RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 EEA1Q15075 1411 aa8.9□□□□□ -0.98
CLDND1-213ENST00000506927 PHF14O94880 888 aa8.9□□□□□ -0.98
CLDND1-213ENST00000506927 PPARGC1BQ86YN6 1023 aaKnown RBP8.9□□□□□ -0.98
CLDND1-213ENST00000506927 ZDHHC16Q969W1 377 aa8.9□□□□□ -0.98
CLDND1-213ENST00000506927 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
CLDND1-213ENST00000506927 PBX2P40425 430 aa8.88□□□□□ -0.99
CLDND1-213ENST00000506927 ADAM33Q9BZ11 813 aa8.88□□□□□ -0.99
CLDND1-213ENST00000506927 ARHGAP33O14559 1287 aa8.87□□□□□ -0.99
CLDND1-213ENST00000506927 MYT1Q01538 1121 aa8.87□□□□□ -0.99
CLDND1-213ENST00000506927 TYW1BQ6NUM6 668 aa8.87□□□□□ -0.99
CLDND1-213ENST00000506927 EPAS1Q99814 870 aa8.87□□□□□ -0.99
CLDND1-213ENST00000506927 BCL2L12Q9HB09 334 aa8.87□□□□□ -0.99
CLDND1-213ENST00000506927 PSEN2P49810 448 aa8.86□□□□□ -0.99
CLDND1-213ENST00000506927 NBR1Q14596 966 aa8.86□□□□□ -0.99
CLDND1-213ENST00000506927 SPNS2Q8IVW8 549 aa8.86□□□□□ -0.99
CLDND1-213ENST00000506927 FBXW7Q969H0 707 aa8.86□□□□□ -0.99
CLDND1-213ENST00000506927 SEMA3EO15041 775 aa8.85□□□□□ -0.99
CLDND1-213ENST00000506927 SLC24A1O60721 1099 aa8.85□□□□□ -0.99
CLDND1-213ENST00000506927 MLLT3P42568 568 aaPredicted RBP8.85□□□□□ -0.99
CLDND1-213ENST00000506927 KCNK17Q96T54 332 aa8.85□□□□□ -0.99
CLDND1-213ENST00000506927 LSM11P83369 360 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLDND1-213ENST00000506927 MROH2BQ7Z745 1585 aa8.84□□□□□ -0.99
CLDND1-213ENST00000506927 RBM33Q96EV2 1170 aaKnown RBP8.84□□□□□ -0.99
CLDND1-213ENST00000506927 CENPBP07199 599 aaPredicted RBP8.83□□□□□ -1
CLDND1-213ENST00000506927 OSBPP22059 807 aa8.83□□□□□ -1
CLDND1-213ENST00000506927 PTPREP23469 700 aa8.83□□□□□ -1
CLDND1-213ENST00000506927 WRNQ14191 1432 aaPredicted RBP eCLIP8.82□□□□□ -1
CLDND1-213ENST00000506927 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
CLDND1-213ENST00000506927 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
CLDND1-213ENST00000506927 DMRTA1Q5VZB9 504 aa8.82□□□□□ -1
CLDND1-213ENST00000506927 ANKRD13DQ6ZTN6 518 aa8.82□□□□□ -1
CLDND1-213ENST00000506927 TOP2AP11388 1531 aaKnown RBP8.81□□□□□ -1
CLDND1-213ENST00000506927 C6orf132Q5T0Z8 1188 aa8.81□□□□□ -1
CLDND1-213ENST00000506927 FAM9AQ8IZU1 332 aaPredicted RBP8.81□□□□□ -1
CLDND1-213ENST00000506927 KCNH8Q96L42 1107 aa8.81□□□□□ -1
CLDND1-213ENST00000506927 MAP3K7O43318 606 aa8.8□□□□□ -1
CLDND1-213ENST00000506927 MMRN1Q13201 1228 aa8.8□□□□□ -1
CLDND1-213ENST00000506927 CCER1Q8TC90 406 aaPredicted RBP8.8□□□□□ -1
CLDND1-213ENST00000506927 WIZO95785 1651 aa8.79□□□□□ -1
CLDND1-213ENST00000506927 CECR2Q9BXF3 1484 aa8.79□□□□□ -1
CLDND1-213ENST00000506927 TESPA1A2RU30 521 aaPredicted RBP8.79□□□□□ -1
CLDND1-213ENST00000506927 COL9A1P20849 921 aa8.79□□□□□ -1
CLDND1-213ENST00000506927 TSR1Q2NL82 804 aaKnown RBP8.79□□□□□ -1
CLDND1-213ENST00000506927 TNIKQ9UKE5 1360 aa8.77□□□□□ -1.01
CLDND1-213ENST00000506927 PPP1R3GB7ZBB8 358 aa8.76□□□□□ -1.01
CLDND1-213ENST00000506927 ADGRD1Q6QNK2 874 aa8.76□□□□□ -1.01
CLDND1-213ENST00000506927 ZBED2Q9BTP6 218 aa8.76□□□□□ -1.01
CLDND1-213ENST00000506927 TK2O00142 265 aa8.75□□□□□ -1.01
CLDND1-213ENST00000506927 SMARCA4P51532 1647 aa8.74□□□□□ -1.01
CLDND1-213ENST00000506927 SLC4A5Q9BY07 1137 aa8.74□□□□□ -1.01
CLDND1-213ENST00000506927 CDHR5Q9HBB8 845 aa8.74□□□□□ -1.01
CLDND1-213ENST00000506927 VPS9D1Q9Y2B5 631 aa8.74□□□□□ -1.01
CLDND1-213ENST00000506927 EIF4G1Q04637 1599 aaKnown RBP8.73□□□□□ -1.01
CLDND1-213ENST00000506927 PROX2Q3B8N5 592 aa8.73□□□□□ -1.01
CLDND1-213ENST00000506927 SMYD5Q6GMV2 418 aa8.73□□□□□ -1.01
CLDND1-213ENST00000506927 HRO43593 1189 aa8.71□□□□□ -1.02
CLDND1-213ENST00000506927 NPDC1Q9NQX5 325 aaPredicted RBP8.71□□□□□ -1.02
CLDND1-213ENST00000506927 RBM26Q5T8P6 1007 aaKnown RBP8.7□□□□□ -1.02
CLDND1-213ENST00000506927 GOLGA3Q08378 1498 aa8.7□□□□□ -1.02
CLDND1-213ENST00000506927 NUTM2FA1L443 756 aa8.69□□□□□ -1.02
CLDND1-213ENST00000506927 DIEXFQ68CQ4 756 aaKnown RBP8.69□□□□□ -1.02
CLDND1-213ENST00000506927 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
CLDND1-213ENST00000506927 CEP162Q5TB80 1403 aa8.69□□□□□ -1.02
CLDND1-213ENST00000506927 CCDC88BA6NC98 1476 aa8.69□□□□□ -1.02
CLDND1-213ENST00000506927 SMARCA2P51531 1590 aa8.69□□□□□ -1.02
CLDND1-213ENST00000506927 CDCA7LQ96GN5 454 aa8.68□□□□□ -1.02
CLDND1-213ENST00000506927 MYT1LQ9UL68 1186 aa8.68□□□□□ -1.02
CLDND1-213ENST00000506927 ACIN1Q9UKV3 1341 aaKnown RBP8.68□□□□□ -1.02
CLDND1-213ENST00000506927 TRIM6-TRIM34B2RNG4 842 aa8.67□□□□□ -1.02
CLDND1-213ENST00000506927 BHMG1C9JSJ3 638 aaPredicted RBP8.67□□□□□ -1.02
CLDND1-213ENST00000506927 PRSS12P56730 875 aa8.67□□□□□ -1.02
CLDND1-213ENST00000506927 RNF166Q96A37 237 aaPredicted RBP8.67□□□□□ -1.02
CLDND1-213ENST00000506927 KIAA1468Q9P260 1216 aa8.67□□□□□ -1.02
CLDND1-213ENST00000506927 RABGEF1Q9UJ41 708 aa8.67□□□□□ -1.02
CLDND1-213ENST00000506927 TSKSQ9UJT2 592 aa8.67□□□□□ -1.02
CLDND1-213ENST00000506927 CEP164Q9UPV0 1460 aa8.66□□□□□ -1.02
CLDND1-213ENST00000506927 CLSPNQ9HAW4 1339 aa8.66□□□□□ -1.02
CLDND1-213ENST00000506927 ONECUT3O60422 494 aaPredicted RBP8.66□□□□□ -1.02
CLDND1-213ENST00000506927 UBTFP17480 764 aaKnown RBP8.66□□□□□ -1.02
CLDND1-213ENST00000506927 PTGDRQ13258 359 aa8.66□□□□□ -1.02
CLDND1-213ENST00000506927 STAC3Q96MF2 364 aa8.66□□□□□ -1.02
CLDND1-213ENST00000506927 PEG3Q9GZU2 1588 aa8.65□□□□□ -1.02
CLDND1-213ENST00000506927 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.02
CLDND1-213ENST00000506927 BAZ1BQ9UIG0 1483 aaKnown RBP8.64□□□□□ -1.03
CLDND1-213ENST00000506927 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
CLDND1-213ENST00000506927 KIF21BO75037 1637 aa8.63□□□□□ -1.03
CLDND1-213ENST00000506927 PACS2Q86VP3 889 aa8.63□□□□□ -1.03
CLDND1-213ENST00000506927 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
CLDND1-213ENST00000506927 NBPF3Q9H094 633 aa8.63□□□□□ -1.03
CLDND1-213ENST00000506927 FCHSD2O94868 740 aa8.62□□□□□ -1.03
CLDND1-213ENST00000506927 PADI6Q6TGC4 694 aa8.62□□□□□ -1.03
CLDND1-213ENST00000506927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
CLDND1-213ENST00000506927 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
CLDND1-213ENST00000506927 C3orf80F5H4A9 247 aa8.61□□□□□ -1.03
CLDND1-213ENST00000506927 TTC13Q8NBP0 860 aa8.61□□□□□ -1.03
CLDND1-213ENST00000506927 SEPT9Q9UHD8 586 aaPredicted RBP8.61□□□□□ -1.03
CLDND1-213ENST00000506927 GPR37O15354 613 aa8.6□□□□□ -1.03
CLDND1-213ENST00000506927 GPIHBP1Q8IV16 184 aa8.6□□□□□ -1.03
CLDND1-213ENST00000506927 SMAPO00193 183 aa8.59□□□□□ -1.03
CLDND1-213ENST00000506927 HIC1Q14526 733 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms