RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 NBPF3Q9H094 633 aa7.31□□□□□ -1.24
SRPK1-208ENST00000507292 SPRYD3Q8NCJ5 442 aa7.29□□□□□ -1.24
SRPK1-208ENST00000507292 RBM33Q96EV2 1170 aaKnown RBP7.29□□□□□ -1.24
SRPK1-208ENST00000507292 DDX12PQ92771 950 aa7.28□□□□□ -1.24
SRPK1-208ENST00000507292 RABGEF1Q9UJ41 708 aa7.28□□□□□ -1.24
SRPK1-208ENST00000507292 C6orf132Q5T0Z8 1188 aa7.27□□□□□ -1.25
SRPK1-208ENST00000507292 EPAS1Q99814 870 aa7.27□□□□□ -1.25
SRPK1-208ENST00000507292 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.27□□□□□ -1.25
SRPK1-208ENST00000507292 RTN4Q9NQC3 1192 aaKnown RBP7.26□□□□□ -1.25
SRPK1-208ENST00000507292 KIAA1468Q9P260 1216 aa7.26□□□□□ -1.25
SRPK1-208ENST00000507292 AMER1Q5JTC6 1135 aaPredicted RBP7.25□□□□□ -1.25
SRPK1-208ENST00000507292 ANKK1Q8NFD2 765 aa7.25□□□□□ -1.25
SRPK1-208ENST00000507292 CFAP44Q96MT7 982 aa7.25□□□□□ -1.25
SRPK1-208ENST00000507292 BCAMP50895 628 aa7.24□□□□□ -1.25
SRPK1-208ENST00000507292 PAXIP1Q6ZW49 1069 aaPredicted RBP7.24□□□□□ -1.25
SRPK1-208ENST00000507292 SEPT9Q9UHD8 586 aaPredicted RBP7.24□□□□□ -1.25
SRPK1-208ENST00000507292 NBR1Q14596 966 aa7.23□□□□□ -1.25
SRPK1-208ENST00000507292 PDIA6Q15084 440 aa7.22□□□□□ -1.25
SRPK1-208ENST00000507292 ZFRQ96KR1 1074 aaKnown RBP7.22□□□□□ -1.25
SRPK1-208ENST00000507292 TRIM6-TRIM34B2RNG4 842 aa7.21□□□□□ -1.26
SRPK1-208ENST00000507292 TSR1Q2NL82 804 aaKnown RBP7.21□□□□□ -1.26
SRPK1-208ENST00000507292 LAPTM4BQ86VI4 370 aa7.21□□□□□ -1.26
SRPK1-208ENST00000507292 IRX2Q9BZI1 471 aaPredicted RBP7.21□□□□□ -1.26
SRPK1-208ENST00000507292 SOWAHBA6NEL2 793 aa7.2□□□□□ -1.26
SRPK1-208ENST00000507292 MAP3K7O43318 606 aa7.2□□□□□ -1.26
SRPK1-208ENST00000507292 EN1Q05925 392 aaPredicted RBP7.2□□□□□ -1.26
SRPK1-208ENST00000507292 E2F4Q16254 413 aa7.2□□□□□ -1.26
SRPK1-208ENST00000507292 WDR70Q9NW82 654 aa7.2□□□□□ -1.26
SRPK1-208ENST00000507292 SPDYE16A6NNV3 312 aaPredicted RBP7.19□□□□□ -1.26
SRPK1-208ENST00000507292 ONECUT3O60422 494 aaPredicted RBP7.19□□□□□ -1.26
SRPK1-208ENST00000507292 IFFO2Q5TF58 517 aa7.19□□□□□ -1.26
SRPK1-208ENST00000507292 GRXCR2A6NFK2 248 aa7.18□□□□□ -1.26
SRPK1-208ENST00000507292 WBP1LQ9NX94 342 aa7.18□□□□□ -1.26
SRPK1-208ENST00000507292 TSKSQ9UJT2 592 aa7.18□□□□□ -1.26
SRPK1-208ENST00000507292 A0A0G2JS52 829 aa7.17□□□□□ -1.26
SRPK1-208ENST00000507292 PRIM1P49642 420 aaKnown RBP7.17□□□□□ -1.26
SRPK1-208ENST00000507292 FAM98CQ17RN3 349 aaKnown RBP7.17□□□□□ -1.26
SRPK1-208ENST00000507292 PACS2Q86VP3 889 aa7.15□□□□□ -1.26
SRPK1-208ENST00000507292 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.15□□□□□ -1.26
SRPK1-208ENST00000507292 SMAPO00193 183 aa7.14□□□□□ -1.27
SRPK1-208ENST00000507292 RGS20O76081 388 aa7.14□□□□□ -1.27
SRPK1-208ENST00000507292 ITGBL1O95965 494 aaPredicted RBP7.14□□□□□ -1.27
SRPK1-208ENST00000507292 CDCA7LQ96GN5 454 aa7.14□□□□□ -1.27
SRPK1-208ENST00000507292 LRCH3Q96II8 777 aa7.14□□□□□ -1.27
SRPK1-208ENST00000507292 HPS5Q9UPZ3 1129 aa7.14□□□□□ -1.27
SRPK1-208ENST00000507292 PRSS12P56730 875 aa7.13□□□□□ -1.27
SRPK1-208ENST00000507292 FAM198AQ9UFP1 575 aa7.13□□□□□ -1.27
SRPK1-208ENST00000507292 TSR3Q9UJK0 312 aaKnown RBP7.13□□□□□ -1.27
SRPK1-208ENST00000507292 ARIH1Q9Y4X5 557 aaPredicted RBP7.13□□□□□ -1.27
SRPK1-208ENST00000507292 NYAP1Q6ZVC0 841 aa7.12□□□□□ -1.27
SRPK1-208ENST00000507292 CDHR5Q9HBB8 845 aa7.12□□□□□ -1.27
SRPK1-208ENST00000507292 C3orf80F5H4A9 247 aa7.11□□□□□ -1.27
SRPK1-208ENST00000507292 OSBPP22059 807 aa7.11□□□□□ -1.27
SRPK1-208ENST00000507292 KCNC4Q03721 635 aa7.1□□□□□ -1.27
SRPK1-208ENST00000507292 SAMD7Q7Z3H4 446 aa7.1□□□□□ -1.27
SRPK1-208ENST00000507292 PPP4CP60510 307 aa7.09□□□□□ -1.27
SRPK1-208ENST00000507292 CERKQ8TCT0 537 aa7.09□□□□□ -1.27
SRPK1-208ENST00000507292 TATDN2Q93075 761 aa7.09□□□□□ -1.27
SRPK1-208ENST00000507292 PNMA3Q9UL41 463 aa7.09□□□□□ -1.27
SRPK1-208ENST00000507292 TSHZ2Q9NRE2 1034 aa7.08□□□□□ -1.28
SRPK1-208ENST00000507292 NBPF26B4DH59 902 aa7.07□□□□□ -1.28
SRPK1-208ENST00000507292 NUDT18Q6ZVK8 323 aa7.06□□□□□ -1.28
SRPK1-208ENST00000507292 RNF40O75150 1001 aa7.05□□□□□ -1.28
SRPK1-208ENST00000507292 PADI6Q6TGC4 694 aa7.04□□□□□ -1.28
SRPK1-208ENST00000507292 NPDC1Q9NQX5 325 aaPredicted RBP7.04□□□□□ -1.28
SRPK1-208ENST00000507292 MLLT3P42568 568 aaPredicted RBP7.03□□□□□ -1.28
SRPK1-208ENST00000507292 HDGFP51858 240 aaKnown RBP7.03□□□□□ -1.28
SRPK1-208ENST00000507292 TJAP1Q5JTD0 557 aa7.02□□□□□ -1.29
SRPK1-208ENST00000507292 RBM27Q9P2N5 1060 aaKnown RBP7.02□□□□□ -1.29
SRPK1-208ENST00000507292 KCNV2Q8TDN2 545 aa7.01□□□□□ -1.29
SRPK1-208ENST00000507292 MTRQ99707 1265 aa7.01□□□□□ -1.29
SRPK1-208ENST00000507292 APLP1P51693 650 aa7□□□□□ -1.29
SRPK1-208ENST00000507292 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
SRPK1-208ENST00000507292 TTC13Q8NBP0 860 aa7□□□□□ -1.29
SRPK1-208ENST00000507292 ARHGEF1Q92888 912 aaKnown RBP7□□□□□ -1.29
SRPK1-208ENST00000507292 ZNF516Q92618 1163 aa6.99□□□□□ -1.29
SRPK1-208ENST00000507292 IL21Q9HBE4 155 aa6.99□□□□□ -1.29
SRPK1-208ENST00000507292 Q6ZNB5 142 aa6.97□□□□□ -1.29
SRPK1-208ENST00000507292 PPP1R18Q6NYC8 613 aa6.96□□□□□ -1.3
SRPK1-208ENST00000507292 SLF2Q8IX21 1173 aa6.96□□□□□ -1.3
SRPK1-208ENST00000507292 EYA1Q99502 592 aa6.96□□□□□ -1.3
SRPK1-208ENST00000507292 COPS2P61201 443 aa6.95□□□□□ -1.3
SRPK1-208ENST00000507292 NKX2-3Q8TAU0 364 aa6.95□□□□□ -1.3
SRPK1-208ENST00000507292 NUTM2FA1L443 756 aa6.94□□□□□ -1.3
SRPK1-208ENST00000507292 PTGDRQ13258 359 aa6.94□□□□□ -1.3
SRPK1-208ENST00000507292 PRKD2Q9BZL6 878 aa6.94□□□□□ -1.3
SRPK1-208ENST00000507292 FAM161AQ3B820 660 aa6.93□□□□□ -1.3
SRPK1-208ENST00000507292 NECTIN2Q92692 538 aa6.93□□□□□ -1.3
SRPK1-208ENST00000507292 SLC4A3P48751 1232 aa6.92□□□□□ -1.3
SRPK1-208ENST00000507292 SEMA3EO15041 775 aa6.91□□□□□ -1.3
SRPK1-208ENST00000507292 GFRA3O60609 400 aa6.91□□□□□ -1.3
SRPK1-208ENST00000507292 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.91□□□□□ -1.3
SRPK1-208ENST00000507292 ADGRG1Q9Y653 693 aa6.91□□□□□ -1.3
SRPK1-208ENST00000507292 DNAJB2P25686 324 aa6.9□□□□□ -1.3
SRPK1-208ENST00000507292 RBM46Q8TBY0 533 aaKnown RBP6.9□□□□□ -1.3
SRPK1-208ENST00000507292 ZPR1O75312 459 aa6.89□□□□□ -1.31
SRPK1-208ENST00000507292 P3H3Q8IVL6 736 aa6.89□□□□□ -1.31
SRPK1-208ENST00000507292 PCDHB3Q9Y5E6 796 aa6.89□□□□□ -1.31
SRPK1-208ENST00000507292 RCCD1A6NED2 376 aa6.88□□□□□ -1.31
SRPK1-208ENST00000507292 BLOC1S3Q6QNY0 202 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms