RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 EIF4G3O43432 1585 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-209ENST00000508017 KTN1Q86UP2 1357 aaKnown RBP17.93■□□□□ 0.46
SNCAIP-209ENST00000508017 KDM5DQ9BY66 1539 aa17.93■□□□□ 0.46
SNCAIP-209ENST00000508017 RTL5Q5HYW3 569 aaPredicted RBP17.91■□□□□ 0.46
SNCAIP-209ENST00000508017 SHANK2Q9UPX8 1470 aa17.91■□□□□ 0.46
SNCAIP-209ENST00000508017 CDCA7LQ96GN5 454 aa17.9■□□□□ 0.46
SNCAIP-209ENST00000508017 PARD3Q8TEW0 1356 aa17.9■□□□□ 0.46
SNCAIP-209ENST00000508017 ABCC10Q5T3U5 1492 aa17.89■□□□□ 0.45
SNCAIP-209ENST00000508017 NLRP13Q86W25 1043 aa17.89■□□□□ 0.45
SNCAIP-209ENST00000508017 TCERG1O14776 1098 aaKnown RBP17.89■□□□□ 0.45
SNCAIP-209ENST00000508017 PDE4AP27815 886 aa17.89■□□□□ 0.45
SNCAIP-209ENST00000508017 PTPRGP23470 1445 aa17.88■□□□□ 0.45
SNCAIP-209ENST00000508017 TRPM1Q7Z4N2 1603 aa17.87■□□□□ 0.45
SNCAIP-209ENST00000508017 HNRNPMP52272 730 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNCAIP-209ENST00000508017 TSPY4P0CV99 314 aa17.86■□□□□ 0.45
SNCAIP-209ENST00000508017 TSPY10P0CW01 314 aa17.86■□□□□ 0.45
SNCAIP-209ENST00000508017 PLEKHD1A6NEE1 506 aa17.86■□□□□ 0.45
SNCAIP-209ENST00000508017 PLIN1O60240 522 aa17.86■□□□□ 0.45
SNCAIP-209ENST00000508017 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-209ENST00000508017 NBPF1Q3BBV0 1214 aa17.85■□□□□ 0.45
SNCAIP-209ENST00000508017 SKAP1Q86WV1 359 aa17.85■□□□□ 0.45
SNCAIP-209ENST00000508017 MAGI1Q96QZ7 1491 aaPredicted RBP17.85■□□□□ 0.45
SNCAIP-209ENST00000508017 FBLN2P98095 1184 aa17.84■□□□□ 0.45
SNCAIP-209ENST00000508017 BACH2Q9BYV9 841 aa17.84■□□□□ 0.45
SNCAIP-209ENST00000508017 PRAG1Q86YV5 1406 aa17.84■□□□□ 0.45
SNCAIP-209ENST00000508017 PER1O15534 1290 aaPredicted RBP17.84■□□□□ 0.45
SNCAIP-209ENST00000508017 PDE3BQ13370 1112 aa17.84■□□□□ 0.45
SNCAIP-209ENST00000508017 LAS1LQ9Y4W2 734 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-209ENST00000508017 ABCA8O94911 1581 aa17.84■□□□□ 0.45
SNCAIP-209ENST00000508017 ATP10BO94823 1461 aa17.83■□□□□ 0.44
SNCAIP-209ENST00000508017 CARMIL2Q6F5E8 1435 aa17.83■□□□□ 0.44
SNCAIP-209ENST00000508017 CC2D1BQ5T0F9 858 aaKnown RBP17.83■□□□□ 0.44
SNCAIP-209ENST00000508017 FAM135AQ9P2D6 1515 aa17.83■□□□□ 0.44
SNCAIP-209ENST00000508017 RGL3Q3MIN7 710 aa17.82■□□□□ 0.44
SNCAIP-209ENST00000508017 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
SNCAIP-209ENST00000508017 SYNJ2O15056 1496 aa17.81■□□□□ 0.44
SNCAIP-209ENST00000508017 DISP3Q9P2K9 1392 aa17.8■□□□□ 0.44
SNCAIP-209ENST00000508017 MS4A1P11836 297 aa17.8■□□□□ 0.44
SNCAIP-209ENST00000508017 CRBNQ96SW2 442 aa17.79■□□□□ 0.44
SNCAIP-209ENST00000508017 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
SNCAIP-209ENST00000508017 COL17A1Q9UMD9 1497 aaPredicted RBP17.79■□□□□ 0.44
SNCAIP-209ENST00000508017 CCDC144AA2RUR9 1427 aa17.79■□□□□ 0.44
SNCAIP-209ENST00000508017 BLMP54132 1417 aaPredicted RBP17.78■□□□□ 0.44
SNCAIP-209ENST00000508017 A2MP01023 1474 aa17.77■□□□□ 0.44
SNCAIP-209ENST00000508017 NEFMP07197 916 aa17.77■□□□□ 0.43
SNCAIP-209ENST00000508017 TESK2Q96S53 571 aa17.77■□□□□ 0.43
SNCAIP-209ENST00000508017 SAMD9LQ8IVG5 1584 aa17.77■□□□□ 0.43
SNCAIP-209ENST00000508017 PLA2R1Q13018 1463 aa17.76■□□□□ 0.43
SNCAIP-209ENST00000508017 PANK3Q9H999 370 aa17.76■□□□□ 0.43
SNCAIP-209ENST00000508017 GPRASP1Q5JY77 1395 aa17.75■□□□□ 0.43
SNCAIP-209ENST00000508017 NUP160Q12769 1436 aa17.75■□□□□ 0.43
SNCAIP-209ENST00000508017 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
SNCAIP-209ENST00000508017 CCDC141Q6ZP82 1450 aa17.75■□□□□ 0.43
SNCAIP-209ENST00000508017 PRDM15P57071 1507 aaPredicted RBP17.75■□□□□ 0.43
SNCAIP-209ENST00000508017 CDC42BPBQ9Y5S2 1711 aa17.74■□□□□ 0.43
SNCAIP-209ENST00000508017 C20orf194Q5TEA3 1177 aa17.74■□□□□ 0.43
SNCAIP-209ENST00000508017 ERBINQ96RT1 1412 aa17.73■□□□□ 0.43
SNCAIP-209ENST00000508017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNCAIP-209ENST00000508017 ZMYM4Q5VZL5 1548 aa17.72■□□□□ 0.43
SNCAIP-209ENST00000508017 IL27Q8NEV9 243 aa17.72■□□□□ 0.43
SNCAIP-209ENST00000508017 LAMC1P11047 1609 aa17.72■□□□□ 0.43
SNCAIP-209ENST00000508017 WASHC2CQ9Y4E1 1318 aa17.7■□□□□ 0.42
SNCAIP-209ENST00000508017 PREX2Q70Z35 1606 aa17.7■□□□□ 0.42
SNCAIP-209ENST00000508017 UNC13BO14795 1591 aa17.69■□□□□ 0.42
SNCAIP-209ENST00000508017 INSRP06213 1382 aa17.69■□□□□ 0.42
SNCAIP-209ENST00000508017 ADAMTS8Q9UP79 889 aa17.69■□□□□ 0.42
SNCAIP-209ENST00000508017 SYCP2Q9BX26 1530 aa17.68■□□□□ 0.42
SNCAIP-209ENST00000508017 PLEKHH2Q8IVE3 1493 aa17.67■□□□□ 0.42
SNCAIP-209ENST00000508017 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
SNCAIP-209ENST00000508017 TMF1P82094 1093 aa17.66■□□□□ 0.42
SNCAIP-209ENST00000508017 KDM2BQ8NHM5 1336 aa17.66■□□□□ 0.42
SNCAIP-209ENST00000508017 PPM1GO15355 546 aaPredicted RBP17.66■□□□□ 0.42
SNCAIP-209ENST00000508017 PLEKHH1Q9ULM0 1364 aa17.65■□□□□ 0.42
SNCAIP-209ENST00000508017 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-209ENST00000508017 SLC4A3P48751 1232 aa17.64■□□□□ 0.41
SNCAIP-209ENST00000508017 RTN4Q9NQC3 1192 aaKnown RBP17.64■□□□□ 0.41
SNCAIP-209ENST00000508017 IQGAP3Q86VI3 1631 aa17.64■□□□□ 0.41
SNCAIP-209ENST00000508017 MAGI2Q86UL8 1455 aa17.63■□□□□ 0.41
SNCAIP-209ENST00000508017 DDRGK1Q96HY6 314 aa17.63■□□□□ 0.41
SNCAIP-209ENST00000508017 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
SNCAIP-209ENST00000508017 RNF17Q9BXT8 1623 aaKnown RBP17.62■□□□□ 0.41
SNCAIP-209ENST00000508017 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
SNCAIP-209ENST00000508017 TTC37Q6PGP7 1564 aa17.61■□□□□ 0.41
SNCAIP-209ENST00000508017 WDR7Q9Y4E6 1490 aa17.61■□□□□ 0.41
SNCAIP-209ENST00000508017 PPP2R1AP30153 589 aa17.61■□□□□ 0.41
SNCAIP-209ENST00000508017 MAST1Q9Y2H9 1570 aa17.61■□□□□ 0.41
SNCAIP-209ENST00000508017 RSPH4AQ5TD94 716 aa17.6■□□□□ 0.41
SNCAIP-209ENST00000508017 ARHGAP5Q13017 1502 aa17.6■□□□□ 0.41
SNCAIP-209ENST00000508017 CENPQQ7L2Z9 268 aaPredicted RBP17.59■□□□□ 0.41
SNCAIP-209ENST00000508017 ANO8Q9HCE9 1232 aaPredicted RBP17.59■□□□□ 0.41
SNCAIP-209ENST00000508017 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.41
SNCAIP-209ENST00000508017 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
SNCAIP-209ENST00000508017 NFKBIBQ15653 356 aa17.57■□□□□ 0.4
SNCAIP-209ENST00000508017 C8orf34Q49A92 452 aa17.57■□□□□ 0.4
SNCAIP-209ENST00000508017 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
SNCAIP-209ENST00000508017 PLXNC1O60486 1568 aa17.57■□□□□ 0.4
SNCAIP-209ENST00000508017 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-209ENST00000508017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.55■□□□□ 0.4
SNCAIP-209ENST00000508017 GOLGA2Q08379 1002 aa17.55■□□□□ 0.4
SNCAIP-209ENST00000508017 ATP10AO60312 1499 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms