RNA–Protein interactions for RNA: ENST00000506928.5

POLK-208, Transcript of DNA polymerase kappa, human

TSL 5

Gene POLK, Length 3,820 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLK-208	ENST00000506928	RBM27	Q9P2N5	1060 aa	Known RBP	6.32	□□□□□ -1.4
POLK-208	ENST00000506928	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	6.32	□□□□□ -1.4
POLK-208	ENST00000506928	PCGF6	Q9BYE7	350 aa		6.31	□□□□□ -1.4
POLK-208	ENST00000506928	STAC3	Q96MF2	364 aa		6.31	□□□□□ -1.4
POLK-208	ENST00000506928	SETD1A	O15047	1707 aa	Known RBP	6.3	□□□□□ -1.4
POLK-208	ENST00000506928	SIRT1	Q96EB6	747 aa		6.3	□□□□□ -1.4
POLK-208	ENST00000506928	CARNS1	A5YM72	827 aa		6.3	□□□□□ -1.4
POLK-208	ENST00000506928	ZC3H15	Q8WU90	426 aa	Known RBP	6.3	□□□□□ -1.4
POLK-208	ENST00000506928	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.3	□□□□□ -1.4
POLK-208	ENST00000506928	HECW1	Q76N89	1606 aa		6.3	□□□□□ -1.4
POLK-208	ENST00000506928	TRAIP	Q9BWF2	469 aa		6.29	□□□□□ -1.4
POLK-208	ENST00000506928	RTL5	Q5HYW3	569 aa	Predicted RBP	6.29	□□□□□ -1.4
POLK-208	ENST00000506928	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.29	□□□□□ -1.4
POLK-208	ENST00000506928	RRBP1	Q9P2E9	1410 aa	Known RBP	6.29	□□□□□ -1.4
POLK-208	ENST00000506928	MPND	Q8N594	471 aa		6.29	□□□□□ -1.4
POLK-208	ENST00000506928	ZNF777	Q9ULD5	760 aa	Predicted RBP	6.29	□□□□□ -1.4
POLK-208	ENST00000506928	PPME1	Q9Y570	386 aa		6.29	□□□□□ -1.4
POLK-208	ENST00000506928	TOP2B	Q02880	1626 aa		6.28	□□□□□ -1.4
POLK-208	ENST00000506928	MBD5	Q9P267	1494 aa		6.28	□□□□□ -1.4
POLK-208	ENST00000506928	NEFM	P07197	916 aa		6.28	□□□□□ -1.4
POLK-208	ENST00000506928	FOXD4	Q12950	439 aa	Predicted RBP	6.28	□□□□□ -1.4
POLK-208	ENST00000506928	KDM5A	P29375	1690 aa	Known RBP	6.27	□□□□□ -1.41
POLK-208	ENST00000506928	PREX2	Q70Z35	1606 aa		6.27	□□□□□ -1.41
POLK-208	ENST00000506928	CNGB1	Q14028	1251 aa	Predicted RBP	6.27	□□□□□ -1.41
POLK-208	ENST00000506928	HS6ST3	Q8IZP7	471 aa		6.27	□□□□□ -1.41
POLK-208	ENST00000506928	KDM6B	O15054	1643 aa		6.27	□□□□□ -1.41
POLK-208	ENST00000506928	ZNF608	Q9ULD9	1512 aa	Predicted RBP	6.27	□□□□□ -1.41
POLK-208	ENST00000506928	DDX60	Q8IY21	1712 aa	Known RBP	6.26	□□□□□ -1.41
POLK-208	ENST00000506928	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.26	□□□□□ -1.41
POLK-208	ENST00000506928	TPD52L2	O43399	206 aa	Known RBP	6.26	□□□□□ -1.41
POLK-208	ENST00000506928	MYCN	P04198	464 aa	Predicted RBP	6.26	□□□□□ -1.41
POLK-208	ENST00000506928	MICAL1	Q8TDZ2	1067 aa		6.26	□□□□□ -1.41
POLK-208	ENST00000506928	MAP3K1	Q13233	1512 aa		6.25	□□□□□ -1.41
POLK-208	ENST00000506928	RBM26	Q5T8P6	1007 aa	Known RBP	6.25	□□□□□ -1.41
POLK-208	ENST00000506928	VTI1A	Q96AJ9	217 aa		6.25	□□□□□ -1.41
POLK-208	ENST00000506928	RIOK3	O14730	519 aa	Known RBP	6.25	□□□□□ -1.41
POLK-208	ENST00000506928	SUGT1	Q9Y2Z0	365 aa		6.25	□□□□□ -1.41
POLK-208	ENST00000506928	GOLGA3	Q08378	1498 aa		6.25	□□□□□ -1.41
POLK-208	ENST00000506928	RTEL1-TNFRSF6B	F6WH68	1400 aa		6.25	□□□□□ -1.41
POLK-208	ENST00000506928	ABCA6	Q8N139	1617 aa		6.25	□□□□□ -1.41
POLK-208	ENST00000506928	MYH16	Q9H6N6	1097 aa		6.24	□□□□□ -1.41
POLK-208	ENST00000506928	ARAP1	Q96P48	1450 aa		6.24	□□□□□ -1.41
POLK-208	ENST00000506928	RAB11FIP3	O75154	756 aa		6.24	□□□□□ -1.41
POLK-208	ENST00000506928	FAM117A	Q9C073	453 aa		6.24	□□□□□ -1.41
POLK-208	ENST00000506928	CROCC2	H7BZ55	1655 aa		6.24	□□□□□ -1.41
POLK-208	ENST00000506928	ANKRD62	A6NC57	917 aa		6.23	□□□□□ -1.41
POLK-208	ENST00000506928	MAP4K4	O95819	1239 aa	Predicted RBP	6.23	□□□□□ -1.41
POLK-208	ENST00000506928	TERF2IP	Q9NYB0	399 aa		6.23	□□□□□ -1.41
POLK-208	ENST00000506928	KCNV2	Q8TDN2	545 aa		6.23	□□□□□ -1.41
POLK-208	ENST00000506928	SHPRH	Q149N8	1683 aa		6.23	□□□□□ -1.41
POLK-208	ENST00000506928	SPATA32	Q96LK8	384 aa		6.23	□□□□□ -1.41
POLK-208	ENST00000506928	ZNF830	Q96NB3	372 aa	Predicted RBP	6.23	□□□□□ -1.41
POLK-208	ENST00000506928	NME8	Q8N427	588 aa		6.22	□□□□□ -1.41
POLK-208	ENST00000506928	POLD1	P28340	1107 aa		6.22	□□□□□ -1.41
POLK-208	ENST00000506928	CECR2	Q9BXF3	1484 aa		6.22	□□□□□ -1.41
POLK-208	ENST00000506928	ARHGEF12	Q9NZN5	1544 aa		6.22	□□□□□ -1.41
POLK-208	ENST00000506928	CFAP65	Q6ZU64	1925 aa	Known RBP	6.22	□□□□□ -1.41
POLK-208	ENST00000506928	TESPA1	A2RU30	521 aa	Predicted RBP	6.22	□□□□□ -1.41
POLK-208	ENST00000506928	ARMCX6	Q7L4S7	300 aa		6.22	□□□□□ -1.41
POLK-208	ENST00000506928	HDAC5	Q9UQL6	1122 aa		6.22	□□□□□ -1.41
POLK-208	ENST00000506928	KIF21A	Q7Z4S6	1674 aa		6.21	□□□□□ -1.41
POLK-208	ENST00000506928	NKX1-1	Q15270	411 aa	Predicted RBP	6.21	□□□□□ -1.41
POLK-208	ENST00000506928	GIMAP6	Q6P9H5	292 aa		6.21	□□□□□ -1.41
POLK-208	ENST00000506928	KLHL42	Q9P2K6	505 aa		6.21	□□□□□ -1.41
POLK-208	ENST00000506928	MROH2B	Q7Z745	1585 aa		6.21	□□□□□ -1.42
POLK-208	ENST00000506928	PNMA2	Q9UL42	364 aa		6.21	□□□□□ -1.42
POLK-208	ENST00000506928	PAX3	P23760	479 aa		6.21	□□□□□ -1.42
POLK-208	ENST00000506928	SH3BP1	Q9Y3L3	701 aa		6.21	□□□□□ -1.42
POLK-208	ENST00000506928	RPS6KL1	Q9Y6S9	549 aa		6.21	□□□□□ -1.42
POLK-208	ENST00000506928	PHF14	O94880	888 aa		6.2	□□□□□ -1.42
POLK-208	ENST00000506928	APP	P05067	770 aa		6.2	□□□□□ -1.42
POLK-208	ENST00000506928	RGL3	Q3MIN7	710 aa		6.2	□□□□□ -1.42
POLK-208	ENST00000506928	DHX57	Q6P158	1386 aa	Known RBP	6.2	□□□□□ -1.42
POLK-208	ENST00000506928	CLGN	O14967	610 aa		6.2	□□□□□ -1.42
POLK-208	ENST00000506928	ANKRD13A	Q8IZ07	590 aa		6.2	□□□□□ -1.42
POLK-208	ENST00000506928	KIF1A	Q12756	1690 aa		6.2	□□□□□ -1.42
POLK-208	ENST00000506928	CCER2	I3L3R5	266 aa		6.19	□□□□□ -1.42
POLK-208	ENST00000506928	PDE6B	P35913	854 aa		6.19	□□□□□ -1.42
POLK-208	ENST00000506928	GORAB	Q5T7V8	394 aa		6.19	□□□□□ -1.42
POLK-208	ENST00000506928	RINL	Q6ZS11	566 aa		6.19	□□□□□ -1.42
POLK-208	ENST00000506928	TET3	O43151	1660 aa		6.19	□□□□□ -1.42
POLK-208	ENST00000506928	RNF17	Q9BXT8	1623 aa	Known RBP	6.19	□□□□□ -1.42
POLK-208	ENST00000506928	CEP170	Q5SW79	1584 aa		6.19	□□□□□ -1.42
POLK-208	ENST00000506928	KIF4A	O95239	1232 aa		6.19	□□□□□ -1.42
POLK-208	ENST00000506928	CCDC184	Q52MB2	194 aa		6.19	□□□□□ -1.42
POLK-208	ENST00000506928	ZNF622	Q969S3	477 aa	Known RBP eCLIP	6.18	□□□□□ -1.42	1e-6	■□□□□ 10.7
POLK-208	ENST00000506928	SPATA31E1	Q6ZUB1	1445 aa		6.18	□□□□□ -1.42
POLK-208	ENST00000506928	RUSC2	Q8N2Y8	1516 aa		6.18	□□□□□ -1.42
POLK-208	ENST00000506928	TRAK2	O60296	914 aa		6.18	□□□□□ -1.42
POLK-208	ENST00000506928	RALBP1	Q15311	655 aa		6.18	□□□□□ -1.42
POLK-208	ENST00000506928	KIAA1522	Q9P206	1035 aa	Predicted RBP	6.18	□□□□□ -1.42
POLK-208	ENST00000506928	IGF1R	P08069	1367 aa		6.18	□□□□□ -1.42
POLK-208	ENST00000506928	PPFIA4	O75335	1185 aa		6.17	□□□□□ -1.42
POLK-208	ENST00000506928	PBRM1	Q86U86	1689 aa		6.17	□□□□□ -1.42
POLK-208	ENST00000506928	PREX1	Q8TCU6	1659 aa		6.17	□□□□□ -1.42
POLK-208	ENST00000506928	VGLL3	A8MV65	326 aa		6.17	□□□□□ -1.42
POLK-208	ENST00000506928	BARGIN	Q6ZT62	677 aa		6.17	□□□□□ -1.42
POLK-208	ENST00000506928	IGSF5	Q9NSI5	407 aa		6.17	□□□□□ -1.42
POLK-208	ENST00000506928	CRYBG1	Q9Y4K1	1723 aa		6.16	□□□□□ -1.42
POLK-208	ENST00000506928	KDM5C	P41229	1560 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms