RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
LIN54-206ENST00000506560 INO80Q9ULG1 1556 aaPredicted RBP17.18■□□□□ 0.34
LIN54-206ENST00000506560 RTEL1-TNFRSF6BF6WH68 1400 aa17.18■□□□□ 0.34
LIN54-206ENST00000506560 SPATA31E1Q6ZUB1 1445 aa17.17■□□□□ 0.34
LIN54-206ENST00000506560 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
LIN54-206ENST00000506560 KIF3BO15066 747 aa17.15■□□□□ 0.34
LIN54-206ENST00000506560 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
LIN54-206ENST00000506560 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
LIN54-206ENST00000506560 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
LIN54-206ENST00000506560 KIDINS220Q9ULH0 1771 aa17.14■□□□□ 0.33
LIN54-206ENST00000506560 RAPGEF3O95398 923 aa17.12■□□□□ 0.33
LIN54-206ENST00000506560 USP47Q96K76 1375 aa17.11■□□□□ 0.33
LIN54-206ENST00000506560 UHRF1BP1Q6BDS2 1440 aa17.11■□□□□ 0.33
LIN54-206ENST00000506560 E9PCH4 1651 aa17.11■□□□□ 0.33
LIN54-206ENST00000506560 CCDC7Q96M83 1385 aa17.11■□□□□ 0.33
LIN54-206ENST00000506560 GTF3C3Q9Y5Q9 886 aa17.11■□□□□ 0.33
LIN54-206ENST00000506560 KIF7Q2M1P5 1343 aa17.1■□□□□ 0.33
LIN54-206ENST00000506560 ANP32CO43423 234 aa17.1■□□□□ 0.33
LIN54-206ENST00000506560 DHX29Q7Z478 1369 aaKnown RBP17.09■□□□□ 0.33
LIN54-206ENST00000506560 A2MP01023 1474 aa17.09■□□□□ 0.33
LIN54-206ENST00000506560 ZNF518AQ6AHZ1 1483 aa17.09■□□□□ 0.33
LIN54-206ENST00000506560 BCORL1Q5H9F3 1711 aa17.09■□□□□ 0.33
LIN54-206ENST00000506560 POGZQ7Z3K3 1410 aa17.08■□□□□ 0.32
LIN54-206ENST00000506560 CARD11Q9BXL7 1154 aa17.08■□□□□ 0.32
LIN54-206ENST00000506560 DEPDC5O75140 1603 aa17.08■□□□□ 0.32
LIN54-206ENST00000506560 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
LIN54-206ENST00000506560 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
LIN54-206ENST00000506560 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
LIN54-206ENST00000506560 KDM5CP41229 1560 aa17.07■□□□□ 0.32
LIN54-206ENST00000506560 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
LIN54-206ENST00000506560 ATP10AO60312 1499 aa17.06■□□□□ 0.32
LIN54-206ENST00000506560 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
LIN54-206ENST00000506560 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
LIN54-206ENST00000506560 FRMPD1Q5SYB0 1578 aa17.03■□□□□ 0.32
LIN54-206ENST00000506560 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
LIN54-206ENST00000506560 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
LIN54-206ENST00000506560 CNTLNQ9NXG0 1405 aa17.03■□□□□ 0.32
LIN54-206ENST00000506560 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.32
LIN54-206ENST00000506560 UGGT1Q9NYU2 1555 aa17.02■□□□□ 0.31
LIN54-206ENST00000506560 PRDM15P57071 1507 aaPredicted RBP17.01■□□□□ 0.31
LIN54-206ENST00000506560 FAM69CQ0P6D2 419 aa17.01■□□□□ 0.31
LIN54-206ENST00000506560 GGT6Q6P531 493 aa17.01■□□□□ 0.31
LIN54-206ENST00000506560 CFAP74Q9C0B2 1584 aa17.01■□□□□ 0.31
LIN54-206ENST00000506560 ABCA6Q8N139 1617 aa17■□□□□ 0.31
LIN54-206ENST00000506560 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
LIN54-206ENST00000506560 TET3O43151 1660 aa17■□□□□ 0.31
LIN54-206ENST00000506560 CLTCL1P53675 1640 aa17■□□□□ 0.31
LIN54-206ENST00000506560 HECW2Q9P2P5 1572 aa17■□□□□ 0.31
LIN54-206ENST00000506560 SPHKAPQ2M3C7 1700 aa17■□□□□ 0.31
LIN54-206ENST00000506560 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
LIN54-206ENST00000506560 KANK1Q14678 1352 aa16.99■□□□□ 0.31
LIN54-206ENST00000506560 TRPM1Q7Z4N2 1603 aa16.99■□□□□ 0.31
LIN54-206ENST00000506560 MAP3K4Q9Y6R4 1608 aa16.99■□□□□ 0.31
LIN54-206ENST00000506560 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
LIN54-206ENST00000506560 MLH3Q9UHC1 1453 aa16.99■□□□□ 0.31
LIN54-206ENST00000506560 EIF2AK4Q9P2K8 1649 aaKnown RBP16.99■□□□□ 0.31
LIN54-206ENST00000506560 PTPRTO14522 1441 aa16.99■□□□□ 0.31
LIN54-206ENST00000506560 CEP152O94986 1710 aa16.98■□□□□ 0.31
LIN54-206ENST00000506560 TRPM2O94759 1503 aa16.98■□□□□ 0.31
LIN54-206ENST00000506560 NEO1Q92859 1461 aa16.98■□□□□ 0.31
LIN54-206ENST00000506560 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
LIN54-206ENST00000506560 POLR1AO95602 1720 aaPredicted RBP16.98■□□□□ 0.31
LIN54-206ENST00000506560 TSPOAP1O95153 1857 aa16.97■□□□□ 0.31
LIN54-206ENST00000506560 PPRC1Q5VV67 1664 aaKnown RBP16.97■□□□□ 0.31
LIN54-206ENST00000506560 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.31
LIN54-206ENST00000506560 RICTORQ6R327 1708 aa16.94■□□□□ 0.3
LIN54-206ENST00000506560 DIP2BQ9P265 1576 aa16.94■□□□□ 0.3
LIN54-206ENST00000506560 EFCAB6Q5THR3 1501 aa16.93■□□□□ 0.3
LIN54-206ENST00000506560 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
LIN54-206ENST00000506560 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
LIN54-206ENST00000506560 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
LIN54-206ENST00000506560 GLI2P10070 1586 aa16.91■□□□□ 0.3
LIN54-206ENST00000506560 GPRASP1Q5JY77 1395 aa16.9■□□□□ 0.3
LIN54-206ENST00000506560 NPATQ14207 1427 aa16.9■□□□□ 0.3
LIN54-206ENST00000506560 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
LIN54-206ENST00000506560 MADDQ8WXG6 1647 aa16.89■□□□□ 0.29
LIN54-206ENST00000506560 MROH2AA6NES4 1674 aa16.87■□□□□ 0.29
LIN54-206ENST00000506560 LMTK2Q8IWU2 1503 aa16.87■□□□□ 0.29
LIN54-206ENST00000506560 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
LIN54-206ENST00000506560 TESK2Q96S53 571 aa16.87■□□□□ 0.29
LIN54-206ENST00000506560 ABCC3O15438 1527 aa16.86■□□□□ 0.29
LIN54-206ENST00000506560 DISP3Q9P2K9 1392 aa16.85■□□□□ 0.29
LIN54-206ENST00000506560 ADGRF5Q8IZF2 1346 aa16.85■□□□□ 0.29
LIN54-206ENST00000506560 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
LIN54-206ENST00000506560 CFAP70Q5T0N1 1121 aa16.83■□□□□ 0.28
LIN54-206ENST00000506560 KIF1BO60333 1816 aa16.82■□□□□ 0.28
LIN54-206ENST00000506560 COL17A1Q9UMD9 1497 aaPredicted RBP16.81■□□□□ 0.28
LIN54-206ENST00000506560 ARID4BQ4LE39 1312 aaPredicted RBP16.81■□□□□ 0.28
LIN54-206ENST00000506560 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
LIN54-206ENST00000506560 LAMC1P11047 1609 aa16.8■□□□□ 0.28
LIN54-206ENST00000506560 NUTM2DQ5VT03 806 aaPredicted RBP16.8■□□□□ 0.28
LIN54-206ENST00000506560 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
LIN54-206ENST00000506560 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
LIN54-206ENST00000506560 CAMSAP1Q5T5Y3 1602 aa16.8■□□□□ 0.28
LIN54-206ENST00000506560 KIF13AQ9H1H9 1805 aa16.79■□□□□ 0.28
LIN54-206ENST00000506560 HNRNPUQ00839 825 aaKnown RBP eCLIP16.78■□□□□ 0.28
LIN54-206ENST00000506560 NOS1P29475 1434 aa16.78■□□□□ 0.28
LIN54-206ENST00000506560 ADGRB3O60242 1522 aa16.76■□□□□ 0.27
LIN54-206ENST00000506560 IQGAP1P46940 1657 aa16.76■□□□□ 0.27
LIN54-206ENST00000506560 SYNMO15061 1565 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms