENST00000508454 MAP3K7O43318 606 aa11.5□□□□□ -0.57
USO1-202ENST00000508454 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
USO1-202ENST00000508454 OSBPP22059 807 aa11.5□□□□□ -0.57
USO1-202ENST00000508454 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
USO1-202ENST00000508454 FAM198AQ9UFP1 575 aa11.49□□□□□ -0.57
USO1-202ENST00000508454 SEPT9Q9UHD8 586 aaPredicted RBP11.49□□□□□ -0.57
USO1-202ENST00000508454 GRXCR2A6NFK2 248 aa11.48□□□□□ -0.57
USO1-202ENST00000508454 KCNV2Q8TDN2 545 aa11.48□□□□□ -0.57
USO1-202ENST00000508454 C3orf80F5H4A9 247 aa11.47□□□□□ -0.57
USO1-202ENST00000508454 LAPTM4BQ86VI4 370 aa11.47□□□□□ -0.57
USO1-202ENST00000508454 CDHR5Q9HBB8 845 aa11.47□□□□□ -0.57
USO1-202ENST00000508454 GOLGA8CPA6NN73 597 aa11.46□□□□□ -0.57
USO1-202ENST00000508454 BCAMP50895 628 aa11.45□□□□□ -0.58
USO1-202ENST00000508454 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
USO1-202ENST00000508454 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
USO1-202ENST00000508454 ANKK1Q8NFD2 765 aa11.42□□□□□ -0.58
USO1-202ENST00000508454 MLLT3P42568 568 aaPredicted RBP11.41□□□□□ -0.58
USO1-202ENST00000508454 CDCA7LQ96GN5 454 aa11.41□□□□□ -0.58
USO1-202ENST00000508454 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
USO1-202ENST00000508454 PRSS12P56730 875 aa11.4□□□□□ -0.58
USO1-202ENST00000508454 FAM98CQ17RN3 349 aaKnown RBP11.4□□□□□ -0.58
USO1-202ENST00000508454 ARHGEF1Q92888 912 aaKnown RBP11.4□□□□□ -0.58
USO1-202ENST00000508454 NPDC1Q9NQX5 325 aaPredicted RBP11.4□□□□□ -0.58
USO1-202ENST00000508454 SMAPO00193 183 aa11.37□□□□□ -0.59
USO1-202ENST00000508454 IFFO2Q5TF58 517 aa11.37□□□□□ -0.59
USO1-202ENST00000508454 TTC13Q8NBP0 860 aa11.36□□□□□ -0.59
USO1-202ENST00000508454 WBP1LQ9NX94 342 aa11.36□□□□□ -0.59
USO1-202ENST00000508454 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
USO1-202ENST00000508454 PACS2Q86VP3 889 aa11.35□□□□□ -0.59
USO1-202ENST00000508454 CERKQ8TCT0 537 aa11.35□□□□□ -0.59
USO1-202ENST00000508454 RBM27Q9P2N5 1060 aaKnown RBP11.33□□□□□ -0.6
USO1-202ENST00000508454 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
USO1-202ENST00000508454 TATDN2Q93075 761 aa11.31□□□□□ -0.6
USO1-202ENST00000508454 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
USO1-202ENST00000508454 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
USO1-202ENST00000508454 LRCH3Q96II8 777 aa11.29□□□□□ -0.6
USO1-202ENST00000508454 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
USO1-202ENST00000508454 A0A0G2JS52 829 aa11.28□□□□□ -0.6
USO1-202ENST00000508454 SAMD7Q7Z3H4 446 aa11.28□□□□□ -0.6
USO1-202ENST00000508454 TSR3Q9UJK0 312 aaKnown RBP11.28□□□□□ -0.6
USO1-202ENST00000508454 PNMA3Q9UL41 463 aa11.28□□□□□ -0.6
USO1-202ENST00000508454 NBPF26B4DH59 902 aa11.27□□□□□ -0.61
USO1-202ENST00000508454 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
USO1-202ENST00000508454 NYAP1Q6ZVC0 841 aa11.26□□□□□ -0.61
USO1-202ENST00000508454 SEMA3EO15041 775 aa11.25□□□□□ -0.61
USO1-202ENST00000508454 PTGDRQ13258 359 aa11.23□□□□□ -0.61
USO1-202ENST00000508454 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
USO1-202ENST00000508454 EYA1Q99502 592 aa11.22□□□□□ -0.61
USO1-202ENST00000508454 PPP4CP60510 307 aa11.18□□□□□ -0.62
USO1-202ENST00000508454 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
USO1-202ENST00000508454 TESPA1A2RU30 521 aaPredicted RBP11.16□□□□□ -0.62
USO1-202ENST00000508454 TJAP1Q5JTD0 557 aa11.16□□□□□ -0.62
USO1-202ENST00000508454 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
USO1-202ENST00000508454 APLP1P51693 650 aa11.15□□□□□ -0.62
USO1-202ENST00000508454 KCNC4Q03721 635 aa11.15□□□□□ -0.62
USO1-202ENST00000508454 RGS20O76081 388 aa11.14□□□□□ -0.63
USO1-202ENST00000508454 ADGRG1Q9Y653 693 aa11.14□□□□□ -0.63
USO1-202ENST00000508454 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
USO1-202ENST00000508454 NUTM2FA1L443 756 aa11.12□□□□□ -0.63
USO1-202ENST00000508454 RBM26Q5T8P6 1007 aaKnown RBP11.11□□□□□ -0.63
USO1-202ENST00000508454 MTRQ99707 1265 aa11.11□□□□□ -0.63
USO1-202ENST00000508454 GPR37O15354 613 aa11.1□□□□□ -0.63
USO1-202ENST00000508454 RNF40O75150 1001 aa11.1□□□□□ -0.63
USO1-202ENST00000508454 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
USO1-202ENST00000508454 ZNF516Q92618 1163 aa11.08□□□□□ -0.64
USO1-202ENST00000508454 FCHSD2O94868 740 aa11.07□□□□□ -0.64
USO1-202ENST00000508454 SLF2Q8IX21 1173 aa11.06□□□□□ -0.64
USO1-202ENST00000508454 TMEM134Q9H6X4 195 aa11.06□□□□□ -0.64
USO1-202ENST00000508454 FECHP22830 423 aa11.05□□□□□ -0.64
USO1-202ENST00000508454 DNAJB2P25686 324 aa11.05□□□□□ -0.64
USO1-202ENST00000508454 RCCD1A6NED2 376 aa11.04□□□□□ -0.64
USO1-202ENST00000508454 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
USO1-202ENST00000508454 IL21Q9HBE4 155 aa11.04□□□□□ -0.64
USO1-202ENST00000508454 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
USO1-202ENST00000508454 PXYLP1Q8TE99 480 aa11.02□□□□□ -0.65
USO1-202ENST00000508454 HIC1Q14526 733 aa11.01□□□□□ -0.65
USO1-202ENST00000508454 NKX2-3Q8TAU0 364 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms