RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 DDX12PQ92771 950 aa15.64■□□□□ 0.09
PFDN1-202ENST00000507185 STAC3Q96MF2 364 aa15.64■□□□□ 0.09
PFDN1-202ENST00000507185 EPAS1Q99814 870 aa15.64■□□□□ 0.09
PFDN1-202ENST00000507185 VPS9D1Q9Y2B5 631 aa15.63■□□□□ 0.09
PFDN1-202ENST00000507185 ARIH1Q9Y4X5 557 aaPredicted RBP15.62■□□□□ 0.09
PFDN1-202ENST00000507185 HRO43593 1189 aa15.61■□□□□ 0.09
PFDN1-202ENST00000507185 PLCB2Q00722 1185 aa15.61■□□□□ 0.09
PFDN1-202ENST00000507185 SLC4A5Q9BY07 1137 aa15.6■□□□□ 0.09
PFDN1-202ENST00000507185 ZBED2Q9BTP6 218 aa15.58■□□□□ 0.08
PFDN1-202ENST00000507185 PPP1R3GB7ZBB8 358 aa15.55■□□□□ 0.08
PFDN1-202ENST00000507185 RBM33Q96EV2 1170 aaKnown RBP15.55■□□□□ 0.08
PFDN1-202ENST00000507185 NBR1Q14596 966 aa15.54■□□□□ 0.08
PFDN1-202ENST00000507185 C6orf132Q5T0Z8 1188 aa15.53■□□□□ 0.08
PFDN1-202ENST00000507185 COL9A1P20849 921 aa15.52■□□□□ 0.08
PFDN1-202ENST00000507185 GRXCR2A6NFK2 248 aa15.5■□□□□ 0.07
PFDN1-202ENST00000507185 MAP3K7O43318 606 aa15.48■□□□□ 0.07
PFDN1-202ENST00000507185 BHMG1C9JSJ3 638 aaPredicted RBP15.47■□□□□ 0.07
PFDN1-202ENST00000507185 EN1Q05925 392 aaPredicted RBP15.47■□□□□ 0.07
PFDN1-202ENST00000507185 PROX2Q3B8N5 592 aa15.46■□□□□ 0.07
PFDN1-202ENST00000507185 ARHGEF1Q92888 912 aaKnown RBP15.46■□□□□ 0.07
PFDN1-202ENST00000507185 KCTD12Q96CX2 325 aaKnown RBP15.46■□□□□ 0.07
PFDN1-202ENST00000507185 NBPF3Q9H094 633 aa15.46■□□□□ 0.07
PFDN1-202ENST00000507185 MRPL50Q8N5N7 158 aaKnown RBP15.45■□□□□ 0.06
PFDN1-202ENST00000507185 KCNV2Q8TDN2 545 aa15.45■□□□□ 0.06
PFDN1-202ENST00000507185 HCSTQ9UBK5 93 aa15.44■□□□□ 0.06
PFDN1-202ENST00000507185 GOLGA8CPA6NN73 597 aa15.43■□□□□ 0.06
PFDN1-202ENST00000507185 RABGEF1Q9UJ41 708 aa15.43■□□□□ 0.06
PFDN1-202ENST00000507185 TSR1Q2NL82 804 aaKnown RBP15.42■□□□□ 0.06
PFDN1-202ENST00000507185 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
PFDN1-202ENST00000507185 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
PFDN1-202ENST00000507185 P3H3Q8IVL6 736 aa15.4■□□□□ 0.06
PFDN1-202ENST00000507185 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
PFDN1-202ENST00000507185 KIAA1468Q9P260 1216 aa15.38■□□□□ 0.05
PFDN1-202ENST00000507185 ONECUT3O60422 494 aaPredicted RBP15.37■□□□□ 0.05
PFDN1-202ENST00000507185 OSBPP22059 807 aa15.37■□□□□ 0.05
PFDN1-202ENST00000507185 PRIM1P49642 420 aaKnown RBP15.36■□□□□ 0.05
PFDN1-202ENST00000507185 TRIM6-TRIM34B2RNG4 842 aa15.35■□□□□ 0.05
PFDN1-202ENST00000507185 WNT2BQ93097 391 aa15.35■□□□□ 0.05
PFDN1-202ENST00000507185 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.04
PFDN1-202ENST00000507185 CERKQ8TCT0 537 aa15.32■□□□□ 0.04
PFDN1-202ENST00000507185 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
PFDN1-202ENST00000507185 PTPN5P54829 565 aa15.31■□□□□ 0.04
PFDN1-202ENST00000507185 LAPTM4BQ86VI4 370 aa15.31■□□□□ 0.04
PFDN1-202ENST00000507185 THSD4Q6ZMP0 1018 aa15.29■□□□□ 0.04
PFDN1-202ENST00000507185 PACS2Q86VP3 889 aa15.29■□□□□ 0.04
PFDN1-202ENST00000507185 MLLT3P42568 568 aaPredicted RBP15.28■□□□□ 0.04
PFDN1-202ENST00000507185 PRSS12P56730 875 aa15.27■□□□□ 0.04
PFDN1-202ENST00000507185 ANKK1Q8NFD2 765 aa15.27■□□□□ 0.04
PFDN1-202ENST00000507185 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
PFDN1-202ENST00000507185 SEPT9Q9UHD8 586 aaPredicted RBP15.27■□□□□ 0.04
PFDN1-202ENST00000507185 TSKSQ9UJT2 592 aa15.27■□□□□ 0.04
PFDN1-202ENST00000507185 CDHR5Q9HBB8 845 aa15.26■□□□□ 0.03
PFDN1-202ENST00000507185 ZFRQ96KR1 1074 aaKnown RBP15.23■□□□□ 0.03
PFDN1-202ENST00000507185 CC2D2AQ9P2K1 1620 aa15.23■□□□□ 0.03
PFDN1-202ENST00000507185 FAM98CQ17RN3 349 aaKnown RBP15.22■□□□□ 0.03
PFDN1-202ENST00000507185 SEMA3EO15041 775 aa15.2■□□□□ 0.02
PFDN1-202ENST00000507185 PLA2G2EQ9NZK7 142 aa15.2■□□□□ 0.02
PFDN1-202ENST00000507185 SCRIBQ14160 1630 aa15.19■□□□□ 0.02
PFDN1-202ENST00000507185 KDM2AQ9Y2K7 1162 aa15.18■□□□□ 0.02
PFDN1-202ENST00000507185 SOWAHBA6NEL2 793 aa15.17■□□□□ 0.02
PFDN1-202ENST00000507185 BCAMP50895 628 aa15.17■□□□□ 0.02
PFDN1-202ENST00000507185 RBM27Q9P2N5 1060 aaKnown RBP15.17■□□□□ 0.02
PFDN1-202ENST00000507185 FAM198AQ9UFP1 575 aa15.17■□□□□ 0.02
PFDN1-202ENST00000507185 NPDC1Q9NQX5 325 aaPredicted RBP15.16■□□□□ 0.02
PFDN1-202ENST00000507185 SHROOM4Q9ULL8 1493 aa15.15■□□□□ 0.02
PFDN1-202ENST00000507185 NBPF26B4DH59 902 aa15.15■□□□□ 0.02
PFDN1-202ENST00000507185 SMAPO00193 183 aa15.14■□□□□ 0.01
PFDN1-202ENST00000507185 TATDN2Q93075 761 aa15.14■□□□□ 0.01
PFDN1-202ENST00000507185 PNMA3Q9UL41 463 aa15.14■□□□□ 0.01
PFDN1-202ENST00000507185 ZCCHC6Q5VYS8 1495 aaKnown RBP15.14■□□□□ 0.01
PFDN1-202ENST00000507185 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
PFDN1-202ENST00000507185 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
PFDN1-202ENST00000507185 LRCH3Q96II8 777 aa15.12■□□□□ 0.01
PFDN1-202ENST00000507185 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.12■□□□□ 0.01
PFDN1-202ENST00000507185 PADI6Q6TGC4 694 aa15.11■□□□□ 0.01
PFDN1-202ENST00000507185 NUTM2FA1L443 756 aa15.1■□□□□ 0.01
PFDN1-202ENST00000507185 NUDT18Q6ZVK8 323 aa15.1■□□□□ 0.01
PFDN1-202ENST00000507185 C3orf80F5H4A9 247 aa15.09■□□□□ 0.01
PFDN1-202ENST00000507185 TESPA1A2RU30 521 aaPredicted RBP15.07■□□□□ 0
PFDN1-202ENST00000507185 SMYD5Q6GMV2 418 aa15.07■□□□□ 0
PFDN1-202ENST00000507185 TTC13Q8NBP0 860 aa15.07■□□□□ 0
PFDN1-202ENST00000507185 PTGDRQ13258 359 aa15.06■□□□□ 0
PFDN1-202ENST00000507185 WBP1LQ9NX94 342 aa15.06■□□□□ 0
PFDN1-202ENST00000507185 TSR3Q9UJK0 312 aaKnown RBP15.05■□□□□ -0
PFDN1-202ENST00000507185 HPS5Q9UPZ3 1129 aa15.05■□□□□ -0
PFDN1-202ENST00000507185 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
PFDN1-202ENST00000507185 NYAP1Q6ZVC0 841 aa15.04■□□□□ -0
PFDN1-202ENST00000507185 SAMD7Q7Z3H4 446 aa15.04■□□□□ -0
PFDN1-202ENST00000507185 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
PFDN1-202ENST00000507185 FCHSD2O94868 740 aa15□□□□□ -0.01
PFDN1-202ENST00000507185 PPP4CP60510 307 aa15□□□□□ -0.01
PFDN1-202ENST00000507185 RBM26Q5T8P6 1007 aaKnown RBP14.98□□□□□ -0.01
PFDN1-202ENST00000507185 RNF40O75150 1001 aa14.95□□□□□ -0.02
PFDN1-202ENST00000507185 EYA1Q99502 592 aa14.95□□□□□ -0.02
PFDN1-202ENST00000507185 IFFO2Q5TF58 517 aa14.94□□□□□ -0.02
PFDN1-202ENST00000507185 RBM46Q8TBY0 533 aaKnown RBP14.92□□□□□ -0.02
PFDN1-202ENST00000507185 SWT1Q5T5J6 900 aaKnown RBP14.91□□□□□ -0.02
PFDN1-202ENST00000507185 ADGRG1Q9Y653 693 aa14.91□□□□□ -0.02
PFDN1-202ENST00000507185 HIC1Q14526 733 aa14.9□□□□□ -0.02
PFDN1-202ENST00000507185 ITGBL1O95965 494 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms