RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 C6orf132Q5T0Z8 1188 aa13.03□□□□□ -0.32
TRAPPC13-207ENST00000505108 MARVELD3Q96A59 401 aa13.03□□□□□ -0.32
TRAPPC13-207ENST00000505108 PSDA5PKW4 1024 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC13-207ENST00000505108 GNPATO15228 680 aa13□□□□□ -0.33
TRAPPC13-207ENST00000505108 HIC1Q14526 733 aa13□□□□□ -0.33
TRAPPC13-207ENST00000505108 LCE2DQ5TA82 110 aaPredicted RBP13□□□□□ -0.33
TRAPPC13-207ENST00000505108 KRI1Q8N9T8 703 aaKnown RBP12.98□□□□□ -0.33
TRAPPC13-207ENST00000505108 BCL2L12Q9HB09 334 aa12.98□□□□□ -0.33
TRAPPC13-207ENST00000505108 ERBB3P21860 1342 aa12.97□□□□□ -0.33
TRAPPC13-207ENST00000505108 EMP3P54852 163 aa12.97□□□□□ -0.33
TRAPPC13-207ENST00000505108 VARS2Q5ST30 1063 aaKnown RBP12.96□□□□□ -0.33
TRAPPC13-207ENST00000505108 COL9A1P20849 921 aa12.95□□□□□ -0.34
TRAPPC13-207ENST00000505108 POTEB3A0JP26 581 aa12.92□□□□□ -0.34
TRAPPC13-207ENST00000505108 FAM205CA6NFA0 338 aa12.92□□□□□ -0.34
TRAPPC13-207ENST00000505108 MAP2K5Q13163 448 aa12.92□□□□□ -0.34
TRAPPC13-207ENST00000505108 POTEBQ6S5H4 581 aa12.92□□□□□ -0.34
TRAPPC13-207ENST00000505108 MINK1Q8N4C8 1332 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC13-207ENST00000505108 IRF6O14896 467 aa12.91□□□□□ -0.34
TRAPPC13-207ENST00000505108 PTPREP23469 700 aa12.91□□□□□ -0.34
TRAPPC13-207ENST00000505108 AK7Q96M32 723 aa12.91□□□□□ -0.34
TRAPPC13-207ENST00000505108 POTEEQ6S8J3 1075 aa12.9□□□□□ -0.34
TRAPPC13-207ENST00000505108 CERKQ8TCT0 537 aa12.9□□□□□ -0.34
TRAPPC13-207ENST00000505108 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
TRAPPC13-207ENST00000505108 KCNK17Q96T54 332 aa12.9□□□□□ -0.34
TRAPPC13-207ENST00000505108 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
TRAPPC13-207ENST00000505108 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
TRAPPC13-207ENST00000505108 TRIM66O15016 1216 aa12.87□□□□□ -0.35
TRAPPC13-207ENST00000505108 PSEN2P49810 448 aa12.87□□□□□ -0.35
TRAPPC13-207ENST00000505108 PRSS12P56730 875 aa12.87□□□□□ -0.35
TRAPPC13-207ENST00000505108 FAM161AQ3B820 660 aa12.87□□□□□ -0.35
TRAPPC13-207ENST00000505108 TTC13Q8NBP0 860 aa12.87□□□□□ -0.35
TRAPPC13-207ENST00000505108 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
TRAPPC13-207ENST00000505108 HS3ST6Q96QI5 342 aa12.86□□□□□ -0.35
TRAPPC13-207ENST00000505108 FAM198AQ9UFP1 575 aa12.86□□□□□ -0.35
TRAPPC13-207ENST00000505108 AXIN2Q9Y2T1 843 aa12.86□□□□□ -0.35
TRAPPC13-207ENST00000505108 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC13-207ENST00000505108 ZNF687Q8N1G0 1237 aa12.83□□□□□ -0.36
TRAPPC13-207ENST00000505108 RBM27Q9P2N5 1060 aaKnown RBP12.83□□□□□ -0.36
TRAPPC13-207ENST00000505108 TSKSQ9UJT2 592 aa12.83□□□□□ -0.36
TRAPPC13-207ENST00000505108 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
TRAPPC13-207ENST00000505108 PROX2Q3B8N5 592 aa12.81□□□□□ -0.36
TRAPPC13-207ENST00000505108 DMRTA1Q5VZB9 504 aa12.81□□□□□ -0.36
TRAPPC13-207ENST00000505108 ADGRG1Q9Y653 693 aa12.81□□□□□ -0.36
TRAPPC13-207ENST00000505108 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
TRAPPC13-207ENST00000505108 PHOX2BQ99453 314 aa12.8□□□□□ -0.36
TRAPPC13-207ENST00000505108 PDE4DQ08499 809 aa12.79□□□□□ -0.36
TRAPPC13-207ENST00000505108 ZBED2Q9BTP6 218 aa12.79□□□□□ -0.36
TRAPPC13-207ENST00000505108 TRIM6-TRIM34B2RNG4 842 aa12.78□□□□□ -0.36
TRAPPC13-207ENST00000505108 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
TRAPPC13-207ENST00000505108 KCNH8Q96L42 1107 aa12.77□□□□□ -0.37
TRAPPC13-207ENST00000505108 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC13-207ENST00000505108 PBX2P40425 430 aa12.76□□□□□ -0.37
TRAPPC13-207ENST00000505108 AMHR2Q16671 573 aa12.76□□□□□ -0.37
TRAPPC13-207ENST00000505108 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
TRAPPC13-207ENST00000505108 PXYLP1Q8TE99 480 aa12.74□□□□□ -0.37
TRAPPC13-207ENST00000505108 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
TRAPPC13-207ENST00000505108 OATP04181 439 aa12.73□□□□□ -0.37
TRAPPC13-207ENST00000505108 PARP9Q8IXQ6 854 aa12.72□□□□□ -0.37
TRAPPC13-207ENST00000505108 NUDT18Q6ZVK8 323 aa12.71□□□□□ -0.37
TRAPPC13-207ENST00000505108 TATDN2Q93075 761 aa12.71□□□□□ -0.37
TRAPPC13-207ENST00000505108 EYA1Q99502 592 aa12.71□□□□□ -0.37
TRAPPC13-207ENST00000505108 REPIN1Q9BWE0 567 aaKnown RBP12.71□□□□□ -0.37
TRAPPC13-207ENST00000505108 KIAA1468Q9P260 1216 aa12.71□□□□□ -0.37
TRAPPC13-207ENST00000505108 SMAPO00193 183 aa12.7□□□□□ -0.38
TRAPPC13-207ENST00000505108 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC13-207ENST00000505108 PACS2Q86VP3 889 aa12.7□□□□□ -0.38
TRAPPC13-207ENST00000505108 SLC4A5Q9BY07 1137 aa12.7□□□□□ -0.38
TRAPPC13-207ENST00000505108 KDM4CQ9H3R0 1056 aa12.7□□□□□ -0.38
TRAPPC13-207ENST00000505108 VPS9D1Q9Y2B5 631 aa12.7□□□□□ -0.38
TRAPPC13-207ENST00000505108 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
TRAPPC13-207ENST00000505108 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
TRAPPC13-207ENST00000505108 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
TRAPPC13-207ENST00000505108 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC13-207ENST00000505108 TTLL12Q14166 644 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC13-207ENST00000505108 TMUB1Q9BVT8 246 aa12.68□□□□□ -0.38
TRAPPC13-207ENST00000505108 RABGEF1Q9UJ41 708 aa12.66□□□□□ -0.38
TRAPPC13-207ENST00000505108 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
TRAPPC13-207ENST00000505108 LSM11P83369 360 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAPPC13-207ENST00000505108 GIGYF2Q6Y7W6 1299 aaKnown RBP12.64□□□□□ -0.39
TRAPPC13-207ENST00000505108 SEPT9Q9UHD8 586 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC13-207ENST00000505108 CLCN1P35523 988 aa12.62□□□□□ -0.39
TRAPPC13-207ENST00000505108 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
TRAPPC13-207ENST00000505108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.61□□□□□ -0.39
TRAPPC13-207ENST00000505108 TK2O00142 265 aa12.61□□□□□ -0.39
TRAPPC13-207ENST00000505108 ADGRD1Q6QNK2 874 aa12.61□□□□□ -0.39
TRAPPC13-207ENST00000505108 KRTAP3-3Q9BYR6 98 aa12.61□□□□□ -0.39
TRAPPC13-207ENST00000505108 KRTAP3-2Q9BYR7 98 aa12.61□□□□□ -0.39
TRAPPC13-207ENST00000505108 BHMG1C9JSJ3 638 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC13-207ENST00000505108 MS4A1P11836 297 aa12.6□□□□□ -0.39
TRAPPC13-207ENST00000505108 POTEGQ6S5H5 508 aa12.6□□□□□ -0.39
TRAPPC13-207ENST00000505108 FAM117AQ9C073 453 aa12.6□□□□□ -0.39
TRAPPC13-207ENST00000505108 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
TRAPPC13-207ENST00000505108 DNAJB2P25686 324 aa12.58□□□□□ -0.4
TRAPPC13-207ENST00000505108 POTEMA6NI47 508 aa12.57□□□□□ -0.4
TRAPPC13-207ENST00000505108 IL27Q8NEV9 243 aa12.57□□□□□ -0.4
TRAPPC13-207ENST00000505108 TMEM134Q9H6X4 195 aa12.57□□□□□ -0.4
TRAPPC13-207ENST00000505108 FAM217BQ9NTX9 383 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC13-207ENST00000505108 HRO43593 1189 aa12.56□□□□□ -0.4
TRAPPC13-207ENST00000505108 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC13-207ENST00000505108 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms