RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 OTUD6BQ8N6M0 293 aa7.83□□□□□ -1.16
PDE4D-216ENST00000507116 TERF2IPQ9NYB0 399 aa7.83□□□□□ -1.16
PDE4D-216ENST00000507116 OFD1O75665 1012 aa7.82□□□□□ -1.16
PDE4D-216ENST00000507116 KCNJ4P48050 445 aa7.82□□□□□ -1.16
PDE4D-216ENST00000507116 FAM9BQ8IZU0 186 aa7.82□□□□□ -1.16
PDE4D-216ENST00000507116 FRAT2O75474 233 aaPredicted RBP7.82□□□□□ -1.16
PDE4D-216ENST00000507116 FAM50AQ14320 339 aaKnown RBP7.82□□□□□ -1.16
PDE4D-216ENST00000507116 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.82□□□□□ -1.16
PDE4D-216ENST00000507116 CEP83Q9Y592 693 aa7.82□□□□□ -1.16
PDE4D-216ENST00000507116 LOC102724159A0A0B4J2E5 919 aa7.81□□□□□ -1.16
PDE4D-216ENST00000507116 PWP2Q15269 919 aaKnown RBP7.81□□□□□ -1.16
PDE4D-216ENST00000507116 XRCC6P12956 609 aaKnown RBP eCLIP7.81□□□□□ -1.16
PDE4D-216ENST00000507116 NBPF10Q6P3W6 841 aaKnown RBP7.81□□□□□ -1.16
PDE4D-216ENST00000507116 MYCBPQ99417 103 aaPredicted RBP7.81□□□□□ -1.16
PDE4D-216ENST00000507116 SCRIBQ14160 1630 aa7.81□□□□□ -1.16
PDE4D-216ENST00000507116 NBPF6Q5VWK0 638 aa7.8□□□□□ -1.16
PDE4D-216ENST00000507116 NBPF5PQ86XG9 351 aaPredicted RBP7.8□□□□□ -1.16
PDE4D-216ENST00000507116 NBPF4Q96M43 638 aa7.8□□□□□ -1.16
PDE4D-216ENST00000507116 CCDC66A2RUB6 948 aa7.8□□□□□ -1.16
PDE4D-216ENST00000507116 ZCCHC6Q5VYS8 1495 aaKnown RBP7.8□□□□□ -1.16
PDE4D-216ENST00000507116 EP400NLQ6ZTU2 488 aa7.8□□□□□ -1.16
PDE4D-216ENST00000507116 TMTC2Q8N394 836 aa7.8□□□□□ -1.16
PDE4D-216ENST00000507116 RBM28Q9NW13 759 aaKnown RBP7.8□□□□□ -1.16
PDE4D-216ENST00000507116 TRIM6-TRIM34B2RNG4 842 aa7.79□□□□□ -1.16
PDE4D-216ENST00000507116 TRIM34Q9BYJ4 488 aa7.79□□□□□ -1.16
PDE4D-216ENST00000507116 ARID4AP29374 1257 aaPredicted RBP7.79□□□□□ -1.16
PDE4D-216ENST00000507116 HSP90AB4PQ58FF6 505 aa7.79□□□□□ -1.16
PDE4D-216ENST00000507116 RNF217Q8TC41 542 aa7.79□□□□□ -1.16
PDE4D-216ENST00000507116 BSDC1Q9NW68 430 aaPredicted RBP7.79□□□□□ -1.16
PDE4D-216ENST00000507116 NCAPD3P42695 1498 aa7.79□□□□□ -1.16
PDE4D-216ENST00000507116 MYH16Q9H6N6 1097 aa7.78□□□□□ -1.16
PDE4D-216ENST00000507116 FSD2A1L4K1 749 aa7.78□□□□□ -1.16
PDE4D-216ENST00000507116 CCDC172P0C7W6 258 aa7.78□□□□□ -1.16
PDE4D-216ENST00000507116 TIGD1Q96MW7 591 aa7.78□□□□□ -1.16
PDE4D-216ENST00000507116 POGKQ9P215 609 aa7.78□□□□□ -1.16
PDE4D-216ENST00000507116 ERBB4Q15303 1308 aa7.78□□□□□ -1.16
PDE4D-216ENST00000507116 ZBED9Q6R2W3 1325 aa7.78□□□□□ -1.16
PDE4D-216ENST00000507116 MRE11P49959 708 aa7.77□□□□□ -1.17
PDE4D-216ENST00000507116 ZKSCAN8Q15776 578 aaPredicted RBP7.77□□□□□ -1.17
PDE4D-216ENST00000507116 ZBTB9Q96C00 473 aa7.77□□□□□ -1.17
PDE4D-216ENST00000507116 UQCRHLA0A096LP55 91 aa7.77□□□□□ -1.17
PDE4D-216ENST00000507116 UQCRHP07919 91 aa7.77□□□□□ -1.17
PDE4D-216ENST00000507116 RGL3Q3MIN7 710 aa7.77□□□□□ -1.17
PDE4D-216ENST00000507116 KIF3AQ9Y496 699 aa7.77□□□□□ -1.17
PDE4D-216ENST00000507116 ZBTB7CA1YPR0 619 aa7.76□□□□□ -1.17
PDE4D-216ENST00000507116 BRPF1P55201 1214 aaPredicted RBP7.76□□□□□ -1.17
PDE4D-216ENST00000507116 CT47A1Q5JQC4 288 aaPredicted RBP7.76□□□□□ -1.17
PDE4D-216ENST00000507116 NCAPGQ9BPX3 1015 aa7.76□□□□□ -1.17
PDE4D-216ENST00000507116 SMC4Q9NTJ3 1288 aa7.76□□□□□ -1.17
PDE4D-216ENST00000507116 MS4A1P11836 297 aa7.76□□□□□ -1.17
PDE4D-216ENST00000507116 STK26Q9P289 416 aa7.76□□□□□ -1.17
PDE4D-216ENST00000507116 KDM2AQ9Y2K7 1162 aa7.76□□□□□ -1.17
PDE4D-216ENST00000507116 TULP2O00295 520 aa7.76□□□□□ -1.17
PDE4D-216ENST00000507116 PDE4AP27815 886 aa7.76□□□□□ -1.17
PDE4D-216ENST00000507116 ZNF771Q7L3S4 317 aaPredicted RBP7.76□□□□□ -1.17
PDE4D-216ENST00000507116 BACH2Q9BYV9 841 aa7.75□□□□□ -1.17
PDE4D-216ENST00000507116 ISY1Q9ULR0 285 aaKnown RBP7.75□□□□□ -1.17
PDE4D-216ENST00000507116 ZBTB12Q9Y330 459 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-216ENST00000507116 MRVI1Q9Y6F6 885 aa7.75□□□□□ -1.17
PDE4D-216ENST00000507116 CCDC96Q2M329 555 aa7.74□□□□□ -1.17
PDE4D-216ENST00000507116 RINLQ6ZS11 566 aa7.74□□□□□ -1.17
PDE4D-216ENST00000507116 TSHZ1Q6ZSZ6 1077 aa7.74□□□□□ -1.17
PDE4D-216ENST00000507116 FAM177A1Q8N128 213 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-216ENST00000507116 ZNF513Q8N8E2 541 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-216ENST00000507116 CTR9Q6PD62 1173 aa7.74□□□□□ -1.17
PDE4D-216ENST00000507116 SIRT1Q96EB6 747 aa7.74□□□□□ -1.17
PDE4D-216ENST00000507116 TNNT3P45378 269 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-216ENST00000507116 PANK2Q9BZ23 570 aa7.74□□□□□ -1.17
PDE4D-216ENST00000507116 CBX1P83916 185 aa7.73□□□□□ -1.17
PDE4D-216ENST00000507116 R3HCC1Q9Y3T6 440 aaKnown RBP7.73□□□□□ -1.17
PDE4D-216ENST00000507116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.73□□□□□ -1.17
PDE4D-216ENST00000507116 ANP32CO43423 234 aa7.73□□□□□ -1.17
PDE4D-216ENST00000507116 KDM4AO75164 1064 aa7.73□□□□□ -1.17
PDE4D-216ENST00000507116 CALRP27797 417 aaKnown RBP7.73□□□□□ -1.17
PDE4D-216ENST00000507116 GTF2A1P52655 376 aaPredicted RBP7.73□□□□□ -1.17
PDE4D-216ENST00000507116 MFAP1P55081 439 aaKnown RBP7.73□□□□□ -1.17
PDE4D-216ENST00000507116 SGSM3Q96HU1 749 aa7.72□□□□□ -1.17
PDE4D-216ENST00000507116 CALCOCO1Q9P1Z2 691 aa7.72□□□□□ -1.17
PDE4D-216ENST00000507116 KIF16BQ96L93 1317 aa7.72□□□□□ -1.17
PDE4D-216ENST00000507116 KIF1CO43896 1103 aaKnown RBP7.72□□□□□ -1.17
PDE4D-216ENST00000507116 HNRNPUQ00839 825 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDE4D-216ENST00000507116 PHLDB1Q86UU1 1377 aa7.72□□□□□ -1.17
PDE4D-216ENST00000507116 NRDCO43847 1150 aa7.71□□□□□ -1.17
PDE4D-216ENST00000507116 ZSCAN30Q86W11 494 aa7.71□□□□□ -1.17
PDE4D-216ENST00000507116 MSNP26038 577 aaKnown RBP7.71□□□□□ -1.18
PDE4D-216ENST00000507116 ARMCX6Q7L4S7 300 aa7.71□□□□□ -1.18
PDE4D-216ENST00000507116 NECTIN2Q92692 538 aa7.71□□□□□ -1.18
PDE4D-216ENST00000507116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.71□□□□□ -1.18
PDE4D-216ENST00000507116 ZNF853P0CG23 659 aa7.71□□□□□ -1.18
PDE4D-216ENST00000507116 CAPN2P17655 700 aa7.71□□□□□ -1.18
PDE4D-216ENST00000507116 EXOC8Q8IYI6 725 aa7.71□□□□□ -1.18
PDE4D-216ENST00000507116 DONSONQ9NYP3 566 aa7.71□□□□□ -1.18
PDE4D-216ENST00000507116 MTA1Q13330 715 aa7.7□□□□□ -1.18
PDE4D-216ENST00000507116 MLECQ14165 292 aa7.7□□□□□ -1.18
PDE4D-216ENST00000507116 BRMS1Q9HCU9 246 aa7.7□□□□□ -1.18
PDE4D-216ENST00000507116 NINLQ9Y2I6 1382 aa7.7□□□□□ -1.18
PDE4D-216ENST00000507116 TDO2P48775 406 aa7.7□□□□□ -1.18
PDE4D-216ENST00000507116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.7□□□□□ -1.182e-6■■□□□ 12.3
PDE4D-216ENST00000507116 ITFG2Q969R8 447 aa7.7□□□□□ -1.18
PDE4D-216ENST00000507116 MNS1Q8NEH6 495 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms