RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RABGEF1Q9UJ41 708 aa13.8□□□□□ -0.2
TRAPPC13-209ENST00000508304 DPYSL4O14531 572 aa13.77□□□□□ -0.21
TRAPPC13-209ENST00000508304 BBXQ8WY36 941 aaPredicted RBP13.76□□□□□ -0.21
TRAPPC13-209ENST00000508304 EPAS1Q99814 870 aa13.75□□□□□ -0.21
TRAPPC13-209ENST00000508304 C6orf132Q5T0Z8 1188 aa13.72□□□□□ -0.21
TRAPPC13-209ENST00000508304 LAPTM4BQ86VI4 370 aa13.71□□□□□ -0.21
TRAPPC13-209ENST00000508304 ONECUT3O60422 494 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC13-209ENST00000508304 ANKK1Q8NFD2 765 aa13.7□□□□□ -0.22
TRAPPC13-209ENST00000508304 KIAA1468Q9P260 1216 aa13.69□□□□□ -0.22
TRAPPC13-209ENST00000508304 A0A0G2JS52 829 aa13.67□□□□□ -0.22
TRAPPC13-209ENST00000508304 RGS20O76081 388 aa13.67□□□□□ -0.22
TRAPPC13-209ENST00000508304 BCAMP50895 628 aa13.65□□□□□ -0.22
TRAPPC13-209ENST00000508304 DDX12PQ92771 950 aa13.65□□□□□ -0.22
TRAPPC13-209ENST00000508304 SOWAHBA6NEL2 793 aa13.64□□□□□ -0.23
TRAPPC13-209ENST00000508304 TRIM6-TRIM34B2RNG4 842 aa13.64□□□□□ -0.23
TRAPPC13-209ENST00000508304 RBM33Q96EV2 1170 aaKnown RBP13.64□□□□□ -0.23
TRAPPC13-209ENST00000508304 ZFRQ96KR1 1074 aaKnown RBP13.64□□□□□ -0.23
TRAPPC13-209ENST00000508304 PDIA6Q15084 440 aa13.63□□□□□ -0.23
TRAPPC13-209ENST00000508304 ITGBL1O95965 494 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC13-209ENST00000508304 SEPT9Q9UHD8 586 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC13-209ENST00000508304 EN1Q05925 392 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC13-209ENST00000508304 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
TRAPPC13-209ENST00000508304 NBR1Q14596 966 aa13.58□□□□□ -0.24
TRAPPC13-209ENST00000508304 NYAP1Q6ZVC0 841 aa13.58□□□□□ -0.24
TRAPPC13-209ENST00000508304 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC13-209ENST00000508304 FAM98CQ17RN3 349 aaKnown RBP13.57□□□□□ -0.24
TRAPPC13-209ENST00000508304 TSR1Q2NL82 804 aaKnown RBP13.56□□□□□ -0.24
TRAPPC13-209ENST00000508304 WBP1LQ9NX94 342 aa13.55□□□□□ -0.24
TRAPPC13-209ENST00000508304 MAP3K7O43318 606 aa13.54□□□□□ -0.24
TRAPPC13-209ENST00000508304 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC13-209ENST00000508304 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
TRAPPC13-209ENST00000508304 ARIH1Q9Y4X5 557 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC13-209ENST00000508304 E2F4Q16254 413 aa13.52□□□□□ -0.25
TRAPPC13-209ENST00000508304 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC13-209ENST00000508304 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC13-209ENST00000508304 PACS2Q86VP3 889 aa13.49□□□□□ -0.25
TRAPPC13-209ENST00000508304 LRCH3Q96II8 777 aa13.49□□□□□ -0.25
TRAPPC13-209ENST00000508304 TSR3Q9UJK0 312 aaKnown RBP13.49□□□□□ -0.25
TRAPPC13-209ENST00000508304 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
TRAPPC13-209ENST00000508304 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC13-209ENST00000508304 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
TRAPPC13-209ENST00000508304 CDCA7LQ96GN5 454 aa13.46□□□□□ -0.25
TRAPPC13-209ENST00000508304 KCNC4Q03721 635 aa13.45□□□□□ -0.26
TRAPPC13-209ENST00000508304 PRSS12P56730 875 aa13.44□□□□□ -0.26
TRAPPC13-209ENST00000508304 PAXIP1Q6ZW49 1069 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC13-209ENST00000508304 CERKQ8TCT0 537 aa13.44□□□□□ -0.26
TRAPPC13-209ENST00000508304 FAM198AQ9UFP1 575 aa13.44□□□□□ -0.26
TRAPPC13-209ENST00000508304 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
TRAPPC13-209ENST00000508304 GRXCR2A6NFK2 248 aa13.42□□□□□ -0.26
TRAPPC13-209ENST00000508304 WDR70Q9NW82 654 aa13.42□□□□□ -0.26
TRAPPC13-209ENST00000508304 SMAPO00193 183 aa13.4□□□□□ -0.26
TRAPPC13-209ENST00000508304 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
TRAPPC13-209ENST00000508304 OSBPP22059 807 aa13.39□□□□□ -0.27
TRAPPC13-209ENST00000508304 C3orf80F5H4A9 247 aa13.38□□□□□ -0.27
TRAPPC13-209ENST00000508304 PPP4CP60510 307 aa13.37□□□□□ -0.27
TRAPPC13-209ENST00000508304 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
TRAPPC13-209ENST00000508304 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
TRAPPC13-209ENST00000508304 TATDN2Q93075 761 aa13.36□□□□□ -0.27
TRAPPC13-209ENST00000508304 NBPF26B4DH59 902 aa13.35□□□□□ -0.27
TRAPPC13-209ENST00000508304 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
TRAPPC13-209ENST00000508304 PNMA3Q9UL41 463 aa13.34□□□□□ -0.27
TRAPPC13-209ENST00000508304 TJAP1Q5JTD0 557 aa13.3□□□□□ -0.28
TRAPPC13-209ENST00000508304 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
TRAPPC13-209ENST00000508304 TTC13Q8NBP0 860 aa13.28□□□□□ -0.28
TRAPPC13-209ENST00000508304 NPDC1Q9NQX5 325 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC13-209ENST00000508304 MTRQ99707 1265 aa13.24□□□□□ -0.29
TRAPPC13-209ENST00000508304 PADI6Q6TGC4 694 aa13.23□□□□□ -0.29
TRAPPC13-209ENST00000508304 IL21Q9HBE4 155 aa13.23□□□□□ -0.29
TRAPPC13-209ENST00000508304 HDGFP51858 240 aaKnown RBP13.21□□□□□ -0.29
TRAPPC13-209ENST00000508304 APLP1P51693 650 aa13.2□□□□□ -0.3
TRAPPC13-209ENST00000508304 RNF40O75150 1001 aa13.19□□□□□ -0.3
TRAPPC13-209ENST00000508304 Q6ZNB5 142 aa13.18□□□□□ -0.3
TRAPPC13-209ENST00000508304 SWT1Q5T5J6 900 aaKnown RBP13.17□□□□□ -0.3
TRAPPC13-209ENST00000508304 ZNF516Q92618 1163 aa13.16□□□□□ -0.3
TRAPPC13-209ENST00000508304 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
TRAPPC13-209ENST00000508304 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
TRAPPC13-209ENST00000508304 NECTIN2Q92692 538 aa13.15□□□□□ -0.3
TRAPPC13-209ENST00000508304 EYA1Q99502 592 aa13.15□□□□□ -0.3
TRAPPC13-209ENST00000508304 MLLT3P42568 568 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC13-209ENST00000508304 LAPTM4AQ15012 233 aa13.14□□□□□ -0.31
TRAPPC13-209ENST00000508304 SLF2Q8IX21 1173 aa13.14□□□□□ -0.31
TRAPPC13-209ENST00000508304 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
TRAPPC13-209ENST00000508304 KCNV2Q8TDN2 545 aa13.12□□□□□ -0.31
TRAPPC13-209ENST00000508304 PRKD2Q9BZL6 878 aa13.12□□□□□ -0.31
TRAPPC13-209ENST00000508304 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.1□□□□□ -0.31
TRAPPC13-209ENST00000508304 GFRA3O60609 400 aa13.08□□□□□ -0.32
TRAPPC13-209ENST00000508304 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.32
TRAPPC13-209ENST00000508304 V9GY48 417 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC13-209ENST00000508304 PTGDRQ13258 359 aa13.07□□□□□ -0.32
TRAPPC13-209ENST00000508304 LCE2BO14633 110 aa13.06□□□□□ -0.32
TRAPPC13-209ENST00000508304 COPS2P61201 443 aa13.06□□□□□ -0.32
TRAPPC13-209ENST00000508304 SLC4A3P48751 1232 aa13.05□□□□□ -0.32
TRAPPC13-209ENST00000508304 ZPR1O75312 459 aa13.02□□□□□ -0.33
TRAPPC13-209ENST00000508304 PRR14Q9BWN1 585 aa13.02□□□□□ -0.33
TRAPPC13-209ENST00000508304 NRG2O14511 850 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC13-209ENST00000508304 DNAJB2P25686 324 aa13.01□□□□□ -0.33
TRAPPC13-209ENST00000508304 ADGRG1Q9Y653 693 aa13.01□□□□□ -0.33
TRAPPC13-209ENST00000508304 GGCXP38435 758 aa13□□□□□ -0.33
TRAPPC13-209ENST00000508304 TRAF7Q6Q0C0 670 aa12.99□□□□□ -0.33
TRAPPC13-209ENST00000508304 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms