RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CDCA7LQ96GN5 454 aa15.92■□□□□ 0.14
UBE3D-206ENST00000505226 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
UBE3D-206ENST00000505226 HNRNPMP52272 730 aaKnown RBP eCLIP15.91■□□□□ 0.14
UBE3D-206ENST00000505226 KDM5DQ9BY66 1539 aa15.91■□□□□ 0.14
UBE3D-206ENST00000505226 PTPRGP23470 1445 aa15.9■□□□□ 0.14
UBE3D-206ENST00000505226 PER1O15534 1290 aaPredicted RBP15.9■□□□□ 0.14
UBE3D-206ENST00000505226 PARD3Q8TEW0 1356 aa15.89■□□□□ 0.14
UBE3D-206ENST00000505226 SHANK2Q9UPX8 1470 aa15.89■□□□□ 0.13
UBE3D-206ENST00000505226 NBPF1Q3BBV0 1214 aa15.89■□□□□ 0.13
UBE3D-206ENST00000505226 KTN1Q86UP2 1357 aaKnown RBP15.89■□□□□ 0.13
UBE3D-206ENST00000505226 CHMP7Q8WUX9 453 aaPredicted RBP15.89■□□□□ 0.13
UBE3D-206ENST00000505226 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
UBE3D-206ENST00000505226 PLEKHD1A6NEE1 506 aa15.88■□□□□ 0.13
UBE3D-206ENST00000505226 FBLN2P98095 1184 aa15.88■□□□□ 0.13
UBE3D-206ENST00000505226 ATP10BO94823 1461 aa15.87■□□□□ 0.13
UBE3D-206ENST00000505226 NPM2Q86SE8 214 aaKnown RBP15.87■□□□□ 0.13
UBE3D-206ENST00000505226 NLRP13Q86W25 1043 aa15.87■□□□□ 0.13
UBE3D-206ENST00000505226 SKAP1Q86WV1 359 aa15.87■□□□□ 0.13
UBE3D-206ENST00000505226 MAGI1Q96QZ7 1491 aaPredicted RBP15.87■□□□□ 0.13
UBE3D-206ENST00000505226 TSPY4P0CV99 314 aa15.86■□□□□ 0.13
UBE3D-206ENST00000505226 TSPY10P0CW01 314 aa15.86■□□□□ 0.13
UBE3D-206ENST00000505226 PLIN1O60240 522 aa15.86■□□□□ 0.13
UBE3D-206ENST00000505226 PDE4AP27815 886 aa15.86■□□□□ 0.13
UBE3D-206ENST00000505226 ABCA8O94911 1581 aa15.85■□□□□ 0.13
UBE3D-206ENST00000505226 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
UBE3D-206ENST00000505226 RGL3Q3MIN7 710 aa15.85■□□□□ 0.13
UBE3D-206ENST00000505226 TRPM1Q7Z4N2 1603 aa15.84■□□□□ 0.13
UBE3D-206ENST00000505226 TCERG1O14776 1098 aaKnown RBP15.84■□□□□ 0.13
UBE3D-206ENST00000505226 BACH2Q9BYV9 841 aa15.83■□□□□ 0.13
UBE3D-206ENST00000505226 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
UBE3D-206ENST00000505226 CC2D1BQ5T0F9 858 aaKnown RBP15.83■□□□□ 0.12
UBE3D-206ENST00000505226 FAM135AQ9P2D6 1515 aa15.83■□□□□ 0.12
UBE3D-206ENST00000505226 CARMIL2Q6F5E8 1435 aa15.82■□□□□ 0.12
UBE3D-206ENST00000505226 DISP3Q9P2K9 1392 aa15.82■□□□□ 0.12
UBE3D-206ENST00000505226 PLA2R1Q13018 1463 aa15.82■□□□□ 0.12
UBE3D-206ENST00000505226 TESK2Q96S53 571 aa15.82■□□□□ 0.12
UBE3D-206ENST00000505226 PDE3BQ13370 1112 aa15.81■□□□□ 0.12
UBE3D-206ENST00000505226 NUP160Q12769 1436 aa15.8■□□□□ 0.12
UBE3D-206ENST00000505226 ARHGEF5Q12774 1597 aa15.79■□□□□ 0.12
UBE3D-206ENST00000505226 A2MP01023 1474 aa15.78■□□□□ 0.12
UBE3D-206ENST00000505226 RTL5Q5HYW3 569 aaPredicted RBP15.78■□□□□ 0.12
UBE3D-206ENST00000505226 PANK3Q9H999 370 aa15.78■□□□□ 0.12
UBE3D-206ENST00000505226 LAS1LQ9Y4W2 734 aaKnown RBP15.78■□□□□ 0.12
UBE3D-206ENST00000505226 CCDC144AA2RUR9 1427 aa15.78■□□□□ 0.12
UBE3D-206ENST00000505226 GPRASP1Q5JY77 1395 aa15.78■□□□□ 0.12
UBE3D-206ENST00000505226 CRBNQ96SW2 442 aa15.78■□□□□ 0.12
UBE3D-206ENST00000505226 SAMD9LQ8IVG5 1584 aa15.78■□□□□ 0.12
UBE3D-206ENST00000505226 COL17A1Q9UMD9 1497 aaPredicted RBP15.78■□□□□ 0.12
UBE3D-206ENST00000505226 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.12
UBE3D-206ENST00000505226 C20orf194Q5TEA3 1177 aa15.77■□□□□ 0.12
UBE3D-206ENST00000505226 MS4A1P11836 297 aa15.76■□□□□ 0.11
UBE3D-206ENST00000505226 CDC42BPBQ9Y5S2 1711 aa15.75■□□□□ 0.11
UBE3D-206ENST00000505226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
UBE3D-206ENST00000505226 CCDC141Q6ZP82 1450 aa15.75■□□□□ 0.11
UBE3D-206ENST00000505226 PRDM15P57071 1507 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-206ENST00000505226 ADAMTS8Q9UP79 889 aa15.72■□□□□ 0.11
UBE3D-206ENST00000505226 ERBINQ96RT1 1412 aa15.72■□□□□ 0.11
UBE3D-206ENST00000505226 WASHC2CQ9Y4E1 1318 aa15.72■□□□□ 0.11
UBE3D-206ENST00000505226 NEFMP07197 916 aa15.72■□□□□ 0.11
UBE3D-206ENST00000505226 MYO5CQ9NQX4 1742 aa15.7■□□□□ 0.1
UBE3D-206ENST00000505226 ZMYM4Q5VZL5 1548 aa15.7■□□□□ 0.1
UBE3D-206ENST00000505226 INSRP06213 1382 aa15.7■□□□□ 0.1
UBE3D-206ENST00000505226 IL27Q8NEV9 243 aa15.69■□□□□ 0.1
UBE3D-206ENST00000505226 SYCP2Q9BX26 1530 aa15.69■□□□□ 0.1
UBE3D-206ENST00000505226 LAMC1P11047 1609 aa15.69■□□□□ 0.1
UBE3D-206ENST00000505226 PREX2Q70Z35 1606 aa15.69■□□□□ 0.1
UBE3D-206ENST00000505226 UNC13BO14795 1591 aa15.69■□□□□ 0.1
UBE3D-206ENST00000505226 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
UBE3D-206ENST00000505226 PLEKHH2Q8IVE3 1493 aa15.68■□□□□ 0.1
UBE3D-206ENST00000505226 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
UBE3D-206ENST00000505226 MAGI2Q86UL8 1455 aa15.68■□□□□ 0.1
UBE3D-206ENST00000505226 TMF1P82094 1093 aa15.67■□□□□ 0.1
UBE3D-206ENST00000505226 DUSP27Q5VZP5 1158 aa15.66■□□□□ 0.1
UBE3D-206ENST00000505226 WDR7Q9Y4E6 1490 aa15.66■□□□□ 0.1
UBE3D-206ENST00000505226 SLC4A3P48751 1232 aa15.65■□□□□ 0.1
UBE3D-206ENST00000505226 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
UBE3D-206ENST00000505226 RSPH4AQ5TD94 716 aa15.65■□□□□ 0.1
UBE3D-206ENST00000505226 PPP2R1AP30153 589 aa15.64■□□□□ 0.09
UBE3D-206ENST00000505226 TTC37Q6PGP7 1564 aa15.64■□□□□ 0.09
UBE3D-206ENST00000505226 IQGAP3Q86VI3 1631 aa15.64■□□□□ 0.09
UBE3D-206ENST00000505226 USP35Q9P2H5 1018 aa15.63■□□□□ 0.09
UBE3D-206ENST00000505226 ZNF521Q96K83 1311 aa15.63■□□□□ 0.09
UBE3D-206ENST00000505226 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
UBE3D-206ENST00000505226 MAST1Q9Y2H9 1570 aa15.62■□□□□ 0.09
UBE3D-206ENST00000505226 ARHGAP5Q13017 1502 aa15.61■□□□□ 0.09
UBE3D-206ENST00000505226 EIF2AK4Q9P2K8 1649 aaKnown RBP15.61■□□□□ 0.09
UBE3D-206ENST00000505226 RNF17Q9BXT8 1623 aaKnown RBP15.61■□□□□ 0.09
UBE3D-206ENST00000505226 ATP10AO60312 1499 aa15.6■□□□□ 0.09
UBE3D-206ENST00000505226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.6■□□□□ 0.09
UBE3D-206ENST00000505226 PPM1GO15355 546 aaPredicted RBP15.6■□□□□ 0.09
UBE3D-206ENST00000505226 C8orf34Q49A92 452 aa15.6■□□□□ 0.09
UBE3D-206ENST00000505226 SPINK5Q9NQ38 1064 aaPredicted RBP15.6■□□□□ 0.09
UBE3D-206ENST00000505226 RTN4Q9NQC3 1192 aaKnown RBP15.59■□□□□ 0.09
UBE3D-206ENST00000505226 KNSTRNQ9Y448 316 aa15.58■□□□□ 0.09
UBE3D-206ENST00000505226 CENPQQ7L2Z9 268 aaPredicted RBP15.58■□□□□ 0.08
UBE3D-206ENST00000505226 PLXNC1O60486 1568 aa15.58■□□□□ 0.08
UBE3D-206ENST00000505226 GOLGA2Q08379 1002 aa15.57■□□□□ 0.08
UBE3D-206ENST00000505226 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
UBE3D-206ENST00000505226 DDRGK1Q96HY6 314 aa15.57■□□□□ 0.08
UBE3D-206ENST00000505226 CCDC146Q8IYE0 955 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms