RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 NRG2O14511 850 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC13-208ENST00000505553 LCE2BO14633 110 aa8.65□□□□□ -1.02
TRAPPC13-208ENST00000505553 PDE4AP27815 886 aa8.65□□□□□ -1.02
TRAPPC13-208ENST00000505553 ONECUT3O60422 494 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC13-208ENST00000505553 MAP3K9P80192 1104 aa8.64□□□□□ -1.03
TRAPPC13-208ENST00000505553 HS6ST3Q8IZP7 471 aa8.64□□□□□ -1.03
TRAPPC13-208ENST00000505553 PLCB2Q00722 1185 aa8.63□□□□□ -1.03
TRAPPC13-208ENST00000505553 FBXW7Q969H0 707 aa8.63□□□□□ -1.03
TRAPPC13-208ENST00000505553 KIAA1468Q9P260 1216 aa8.63□□□□□ -1.03
TRAPPC13-208ENST00000505553 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
TRAPPC13-208ENST00000505553 ZNF787Q6DD87 383 aa8.62□□□□□ -1.03
TRAPPC13-208ENST00000505553 COL9A1P20849 921 aa8.61□□□□□ -1.03
TRAPPC13-208ENST00000505553 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC13-208ENST00000505553 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
TRAPPC13-208ENST00000505553 TYW1BQ6NUM6 668 aa8.6□□□□□ -1.03
TRAPPC13-208ENST00000505553 LRCH3Q96II8 777 aa8.6□□□□□ -1.03
TRAPPC13-208ENST00000505553 PRKD2Q9BZL6 878 aa8.6□□□□□ -1.03
TRAPPC13-208ENST00000505553 FAM98CQ17RN3 349 aaKnown RBP8.59□□□□□ -1.03
TRAPPC13-208ENST00000505553 HPS5Q9UPZ3 1129 aa8.59□□□□□ -1.03
TRAPPC13-208ENST00000505553 PHF14O94880 888 aa8.57□□□□□ -1.04
TRAPPC13-208ENST00000505553 CHGAP10645 457 aaKnown RBP8.57□□□□□ -1.04
TRAPPC13-208ENST00000505553 SEPT9Q9UHD8 586 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC13-208ENST00000505553 V9GY48 417 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC13-208ENST00000505553 DDX27Q96GQ7 796 aaKnown RBP8.55□□□□□ -1.04
TRAPPC13-208ENST00000505553 NCKAP5LQ9HCH0 1330 aa8.55□□□□□ -1.04
TRAPPC13-208ENST00000505553 TRIM6-TRIM34B2RNG4 842 aa8.54□□□□□ -1.04
TRAPPC13-208ENST00000505553 PPP4CP60510 307 aa8.53□□□□□ -1.04
TRAPPC13-208ENST00000505553 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
TRAPPC13-208ENST00000505553 ZNF775Q96BV0 537 aaPredicted RBP8.52□□□□□ -1.05
TRAPPC13-208ENST00000505553 EPAS1Q99814 870 aa8.52□□□□□ -1.05
TRAPPC13-208ENST00000505553 DCAF8L2P0C7V8 631 aa8.51□□□□□ -1.05
TRAPPC13-208ENST00000505553 HAP1P54257 671 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC13-208ENST00000505553 C6orf132Q5T0Z8 1188 aa8.51□□□□□ -1.05
TRAPPC13-208ENST00000505553 DNAJC5Q9H3Z4 198 aa8.51□□□□□ -1.05
TRAPPC13-208ENST00000505553 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
TRAPPC13-208ENST00000505553 TJAP1Q5JTD0 557 aa8.49□□□□□ -1.05
TRAPPC13-208ENST00000505553 PPP1R18Q6NYC8 613 aa8.49□□□□□ -1.05
TRAPPC13-208ENST00000505553 IL21Q9HBE4 155 aa8.49□□□□□ -1.05
TRAPPC13-208ENST00000505553 MFSD10Q14728 455 aa8.47□□□□□ -1.05
TRAPPC13-208ENST00000505553 PACS2Q86VP3 889 aa8.47□□□□□ -1.05
TRAPPC13-208ENST00000505553 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.47□□□□□ -1.05
TRAPPC13-208ENST00000505553 NKX1-1Q15270 411 aaPredicted RBP8.46□□□□□ -1.05
TRAPPC13-208ENST00000505553 BCANQ96GW7 911 aa8.46□□□□□ -1.05
TRAPPC13-208ENST00000505553 EMILIN3Q9NT22 766 aa8.46□□□□□ -1.05
TRAPPC13-208ENST00000505553 MTRQ99707 1265 aa8.45□□□□□ -1.06
TRAPPC13-208ENST00000505553 GGCXP38435 758 aa8.44□□□□□ -1.06
TRAPPC13-208ENST00000505553 VSIG10Q8N0Z9 540 aa8.44□□□□□ -1.06
TRAPPC13-208ENST00000505553 RBM33Q96EV2 1170 aaKnown RBP8.4□□□□□ -1.06
TRAPPC13-208ENST00000505553 SAMD7Q7Z3H4 446 aa8.39□□□□□ -1.07
TRAPPC13-208ENST00000505553 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC13-208ENST00000505553 TSKSQ9UJT2 592 aa8.37□□□□□ -1.07
TRAPPC13-208ENST00000505553 HDGFP51858 240 aaKnown RBP8.37□□□□□ -1.07
TRAPPC13-208ENST00000505553 PKDCCQ504Y2 493 aa8.37□□□□□ -1.07
TRAPPC13-208ENST00000505553 ZNF516Q92618 1163 aa8.37□□□□□ -1.07
TRAPPC13-208ENST00000505553 NECTIN2Q92692 538 aa8.37□□□□□ -1.07
TRAPPC13-208ENST00000505553 TMUB1Q9BVT8 246 aa8.37□□□□□ -1.07
TRAPPC13-208ENST00000505553 MAP3K7O43318 606 aa8.34□□□□□ -1.07
TRAPPC13-208ENST00000505553 DGAT1O75907 488 aa8.34□□□□□ -1.07
TRAPPC13-208ENST00000505553 BBXQ8WY36 941 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC13-208ENST00000505553 GTPBP6O43824 516 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC13-208ENST00000505553 EN1Q05925 392 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC13-208ENST00000505553 DDX12PQ92771 950 aa8.33□□□□□ -1.08
TRAPPC13-208ENST00000505553 NBPF26B4DH59 902 aa8.32□□□□□ -1.08
TRAPPC13-208ENST00000505553 SMAPO00193 183 aa8.31□□□□□ -1.08
TRAPPC13-208ENST00000505553 DPYSL4O14531 572 aa8.31□□□□□ -1.08
TRAPPC13-208ENST00000505553 RNF40O75150 1001 aa8.31□□□□□ -1.08
TRAPPC13-208ENST00000505553 MYT1Q01538 1121 aa8.31□□□□□ -1.08
TRAPPC13-208ENST00000505553 NKX2-3Q8TAU0 364 aa8.31□□□□□ -1.08
TRAPPC13-208ENST00000505553 CERKQ8TCT0 537 aa8.31□□□□□ -1.08
TRAPPC13-208ENST00000505553 CDCA7LQ96GN5 454 aa8.31□□□□□ -1.08
TRAPPC13-208ENST00000505553 PRSS12P56730 875 aa8.3□□□□□ -1.08
TRAPPC13-208ENST00000505553 NBR1Q14596 966 aa8.3□□□□□ -1.08
TRAPPC13-208ENST00000505553 APLP1P51693 650 aa8.29□□□□□ -1.08
TRAPPC13-208ENST00000505553 CAMK2BQ13554 666 aa8.29□□□□□ -1.08
TRAPPC13-208ENST00000505553 TSR1Q2NL82 804 aaKnown RBP8.29□□□□□ -1.08
TRAPPC13-208ENST00000505553 TREML4Q6UXN2 200 aa8.29□□□□□ -1.08
TRAPPC13-208ENST00000505553 TATDN2Q93075 761 aa8.29□□□□□ -1.08
TRAPPC13-208ENST00000505553 PNMA3Q9UL41 463 aa8.29□□□□□ -1.08
TRAPPC13-208ENST00000505553 SLC19A1P41440 591 aa8.29□□□□□ -1.08
TRAPPC13-208ENST00000505553 COPS2P61201 443 aa8.27□□□□□ -1.09
TRAPPC13-208ENST00000505553 PRR20EP86478 221 aa8.27□□□□□ -1.09
TRAPPC13-208ENST00000505553 PRR20CP86479 221 aa8.27□□□□□ -1.09
TRAPPC13-208ENST00000505553 PRR20DP86480 221 aa8.27□□□□□ -1.09
TRAPPC13-208ENST00000505553 PRR20BP86481 221 aa8.27□□□□□ -1.09
TRAPPC13-208ENST00000505553 PRR20AP86496 221 aa8.27□□□□□ -1.09
TRAPPC13-208ENST00000505553 TRIM67Q6ZTA4 783 aa8.27□□□□□ -1.09
TRAPPC13-208ENST00000505553 SLC4A3P48751 1232 aa8.26□□□□□ -1.09
TRAPPC13-208ENST00000505553 POTECB2RU33 542 aa8.25□□□□□ -1.09
TRAPPC13-208ENST00000505553 PRKCSHP14314 528 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-208ENST00000505553 PAXIP1Q6ZW49 1069 aaPredicted RBP8.25□□□□□ -1.09
TRAPPC13-208ENST00000505553 ZNF598Q86UK7 904 aaKnown RBP8.25□□□□□ -1.09
TRAPPC13-208ENST00000505553 ZPR1O75312 459 aa8.24□□□□□ -1.09
TRAPPC13-208ENST00000505553 SPRYD7Q5W111 196 aa8.24□□□□□ -1.09
TRAPPC13-208ENST00000505553 SLF2Q8IX21 1173 aa8.24□□□□□ -1.09
TRAPPC13-208ENST00000505553 FAM187AA6NFU0 413 aa8.23□□□□□ -1.09
TRAPPC13-208ENST00000505553 CFAP44Q96MT7 982 aa8.23□□□□□ -1.09
TRAPPC13-208ENST00000505553 PRR14Q9BWN1 585 aa8.23□□□□□ -1.09
TRAPPC13-208ENST00000505553 FAM198AQ9UFP1 575 aa8.23□□□□□ -1.09
TRAPPC13-208ENST00000505553 RNF223E7ERA6 249 aa8.21□□□□□ -1.09
TRAPPC13-208ENST00000505553 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms