RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TMC2Q8TDI7 906 aa5.65□□□□□ -1.5
HMGB1P22-201ENST00000505315 SSTR3P32745 418 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P22-201ENST00000505315 DSG2Q14126 1118 aa5.64□□□□□ -1.51
HMGB1P22-201ENST00000505315 BEGAINQ9BUH8 593 aa5.64□□□□□ -1.51
HMGB1P22-201ENST00000505315 REPIN1Q9BWE0 567 aaKnown RBP5.64□□□□□ -1.51
HMGB1P22-201ENST00000505315 GDPD2Q9HCC8 539 aa5.64□□□□□ -1.51
HMGB1P22-201ENST00000505315 PRM3Q9NNZ6 103 aa5.64□□□□□ -1.51
HMGB1P22-201ENST00000505315 SNRKQ9NRH2 765 aa5.64□□□□□ -1.51
HMGB1P22-201ENST00000505315 FARP1Q9Y4F1 1045 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P22-201ENST00000505315 BRD1O95696 1058 aa5.63□□□□□ -1.51
HMGB1P22-201ENST00000505315 DDX12PQ92771 950 aa5.63□□□□□ -1.51
HMGB1P22-201ENST00000505315 PUS7Q96PZ0 661 aaKnown RBP5.63□□□□□ -1.51
HMGB1P22-201ENST00000505315 GPCPD1Q9NPB8 672 aa5.63□□□□□ -1.51
HMGB1P22-201ENST00000505315 TTBK1Q5TCY1 1321 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P22-201ENST00000505315 EIF5BO60841 1220 aaKnown RBP5.62□□□□□ -1.51
HMGB1P22-201ENST00000505315 OSBPP22059 807 aa5.62□□□□□ -1.51
HMGB1P22-201ENST00000505315 GLMNQ92990 594 aa5.62□□□□□ -1.51
HMGB1P22-201ENST00000505315 RSPH4AQ5TD94 716 aa5.61□□□□□ -1.51
HMGB1P22-201ENST00000505315 BANK1Q8NDB2 785 aa5.61□□□□□ -1.51
HMGB1P22-201ENST00000505315 OXER1Q8TDS5 423 aa5.61□□□□□ -1.51
HMGB1P22-201ENST00000505315 UPF1Q92900 1129 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P22-201ENST00000505315 IVNS1ABPQ9Y6Y0 642 aa5.61□□□□□ -1.51
HMGB1P22-201ENST00000505315 PITPNM1O00562 1244 aa5.6□□□□□ -1.51
HMGB1P22-201ENST00000505315 RFC5P40937 340 aa5.6□□□□□ -1.51
HMGB1P22-201ENST00000505315 PLPP6Q8IY26 295 aa5.6□□□□□ -1.51
HMGB1P22-201ENST00000505315 PBXIP1Q96AQ6 731 aa5.6□□□□□ -1.51
HMGB1P22-201ENST00000505315 TMEM106CQ9BVX2 250 aa5.6□□□□□ -1.51
HMGB1P22-201ENST00000505315 AMOTL2Q9Y2J4 779 aa5.6□□□□□ -1.51
HMGB1P22-201ENST00000505315 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P22-201ENST00000505315 POM121CA8CG34 1229 aa5.59□□□□□ -1.51
HMGB1P22-201ENST00000505315 CLK2P49760 499 aaKnown RBP5.59□□□□□ -1.51
HMGB1P22-201ENST00000505315 TMEM259Q4ZIN3 620 aa5.59□□□□□ -1.51
HMGB1P22-201ENST00000505315 KIF12Q96FN5 646 aa5.59□□□□□ -1.51
HMGB1P22-201ENST00000505315 USTQ9Y2C2 406 aa5.59□□□□□ -1.51
HMGB1P22-201ENST00000505315 CARNS1A5YM72 827 aa5.58□□□□□ -1.52
HMGB1P22-201ENST00000505315 TBC1D12O60347 775 aa5.58□□□□□ -1.52
HMGB1P22-201ENST00000505315 PTGDRQ13258 359 aa5.58□□□□□ -1.52
HMGB1P22-201ENST00000505315 MYSM1Q5VVJ2 828 aa5.58□□□□□ -1.52
HMGB1P22-201ENST00000505315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGB1P22-201ENST00000505315 FOXK1P85037 733 aa5.56□□□□□ -1.52
HMGB1P22-201ENST00000505315 HDGFL1Q5TGJ6 251 aa5.56□□□□□ -1.52
HMGB1P22-201ENST00000505315 SND1Q7KZF4 910 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P22-201ENST00000505315 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P22-201ENST00000505315 CSPP1Q1MSJ5 1256 aa5.55□□□□□ -1.52
HMGB1P22-201ENST00000505315 MTMR14Q8NCE2 650 aa5.54□□□□□ -1.52
HMGB1P22-201ENST00000505315 NLRP7Q8WX94 980 aa5.54□□□□□ -1.52
HMGB1P22-201ENST00000505315 TBC1D2Q9BYX2 928 aa5.54□□□□□ -1.52
HMGB1P22-201ENST00000505315 VRTNQ9H8Y1 702 aa5.54□□□□□ -1.52
HMGB1P22-201ENST00000505315 FAM217BQ9NTX9 383 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P22-201ENST00000505315 TBC1D2BQ9UPU7 963 aa5.54□□□□□ -1.52
HMGB1P22-201ENST00000505315 AP1G2O75843 785 aa5.53□□□□□ -1.52
HMGB1P22-201ENST00000505315 DIXDC1Q155Q3 683 aa5.53□□□□□ -1.52
HMGB1P22-201ENST00000505315 CDCA8Q53HL2 280 aa5.53□□□□□ -1.52
HMGB1P22-201ENST00000505315 FAM177A1Q8N128 213 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P22-201ENST00000505315 TMUB1Q9BVT8 246 aa5.53□□□□□ -1.52
HMGB1P22-201ENST00000505315 G3V3G9 751 aa5.52□□□□□ -1.53
HMGB1P22-201ENST00000505315 PRKAR2AP13861 404 aaKnown RBP5.52□□□□□ -1.53
HMGB1P22-201ENST00000505315 LMOD1P29536 600 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P22-201ENST00000505315 PHOX2BQ99453 314 aa5.52□□□□□ -1.53
HMGB1P22-201ENST00000505315 UNCXA6NJT0 531 aa5.51□□□□□ -1.53
HMGB1P22-201ENST00000505315 MAP3K7O43318 606 aa5.51□□□□□ -1.53
HMGB1P22-201ENST00000505315 PRIM1P49642 420 aaKnown RBP5.51□□□□□ -1.53
HMGB1P22-201ENST00000505315 FAM161AQ3B820 660 aa5.51□□□□□ -1.53
HMGB1P22-201ENST00000505315 RIC3Q7Z5B4 369 aa5.51□□□□□ -1.53
HMGB1P22-201ENST00000505315 RBM33Q96EV2 1170 aaKnown RBP5.51□□□□□ -1.53
HMGB1P22-201ENST00000505315 C2orf72A6NCS6 295 aa5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 NUTM2BA6NNL0 878 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 NUTM2EB1AL46 878 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 PPM1GO15355 546 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 EVI5O60447 810 aa5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 PTGER2P43116 358 aa5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 NUTM2DQ5VT03 806 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 NUTM2AQ8IVF1 878 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 MICALL2Q8IY33 904 aa5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 POLR3GLQ9BT43 218 aa5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 CDHR5Q9HBB8 845 aa5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 ZRANB1Q9UGI0 708 aa5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 LIMD1Q9UGP4 676 aa5.5□□□□□ -1.53
HMGB1P22-201ENST00000505315 OATP04181 439 aa5.49□□□□□ -1.53
HMGB1P22-201ENST00000505315 B4GALNT3Q6L9W6 998 aa5.49□□□□□ -1.53
HMGB1P22-201ENST00000505315 DPY19L2Q6NUT2 758 aa5.49□□□□□ -1.53
HMGB1P22-201ENST00000505315 PPP1R12CQ9BZL4 782 aa5.49□□□□□ -1.53
HMGB1P22-201ENST00000505315 CFAP70Q5T0N1 1121 aa5.48□□□□□ -1.53
HMGB1P22-201ENST00000505315 NUTM1Q86Y26 1132 aa5.48□□□□□ -1.53
HMGB1P22-201ENST00000505315 ZNF710Q8N1W2 664 aa5.48□□□□□ -1.53
HMGB1P22-201ENST00000505315 MRRFQ96E11 262 aaKnown RBP5.48□□□□□ -1.53
HMGB1P22-201ENST00000505315 PHF12Q96QT6 1004 aa5.48□□□□□ -1.53
HMGB1P22-201ENST00000505315 CHMP4AQ9BY43 222 aa5.48□□□□□ -1.53
HMGB1P22-201ENST00000505315 PALM3A6NDB9 673 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P22-201ENST00000505315 CACNB1Q02641 598 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P22-201ENST00000505315 WASHC4Q2M389 1173 aa5.47□□□□□ -1.53
HMGB1P22-201ENST00000505315 FBXO31Q5XUX0 539 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P22-201ENST00000505315 PPP2R2DQ66LE6 453 aa5.47□□□□□ -1.53
HMGB1P22-201ENST00000505315 CCER1Q8TC90 406 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P22-201ENST00000505315 PPP1R1BQ9UD71 204 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P22-201ENST00000505315 NDUFB9Q9Y6M9 179 aa5.47□□□□□ -1.53
HMGB1P22-201ENST00000505315 RBM47A0AV96 593 aaKnown RBP5.46□□□□□ -1.54
HMGB1P22-201ENST00000505315 VAC14Q08AM6 782 aa5.46□□□□□ -1.54
HMGB1P22-201ENST00000505315 METTL3Q86U44 580 aaKnown RBP5.46□□□□□ -1.54
HMGB1P22-201ENST00000505315 USP17L8P0C7I0 530 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms