RNA–Protein interactions for RNA: ENST00000507478.1

GIN1-202, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 2

Gene GIN1, Length 462 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-202ENST00000507478 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
GIN1-202ENST00000507478 PHF14O94880 888 aa12.06□□□□□ -0.48
GIN1-202ENST00000507478 COL9A1P20849 921 aa12.04□□□□□ -0.48
GIN1-202ENST00000507478 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
GIN1-202ENST00000507478 KIAA1468Q9P260 1216 aa12.03□□□□□ -0.48
GIN1-202ENST00000507478 BCAMP50895 628 aa12□□□□□ -0.49
GIN1-202ENST00000507478 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
GIN1-202ENST00000507478 EPAS1Q99814 870 aa11.99□□□□□ -0.49
GIN1-202ENST00000507478 ONECUT3O60422 494 aaPredicted RBP11.98□□□□□ -0.49
GIN1-202ENST00000507478 C6orf132Q5T0Z8 1188 aa11.98□□□□□ -0.49
GIN1-202ENST00000507478 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
GIN1-202ENST00000507478 ZFRQ96KR1 1074 aaKnown RBP11.98□□□□□ -0.49
GIN1-202ENST00000507478 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
GIN1-202ENST00000507478 ITGBL1O95965 494 aaPredicted RBP11.96□□□□□ -0.49
GIN1-202ENST00000507478 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
GIN1-202ENST00000507478 SEPT9Q9UHD8 586 aaPredicted RBP11.94□□□□□ -0.5
GIN1-202ENST00000507478 DPYSL4O14531 572 aa11.93□□□□□ -0.5
GIN1-202ENST00000507478 KCNC4Q03721 635 aa11.93□□□□□ -0.5
GIN1-202ENST00000507478 WBP1LQ9NX94 342 aa11.92□□□□□ -0.5
GIN1-202ENST00000507478 TRIM6-TRIM34B2RNG4 842 aa11.91□□□□□ -0.5
GIN1-202ENST00000507478 CAMK2BQ13554 666 aa11.91□□□□□ -0.5
GIN1-202ENST00000507478 FAM98CQ17RN3 349 aaKnown RBP11.9□□□□□ -0.5
GIN1-202ENST00000507478 DDX12PQ92771 950 aa11.89□□□□□ -0.51
GIN1-202ENST00000507478 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
GIN1-202ENST00000507478 LRCH3Q96II8 777 aa11.88□□□□□ -0.51
GIN1-202ENST00000507478 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
GIN1-202ENST00000507478 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
GIN1-202ENST00000507478 Q6ZNB5 142 aa11.85□□□□□ -0.51
GIN1-202ENST00000507478 HPS5Q9UPZ3 1129 aa11.85□□□□□ -0.51
GIN1-202ENST00000507478 MAP3K7O43318 606 aa11.83□□□□□ -0.52
GIN1-202ENST00000507478 PPP4CP60510 307 aa11.82□□□□□ -0.52
GIN1-202ENST00000507478 NBR1Q14596 966 aa11.82□□□□□ -0.52
GIN1-202ENST00000507478 EN1Q05925 392 aaPredicted RBP11.78□□□□□ -0.52
GIN1-202ENST00000507478 TSR1Q2NL82 804 aaKnown RBP11.77□□□□□ -0.53
GIN1-202ENST00000507478 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
GIN1-202ENST00000507478 SPDYE16A6NNV3 312 aaPredicted RBP11.76□□□□□ -0.53
GIN1-202ENST00000507478 AMER1Q5JTC6 1135 aaPredicted RBP11.76□□□□□ -0.53
GIN1-202ENST00000507478 LAPTM4AQ15012 233 aa11.75□□□□□ -0.53
GIN1-202ENST00000507478 BBXQ8WY36 941 aaPredicted RBP11.75□□□□□ -0.53
GIN1-202ENST00000507478 HDGFP51858 240 aaKnown RBP11.73□□□□□ -0.53
GIN1-202ENST00000507478 PDIA6Q15084 440 aa11.73□□□□□ -0.53
GIN1-202ENST00000507478 CDCA7LQ96GN5 454 aa11.73□□□□□ -0.53
GIN1-202ENST00000507478 PRSS12P56730 875 aa11.72□□□□□ -0.53
GIN1-202ENST00000507478 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
GIN1-202ENST00000507478 SMAPO00193 183 aa11.71□□□□□ -0.53
GIN1-202ENST00000507478 SAMD7Q7Z3H4 446 aa11.71□□□□□ -0.53
GIN1-202ENST00000507478 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.53
GIN1-202ENST00000507478 GFRA3O60609 400 aa11.7□□□□□ -0.54
GIN1-202ENST00000507478 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
GIN1-202ENST00000507478 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
GIN1-202ENST00000507478 WDR70Q9NW82 654 aa11.68□□□□□ -0.54
GIN1-202ENST00000507478 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
GIN1-202ENST00000507478 E2F4Q16254 413 aa11.67□□□□□ -0.54
GIN1-202ENST00000507478 TJAP1Q5JTD0 557 aa11.67□□□□□ -0.54
GIN1-202ENST00000507478 TATDN2Q93075 761 aa11.67□□□□□ -0.54
GIN1-202ENST00000507478 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
GIN1-202ENST00000507478 PRKD2Q9BZL6 878 aa11.65□□□□□ -0.54
GIN1-202ENST00000507478 IL21Q9HBE4 155 aa11.65□□□□□ -0.54
GIN1-202ENST00000507478 RNF40O75150 1001 aa11.64□□□□□ -0.55
GIN1-202ENST00000507478 TRAF7Q6Q0C0 670 aa11.64□□□□□ -0.55
GIN1-202ENST00000507478 MTRQ99707 1265 aa11.64□□□□□ -0.55
GIN1-202ENST00000507478 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
GIN1-202ENST00000507478 FAM198AQ9UFP1 575 aa11.63□□□□□ -0.55
GIN1-202ENST00000507478 PPP1R18Q6NYC8 613 aa11.61□□□□□ -0.55
GIN1-202ENST00000507478 NUDT18Q6ZVK8 323 aa11.61□□□□□ -0.55
GIN1-202ENST00000507478 PRIM1P49642 420 aaKnown RBP11.58□□□□□ -0.56
GIN1-202ENST00000507478 NECTIN2Q92692 538 aa11.58□□□□□ -0.56
GIN1-202ENST00000507478 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
GIN1-202ENST00000507478 C3orf80F5H4A9 247 aa11.57□□□□□ -0.56
GIN1-202ENST00000507478 ARIH1Q9Y4X5 557 aaPredicted RBP11.57□□□□□ -0.56
GIN1-202ENST00000507478 V9GY48 417 aaPredicted RBP11.57□□□□□ -0.56
GIN1-202ENST00000507478 NRG2O14511 850 aaPredicted RBP11.56□□□□□ -0.56
GIN1-202ENST00000507478 SLC24A1O60721 1099 aa11.56□□□□□ -0.56
GIN1-202ENST00000507478 OSBPP22059 807 aa11.56□□□□□ -0.56
GIN1-202ENST00000507478 ZNF516Q92618 1163 aa11.56□□□□□ -0.56
GIN1-202ENST00000507478 SLC4A3P48751 1232 aa11.55□□□□□ -0.56
GIN1-202ENST00000507478 RBM27Q9P2N5 1060 aaKnown RBP11.55□□□□□ -0.56
GIN1-202ENST00000507478 GGCXP38435 758 aa11.54□□□□□ -0.56
GIN1-202ENST00000507478 APLP1P51693 650 aa11.54□□□□□ -0.56
GIN1-202ENST00000507478 CDHR5Q9HBB8 845 aa11.54□□□□□ -0.56
GIN1-202ENST00000507478 CFAP44Q96MT7 982 aa11.53□□□□□ -0.56
GIN1-202ENST00000507478 SLF2Q8IX21 1173 aa11.52□□□□□ -0.57
GIN1-202ENST00000507478 COPS2P61201 443 aa11.5□□□□□ -0.57
GIN1-202ENST00000507478 SWT1Q5T5J6 900 aaKnown RBP11.5□□□□□ -0.57
GIN1-202ENST00000507478 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
GIN1-202ENST00000507478 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
GIN1-202ENST00000507478 PDZRN3Q9UPQ7 1066 aa11.49□□□□□ -0.57
GIN1-202ENST00000507478 LCE2BO14633 110 aa11.48□□□□□ -0.57
GIN1-202ENST00000507478 PADI6Q6TGC4 694 aa11.47□□□□□ -0.57
GIN1-202ENST00000507478 TMUB1Q9BVT8 246 aa11.46□□□□□ -0.57
GIN1-202ENST00000507478 PRR14Q9BWN1 585 aa11.45□□□□□ -0.58
GIN1-202ENST00000507478 ZNF787Q6DD87 383 aa11.44□□□□□ -0.58
GIN1-202ENST00000507478 TTC13Q8NBP0 860 aa11.44□□□□□ -0.58
GIN1-202ENST00000507478 NPDC1Q9NQX5 325 aaPredicted RBP11.44□□□□□ -0.58
GIN1-202ENST00000507478 ZPR1O75312 459 aa11.42□□□□□ -0.58
GIN1-202ENST00000507478 PCDHB3Q9Y5E6 796 aa11.41□□□□□ -0.58
GIN1-202ENST00000507478 EYA1Q99502 592 aa11.4□□□□□ -0.58
GIN1-202ENST00000507478 SLC19A1P41440 591 aa11.36□□□□□ -0.59
GIN1-202ENST00000507478 DNAJB2P25686 324 aa11.33□□□□□ -0.6
GIN1-202ENST00000507478 BLOC1S3Q6QNY0 202 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms