RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 RXRBP28702 533 aa13.27□□□□□ -0.29
CLDND1-214ENST00000507411 APLP2Q06481 763 aa13.27□□□□□ -0.29
CLDND1-214ENST00000507411 MED14O60244 1454 aa13.27□□□□□ -0.29
CLDND1-214ENST00000507411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLDND1-214ENST00000507411 KIDINS220Q9ULH0 1771 aa13.25□□□□□ -0.29
CLDND1-214ENST00000507411 IQGAP1P46940 1657 aa13.25□□□□□ -0.29
CLDND1-214ENST00000507411 CDK13Q14004 1512 aaKnown RBP13.25□□□□□ -0.29
CLDND1-214ENST00000507411 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
CLDND1-214ENST00000507411 DEPDC5O75140 1603 aa13.24□□□□□ -0.29
CLDND1-214ENST00000507411 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
CLDND1-214ENST00000507411 CDK12Q9NYV4 1490 aaPredicted RBP13.24□□□□□ -0.29
CLDND1-214ENST00000507411 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
CLDND1-214ENST00000507411 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
CLDND1-214ENST00000507411 ABCC1P33527 1531 aa13.23□□□□□ -0.29
CLDND1-214ENST00000507411 JCADQ9P266 1359 aa13.23□□□□□ -0.29
CLDND1-214ENST00000507411 CAPN15O75808 1086 aa13.23□□□□□ -0.29
CLDND1-214ENST00000507411 ITSN2Q9NZM3 1697 aa13.23□□□□□ -0.29
CLDND1-214ENST00000507411 ROBO1Q9Y6N7 1651 aa13.22□□□□□ -0.29
CLDND1-214ENST00000507411 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
CLDND1-214ENST00000507411 PRXQ9BXM0 1461 aa13.22□□□□□ -0.29
CLDND1-214ENST00000507411 TNRQ92752 1358 aa13.21□□□□□ -0.29
CLDND1-214ENST00000507411 GGT6Q6P531 493 aa13.2□□□□□ -0.3
CLDND1-214ENST00000507411 FAM135AQ9P2D6 1515 aa13.18□□□□□ -0.3
CLDND1-214ENST00000507411 KIF14Q15058 1648 aa13.18□□□□□ -0.3
CLDND1-214ENST00000507411 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
CLDND1-214ENST00000507411 XIRP1Q702N8 1843 aaKnown RBP13.18□□□□□ -0.3
CLDND1-214ENST00000507411 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-214ENST00000507411 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-214ENST00000507411 RANGAP1P46060 587 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-214ENST00000507411 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-214ENST00000507411 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-214ENST00000507411 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
CLDND1-214ENST00000507411 LRP6O75581 1613 aa13.17□□□□□ -0.3
CLDND1-214ENST00000507411 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
CLDND1-214ENST00000507411 UGGT1Q9NYU2 1555 aa13.15□□□□□ -0.3
CLDND1-214ENST00000507411 SPATA31A6Q5VVP1 1343 aa13.15□□□□□ -0.3
CLDND1-214ENST00000507411 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
CLDND1-214ENST00000507411 FBXO31Q5XUX0 539 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-214ENST00000507411 CDK11AQ9UQ88 783 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-214ENST00000507411 CDC42BPBQ9Y5S2 1711 aa13.13□□□□□ -0.31
CLDND1-214ENST00000507411 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
CLDND1-214ENST00000507411 RGS12O14924 1447 aa13.13□□□□□ -0.31
CLDND1-214ENST00000507411 PLXNC1O60486 1568 aa13.12□□□□□ -0.31
CLDND1-214ENST00000507411 SAMD9LQ8IVG5 1584 aa13.12□□□□□ -0.31
CLDND1-214ENST00000507411 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
CLDND1-214ENST00000507411 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
CLDND1-214ENST00000507411 A2MP01023 1474 aa13.11□□□□□ -0.31
CLDND1-214ENST00000507411 NLRP1Q9C000 1473 aa13.11□□□□□ -0.31
CLDND1-214ENST00000507411 ZC3H13Q5T200 1668 aaKnown RBP13.11□□□□□ -0.31
CLDND1-214ENST00000507411 ATAD2Q6PL18 1390 aa13.1□□□□□ -0.31
CLDND1-214ENST00000507411 CLIP1P30622 1438 aa13.09□□□□□ -0.31
CLDND1-214ENST00000507411 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
CLDND1-214ENST00000507411 PZPP20742 1482 aa13.09□□□□□ -0.31
CLDND1-214ENST00000507411 ATP7AQ04656 1500 aa13.08□□□□□ -0.31
CLDND1-214ENST00000507411 TMEM94Q12767 1356 aa13.08□□□□□ -0.31
CLDND1-214ENST00000507411 TROQ12816 1431 aaPredicted RBP13.08□□□□□ -0.32
CLDND1-214ENST00000507411 FGD6Q6ZV73 1430 aa13.08□□□□□ -0.32
CLDND1-214ENST00000507411 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
CLDND1-214ENST00000507411 PREX2Q70Z35 1606 aa13.08□□□□□ -0.32
CLDND1-214ENST00000507411 MIA2Q96PC5 1412 aa13.07□□□□□ -0.32
CLDND1-214ENST00000507411 COL16A1Q07092 1604 aaPredicted RBP13.07□□□□□ -0.32
CLDND1-214ENST00000507411 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
CLDND1-214ENST00000507411 AFF2P51816 1311 aa13.07□□□□□ -0.32
CLDND1-214ENST00000507411 LRP5O75197 1615 aa13.06□□□□□ -0.32
CLDND1-214ENST00000507411 DSG3P32926 999 aa13.06□□□□□ -0.32
CLDND1-214ENST00000507411 RBM6P78332 1123 aaKnown RBP13.06□□□□□ -0.32
CLDND1-214ENST00000507411 YY1P25490 414 aa13.03□□□□□ -0.32
CLDND1-214ENST00000507411 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
CLDND1-214ENST00000507411 SCAF11Q99590 1463 aaKnown RBP13.03□□□□□ -0.32
CLDND1-214ENST00000507411 QTRT2Q9H974 415 aaKnown RBP13.02□□□□□ -0.33
CLDND1-214ENST00000507411 MAP3K1Q13233 1512 aa13.02□□□□□ -0.33
CLDND1-214ENST00000507411 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
CLDND1-214ENST00000507411 SHPRHQ149N8 1683 aa13.02□□□□□ -0.33
CLDND1-214ENST00000507411 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
CLDND1-214ENST00000507411 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
CLDND1-214ENST00000507411 SYCP2Q9BX26 1530 aa13.01□□□□□ -0.33
CLDND1-214ENST00000507411 EP400Q96L91 3159 aa13□□□□□ -0.33
CLDND1-214ENST00000507411 MSH6P52701 1360 aa13□□□□□ -0.33
CLDND1-214ENST00000507411 CCDC125Q86Z20 511 aa13□□□□□ -0.33
CLDND1-214ENST00000507411 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLDND1-214ENST00000507411 NGLY1Q96IV0 654 aa12.99□□□□□ -0.33
CLDND1-214ENST00000507411 ADGBQ8N7X0 1667 aa12.99□□□□□ -0.33
CLDND1-214ENST00000507411 WASHC2CQ9Y4E1 1318 aa12.97□□□□□ -0.33
CLDND1-214ENST00000507411 TXNDC2Q86VQ3 553 aa12.97□□□□□ -0.33
CLDND1-214ENST00000507411 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
CLDND1-214ENST00000507411 KCNA6P17658 529 aa12.95□□□□□ -0.34
CLDND1-214ENST00000507411 LTKP29376 864 aa12.95□□□□□ -0.34
CLDND1-214ENST00000507411 CDC42BPAQ5VT25 1732 aa12.95□□□□□ -0.34
CLDND1-214ENST00000507411 PRDM15P57071 1507 aaPredicted RBP12.94□□□□□ -0.34
CLDND1-214ENST00000507411 C8orf37Q96NL8 207 aa12.94□□□□□ -0.34
CLDND1-214ENST00000507411 KIF3BO15066 747 aa12.93□□□□□ -0.34
CLDND1-214ENST00000507411 EID1Q9Y6B2 187 aa12.93□□□□□ -0.34
CLDND1-214ENST00000507411 NWD1Q149M9 1564 aa12.93□□□□□ -0.34
CLDND1-214ENST00000507411 ABCC3O15438 1527 aa12.93□□□□□ -0.34
CLDND1-214ENST00000507411 AHDC1Q5TGY3 1603 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-214ENST00000507411 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
CLDND1-214ENST00000507411 FMN1Q68DA7 1419 aa12.92□□□□□ -0.34
CLDND1-214ENST00000507411 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
CLDND1-214ENST00000507411 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
CLDND1-214ENST00000507411 NKTRP30414 1462 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms